Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_pT_I17
(867 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 339 1e-93
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 339 1e-93
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 339 1e-93
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 100 2e-21
AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditi... 61 9e-10
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 57 1e-08
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 57 1e-08
L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding pro... 57 2e-08
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 52 4e-07
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 52 4e-07
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 52 4e-07
Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical pr... 40 0.002
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 40 0.003
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 40 0.003
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 32 0.61
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 32 0.61
Z81076-4|CAB03053.1| 172|Caenorhabditis elegans Hypothetical pr... 31 1.4
U97191-1|AAB52432.1| 805|Caenorhabditis elegans Nuclear pore co... 30 2.5
AF039711-8|ABS19466.1| 766|Caenorhabditis elegans Hypothetical ... 30 2.5
Z78064-8|CAO82042.1| 357|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z19158-2|CAA79571.3| 262|Caenorhabditis elegans Hypothetical pr... 29 4.3
AL033514-38|CAA22111.2| 341|Caenorhabditis elegans Hypothetical... 29 4.3
U41007-15|AAQ01538.1| 564|Caenorhabditis elegans Kinesin-like p... 28 7.5
U41007-14|AAA82277.1| 690|Caenorhabditis elegans Kinesin-like p... 28 7.5
AB023577-1|BAB82459.1| 690|Caenorhabditis elegans Kinesin like ... 28 7.5
AL132864-2|CAB60592.1| 201|Caenorhabditis elegans Hypothetical ... 28 9.9
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 339 bits (834), Expect = 1e-93
Identities = 156/199 (78%), Positives = 175/199 (87%)
Frame = -1
Query: 867 DKPXRLPLQDVYQIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEA 688
D+P RLPLQDVY+IGGIGTVPVGRVETG++KPG +V FAP N+TTEVKSVEMHHE+L EA
Sbjct: 209 DRPLRLPLQDVYKIGGIGTVPVGRVETGIIKPGMVVTFAPQNVTTEVKSVEMHHESLPEA 268
Query: 687 VPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLD 508
VPGDNVGFNVKNVSVK++RRG V DSK +P K A F AQVI++NHPGQISNGYTPVLD
Sbjct: 269 VPGDNVGFNVKNVSVKDIRRGSVCSDSKQDPAKEARTFHAQVIIMNHPGQISNGYTPVLD 328
Query: 507 CHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLG 328
CHTAHIACKF E+KEKVDRRTGK E PK +KSGDA IV L+P+KPLCVESF ++ PLG
Sbjct: 329 CHTAHIACKFNELKEKVDRRTGKKVEDFPKFLKSGDAGIVELIPTKPLCVESFTDYAPLG 388
Query: 327 RFAVRDMRQTVAVGVIKAV 271
RFAVRDMRQTVAVGVIK+V
Sbjct: 389 RFAVRDMRQTVAVGVIKSV 407
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 339 bits (834), Expect = 1e-93
Identities = 156/199 (78%), Positives = 175/199 (87%)
Frame = -1
Query: 867 DKPXRLPLQDVYQIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEA 688
D+P RLPLQDVY+IGGIGTVPVGRVETG++KPG +V FAP N+TTEVKSVEMHHE+L EA
Sbjct: 243 DRPLRLPLQDVYKIGGIGTVPVGRVETGIIKPGMVVTFAPQNVTTEVKSVEMHHESLPEA 302
Query: 687 VPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLD 508
VPGDNVGFNVKNVSVK++RRG V DSK +P K A F AQVI++NHPGQISNGYTPVLD
Sbjct: 303 VPGDNVGFNVKNVSVKDIRRGSVCSDSKQDPAKEARTFHAQVIIMNHPGQISNGYTPVLD 362
Query: 507 CHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLG 328
CHTAHIACKF E+KEKVDRRTGK E PK +KSGDA IV L+P+KPLCVESF ++ PLG
Sbjct: 363 CHTAHIACKFNELKEKVDRRTGKKVEDFPKFLKSGDAGIVELIPTKPLCVESFTDYAPLG 422
Query: 327 RFAVRDMRQTVAVGVIKAV 271
RFAVRDMRQTVAVGVIK+V
Sbjct: 423 RFAVRDMRQTVAVGVIKSV 441
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 339 bits (834), Expect = 1e-93
Identities = 156/199 (78%), Positives = 175/199 (87%)
Frame = -1
Query: 867 DKPXRLPLQDVYQIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEA 688
D+P RLPLQDVY+IGGIGTVPVGRVETG++KPG +V FAP N+TTEVKSVEMHHE+L EA
Sbjct: 243 DRPLRLPLQDVYKIGGIGTVPVGRVETGIIKPGMVVTFAPQNVTTEVKSVEMHHESLPEA 302
Query: 687 VPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLD 508
VPGDNVGFNVKNVSVK++RRG V DSK +P K A F AQVI++NHPGQISNGYTPVLD
Sbjct: 303 VPGDNVGFNVKNVSVKDIRRGSVCSDSKQDPAKEARTFHAQVIIMNHPGQISNGYTPVLD 362
Query: 507 CHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLG 328
CHTAHIACKF E+KEKVDRRTGK E PK +KSGDA IV L+P+KPLCVESF ++ PLG
Sbjct: 363 CHTAHIACKFNELKEKVDRRTGKKVEDFPKFLKSGDAGIVELIPTKPLCVESFTDYAPLG 422
Query: 327 RFAVRDMRQTVAVGVIKAV 271
RFAVRDMRQTVAVGVIK+V
Sbjct: 423 RFAVRDMRQTVAVGVIKSV 441
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 100 bits (239), Expect = 2e-21
Identities = 60/198 (30%), Positives = 104/198 (52%), Gaps = 1/198 (0%)
Frame = -1
Query: 861 PXRLPLQDVYQIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVP 682
P R + + Y +GTV +G++E+G ++ G +V P +V + + V
Sbjct: 339 PVRCTVAEKYS--EMGTVIIGKMESGCVQKGDTLVVMPNKQPVQVLQIWADDVETERVVA 396
Query: 681 GDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCH 502
GDN+ F +K + EL+ G++ S ++ K F A+V+VL H I++GY+ VL
Sbjct: 397 GDNIKFKLKGIEENELQGGFIIC-SPDSLAKTGRVFDAEVLVLEHRSIIASGYSCVLHIQ 455
Query: 501 TAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPLGRF 322
+A + +D++TG+ K +K + I+ L +P +E F+E+P LGRF
Sbjct: 456 SAVEEVTVKGVIATIDKKTGEKKRA--KFVKQDEKCIMRLESPEPFVLEPFKEYPYLGRF 513
Query: 321 AVRDMRQTVAVG-VIKAV 271
+RD +T+A+G V+K V
Sbjct: 514 TLRDEGKTIAIGKVLKVV 531
>AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditis
gtp-binding proteinprotein 1 protein.
Length = 613
Score = 61.3 bits (142), Expect = 9e-10
Identities = 38/155 (24%), Positives = 71/155 (45%), Gaps = 4/155 (2%)
Frame = -1
Query: 861 PXRLPLQDVYQIGGIGTVPVGRVETGVLKPGTIVVFAPAN----ITTEVKSVEMHHEALQ 694
P + D+Y + G+GT+ G + +G ++ I++ P + + +KS+ +
Sbjct: 372 PAHFQIDDIYWVDGVGTIASGTLLSGTIRLNDILLLGPTSNGDFMPIPIKSIHRKRMPVG 431
Query: 693 EAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPV 514
G + F +K + K++R+G V D K P F A+++VL+HP I Y +
Sbjct: 432 IVKCGQSASFALKKIPKKDVRKGMVLVDPKVKPVASMV-FEAEILVLHHPTTIKPNYQAM 490
Query: 513 LDCHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIK 409
L + + ++V RTG +V K I+
Sbjct: 491 LHIGSVRQTATLVSMGKEV-LRTGDRDKVQFKFIR 524
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 57.2 bits (132), Expect = 1e-08
Identities = 39/200 (19%), Positives = 86/200 (43%), Gaps = 1/200 (0%)
Frame = -1
Query: 867 DKPXRLPLQDVYQIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEA 688
D P R+ + DV ++ V G++E+G ++ V+ +++T +++ +
Sbjct: 390 DGPLRIGISDVLKVASNQLVVSGKIESGEVEKDD-KVYIMSSVTAATVKECANNDGSRHC 448
Query: 687 VPGDNVGFNVKNVSVKE-LRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVL 511
GD + ++ E ++ G V + + + F +++ I G L
Sbjct: 449 FAGDYILLTLQGTFEPESIQTGSVVVRAGPDTLIPSKKFEVRLVAFEIAMPIIKGAKAEL 508
Query: 510 DCHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPL 331
H+ + C F + +++ G+ + P+ I G +A+V + + +E+F L
Sbjct: 509 YAHSLCVPCTFTNLLYTINKSNGEILKKGPRFIAKGASAVVEIETEYDIAIETFTSCRAL 568
Query: 330 GRFAVRDMRQTVAVGVIKAV 271
GR R T+A G+++ V
Sbjct: 569 GRVTFRAGGNTIAAGIVEKV 588
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical protein
K07A12.4a protein.
Length = 610
Score = 57.2 bits (132), Expect = 1e-08
Identities = 39/200 (19%), Positives = 86/200 (43%), Gaps = 1/200 (0%)
Frame = -1
Query: 867 DKPXRLPLQDVYQIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEA 688
D P R+ + DV ++ V G++E+G ++ V+ +++T +++ +
Sbjct: 408 DGPLRIGISDVLKVASNQLVVSGKIESGEVEKDD-KVYIMSSVTAATVKECANNDGSRHC 466
Query: 687 VPGDNVGFNVKNVSVKE-LRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVL 511
GD + ++ E ++ G V + + + F +++ I G L
Sbjct: 467 FAGDYILLTLQGTFEPESIQTGSVVVRAGPDTLIPSKKFEVRLVAFEIAMPIIKGAKAEL 526
Query: 510 DCHTAHIACKFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVESFQEFPPL 331
H+ + C F + +++ G+ + P+ I G +A+V + + +E+F L
Sbjct: 527 YAHSLCVPCTFTNLLYTINKSNGEILKKGPRFIAKGASAVVEIETEYDIAIETFTSCRAL 586
Query: 330 GRFAVRDMRQTVAVGVIKAV 271
GR R T+A G+++ V
Sbjct: 587 GRVTFRAGGNTIAAGIVEKV 606
>L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding
protein protein.
Length = 593
Score = 56.8 bits (131), Expect = 2e-08
Identities = 31/121 (25%), Positives = 58/121 (47%), Gaps = 4/121 (3%)
Frame = -1
Query: 861 PXRLPLQDVYQIGGIGTVPVGRVETGVLKPGTIVVFAPAN----ITTEVKSVEMHHEALQ 694
P + D+Y + G+GT+ G + +G ++ I++ P + + +KS+ +
Sbjct: 373 PAHFQIDDIYWVDGVGTIASGTLLSGTIRLNDILLLGPTSNGDFMPIPIKSIHRKRCLVG 432
Query: 693 EAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPV 514
G + F +K + K++R+G V D K P F A+++VL+HP I Y +
Sbjct: 433 IVKCGQSASFALKKIPKKDVRQGMVLVDPKVKPVASMV-FEAEILVLHHPTTIKPNYQAM 491
Query: 513 L 511
L
Sbjct: 492 L 492
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 52.4 bits (120), Expect = 4e-07
Identities = 54/197 (27%), Positives = 87/197 (44%), Gaps = 6/197 (3%)
Frame = -1
Query: 843 QDVYQIGGIGTVPVGRVETGVLKPGT-IVVFAPANITTEVKSV----EMHHEALQEAVPG 679
+ VY I G GTV G++E G+LK G I + T VKSV E + + +A PG
Sbjct: 257 EHVYSIVGRGTVITGKLERGILKRGDKIEIVGGTKDGTTVKSVISGLESFRKTVDQAEPG 316
Query: 678 DNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHT 499
D +G ++ + K++RRG V + + K AQ+ VL TP+ + +
Sbjct: 317 DQLGVLLRGLGPKDVRRGCVL-LPQGHKHKVTDKVKAQLYVLKE--SEGGAKTPIANYFS 373
Query: 498 AHIACKFAEIKEKVDRRTGKSTEVNPKS-IKSGDAAIVNLVPSKPLCVESFQEFPPLGRF 322
H+ + +G S + K + G++A V L + + +E P RF
Sbjct: 374 EHVF--------SLTWDSGASVRIIGKDFVMPGESAEVELSLNSQMFIE------PQQRF 419
Query: 321 AVRDMRQTVAVGVIKAV 271
+R +T+ GV V
Sbjct: 420 TIRKGAKTIGTGVFTDV 436
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 52.4 bits (120), Expect = 4e-07
Identities = 54/197 (27%), Positives = 87/197 (44%), Gaps = 6/197 (3%)
Frame = -1
Query: 843 QDVYQIGGIGTVPVGRVETGVLKPGT-IVVFAPANITTEVKSV----EMHHEALQEAVPG 679
+ VY I G GTV G++E G+LK G I + T VKSV E + + +A PG
Sbjct: 258 EHVYSIVGRGTVITGKLERGILKRGDKIEIVGGTKDGTTVKSVISGLESFRKTVDQAEPG 317
Query: 678 DNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHT 499
D +G ++ + K++RRG V + + K AQ+ VL TP+ + +
Sbjct: 318 DQLGVLLRGLGPKDVRRGCVL-LPQGHKHKVTDKVKAQLYVLKE--SEGGAKTPIANYFS 374
Query: 498 AHIACKFAEIKEKVDRRTGKSTEVNPKS-IKSGDAAIVNLVPSKPLCVESFQEFPPLGRF 322
H+ + +G S + K + G++A V L + + +E P RF
Sbjct: 375 EHVF--------SLTWDSGASVRIIGKDFVMPGESAEVELSLNSQMFIE------PQQRF 420
Query: 321 AVRDMRQTVAVGVIKAV 271
+R +T+ GV V
Sbjct: 421 TIRKGAKTIGTGVFTDV 437
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 52.4 bits (120), Expect = 4e-07
Identities = 54/197 (27%), Positives = 87/197 (44%), Gaps = 6/197 (3%)
Frame = -1
Query: 843 QDVYQIGGIGTVPVGRVETGVLKPGT-IVVFAPANITTEVKSV----EMHHEALQEAVPG 679
+ VY I G GTV G++E G+LK G I + T VKSV E + + +A PG
Sbjct: 258 EHVYSIVGRGTVITGKLERGILKRGDKIEIVGGTKDGTTVKSVISGLESFRKTVDQAEPG 317
Query: 678 DNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNHPGQISNGYTPVLDCHT 499
D +G ++ + K++RRG V + + K AQ+ VL TP+ + +
Sbjct: 318 DQLGVLLRGLGPKDVRRGCVL-LPQGHKHKVTDKVKAQLYVLKE--SEGGAKTPIANYFS 374
Query: 498 AHIACKFAEIKEKVDRRTGKSTEVNPKS-IKSGDAAIVNLVPSKPLCVESFQEFPPLGRF 322
H+ + +G S + K + G++A V L + + +E P RF
Sbjct: 375 EHVF--------SLTWDSGASVRIIGKDFVMPGESAEVELSLNSQMFIE------PQQRF 420
Query: 321 AVRDMRQTVAVGVIKAV 271
+R +T+ GV V
Sbjct: 421 TIRKGAKTIGTGVFTDV 437
>Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical
protein T04H1.2 protein.
Length = 588
Score = 39.9 bits (89), Expect = 0.002
Identities = 28/109 (25%), Positives = 48/109 (44%), Gaps = 4/109 (3%)
Frame = -1
Query: 861 PXRLPLQDVYQIGGIGTVPVGRVETGVLKPGTIVVFAPANITT----EVKSVEMHHEALQ 694
P ++++Y + +G V G + G L G V+ P T V S+ +A+
Sbjct: 402 PAFFTIEELYNVPHVGQVVGGMLSEGQLHEGADVLVGPMKDGTFEKITVGSIRRSRQAVG 461
Query: 693 EAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIVLNH 547
PG+ ++ LRRG V + + PP +FTA +++L H
Sbjct: 462 CVNPGEAASISLNLPDGVSLRRGMVLAEIDHQPPV-CYEFTANLLLLCH 509
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 39.5 bits (88), Expect = 0.003
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Frame = -1
Query: 852 LPLQDVYQIGGIGTVPVGRVETGVLKPGTIVVFA--PANITTEVKSVEMHHEALQEAVPG 679
+P+ I G GTV VG +E GVLK G V + T +++ ++++E G
Sbjct: 242 MPIASKTAITGRGTVIVGTLERGVLKKGDKVEIKGDGQTLQTTASDIQVFGKSVKEVRAG 301
Query: 678 DNVGFNVKNVSVKELRRGYVAG 613
D+ G + V ++RG AG
Sbjct: 302 DHCGVLCRGVKGDTVKRGMWAG 323
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 39.5 bits (88), Expect = 0.003
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Frame = -1
Query: 852 LPLQDVYQIGGIGTVPVGRVETGVLKPGTIVVFA--PANITTEVKSVEMHHEALQEAVPG 679
+P+ I G GTV VG +E GVLK G V + T +++ ++++E G
Sbjct: 242 MPIASKTAITGRGTVIVGTLERGVLKKGDKVEIKGDGQTLQTTASDIQVFGKSVKEVRAG 301
Query: 678 DNVGFNVKNVSVKELRRGYVAG 613
D+ G + V ++RG AG
Sbjct: 302 DHCGVLCRGVKGDTVKRGMWAG 323
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 31.9 bits (69), Expect = 0.61
Identities = 19/65 (29%), Positives = 29/65 (44%)
Frame = -1
Query: 852 LPLQDVYQIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDN 673
+ + + I G GTV G V GVL+ T + F N VK++E + + + G
Sbjct: 204 IAIDHCFAIKGQGTVLTGTVIRGVLRLNTEIEFPALNEKRRVKTLETWKQRVGQVAAGAR 263
Query: 672 VGFNV 658
F V
Sbjct: 264 AAFLV 268
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 31.9 bits (69), Expect = 0.61
Identities = 19/65 (29%), Positives = 29/65 (44%)
Frame = -1
Query: 852 LPLQDVYQIGGIGTVPVGRVETGVLKPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDN 673
+ + + I G GTV G V GVL+ T + F N VK++E + + + G
Sbjct: 163 IAIDHCFAIKGQGTVLTGTVIRGVLRLNTEIEFPALNEKRRVKTLETWKQRVGQVAAGAR 222
Query: 672 VGFNV 658
F V
Sbjct: 223 AAFLV 227
>Z81076-4|CAB03053.1| 172|Caenorhabditis elegans Hypothetical
protein F35C5.4 protein.
Length = 172
Score = 30.7 bits (66), Expect = 1.4
Identities = 27/97 (27%), Positives = 39/97 (40%), Gaps = 3/97 (3%)
Frame = +2
Query: 554 STMT*AVKSAAPLGGLFLESPAT*PRRNSLTDTFFTLKPTLSPG-TASWRASWCISTDLT 730
ST T A+ + P ++ P + FT +S + S R S +S D T
Sbjct: 4 STATVAIIQSEPSTSSSSSPSSSRPEDGATVGNTFTQSSAVSESQSTSERTSRSVSPDST 63
Query: 731 SVVMLAGAKTTMVPGFN--TPVSTLPTGTVPIPPIWY 835
V + + VP + VST PT +PPI Y
Sbjct: 64 PVRVTTSTLLSTVPTSQDISGVSTAPTTKATLPPITY 100
>U97191-1|AAB52432.1| 805|Caenorhabditis elegans Nuclear pore
complex protein protein11 protein.
Length = 805
Score = 29.9 bits (64), Expect = 2.5
Identities = 28/96 (29%), Positives = 38/96 (39%), Gaps = 3/96 (3%)
Frame = +2
Query: 545 GWLSTMT*AVKSAAPLGGLFLESPAT*PRRNSLTDTFFTLKPTLSPGTASWRASW---CI 715
G ST T A S AP GGLF + T P + T F T +P T
Sbjct: 446 GASSTTTPA--STAPTGGLFGAATTTAPAAAAPTGGLFGAATTTAPATVGPTGGLFGAAT 503
Query: 716 STDLTSVVMLAGAKTTMVPGFNTPVSTLPTGTVPIP 823
+T + L +T+ + P +T T T+P P
Sbjct: 504 TTTPATAATLGQTPSTVSATPSLPTTTSTTSTLPKP 539
Score = 28.7 bits (61), Expect = 5.7
Identities = 23/81 (28%), Positives = 32/81 (39%)
Frame = +2
Query: 563 T*AVKSAAPLGGLFLESPAT*PRRNSLTDTFFTLKPTLSPGTASWRASWCISTDLTSVVM 742
T A +AAP GGLF + T P T F T +P TA+ + T +
Sbjct: 468 TTAPAAAAPTGGLFGAATTTAPATVGPTGGLFGAATTTTPATAATLGQTPSTVSATPSLP 527
Query: 743 LAGAKTTMVPGFNTPVSTLPT 805
+ T+ +P P PT
Sbjct: 528 TTTSTTSTLP---KPAEATPT 545
>AF039711-8|ABS19466.1| 766|Caenorhabditis elegans Hypothetical
protein F49D11.10 protein.
Length = 766
Score = 29.9 bits (64), Expect = 2.5
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = -1
Query: 777 KPGTIVVFAPANITTEVKSVEMHHEALQEAVPGDNVGFNVKN 652
KPGTI F P ITTE K H L+ + GD +++
Sbjct: 360 KPGTIQWFDPVTITTESKM----HVTLENTIDGDMTSRGIRS 397
>Z78064-8|CAO82042.1| 357|Caenorhabditis elegans Hypothetical
protein F57B1.9a protein.
Length = 357
Score = 29.1 bits (62), Expect = 4.3
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +2
Query: 155 MKYRSCMKNCAVNSSSYFLPLVAFSAALVTLPPPASLKLTALMTPTATVCLM 310
M Y +C ++N Y L ++A+V LPPP ++ + ++ A C++
Sbjct: 188 MMYNNCRYRYSLNVLHY--ELYCQTSAVVNLPPPKAISIMEIVIQFAIPCII 237
>Z19158-2|CAA79571.3| 262|Caenorhabditis elegans Hypothetical
protein T23G5.3 protein.
Length = 262
Score = 29.1 bits (62), Expect = 4.3
Identities = 20/51 (39%), Positives = 25/51 (49%)
Frame = +2
Query: 209 LPLVAFSAALVTLPPPASLKLTALMTPTATVCLMSRTAKRPRGGNSWKDST 361
+P+V + L PPP L +LM P TV + R K P G NS K T
Sbjct: 129 VPIVPRNLLLSKPPPPPPPPLPSLMQPKDTVQIPMR--KPPTGRNSKKIKT 177
>AL033514-38|CAA22111.2| 341|Caenorhabditis elegans Hypothetical
protein Y75B8A.33 protein.
Length = 341
Score = 29.1 bits (62), Expect = 4.3
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = -3
Query: 130 KRATNSFLFYIFYKACNVTLFYNLYKVIHNISETFC 23
KR NS++F I+ C + F Y++ + +C
Sbjct: 262 KRDVNSYVFVIWGVVCQILFFLTTYRIAELVVRIYC 297
>U41007-15|AAQ01538.1| 564|Caenorhabditis elegans Kinesin-like
protein protein 10,isoform b protein.
Length = 564
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -1
Query: 513 LDCHTAHIACKFAEIKEKVDRRTGKSTE 430
L C + C+ + +K+K + T KSTE
Sbjct: 457 LQCQNEKLCCELSSLKDKHEEATSKSTE 484
>U41007-14|AAA82277.1| 690|Caenorhabditis elegans Kinesin-like
protein protein 10,isoform a protein.
Length = 690
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -1
Query: 513 LDCHTAHIACKFAEIKEKVDRRTGKSTE 430
L C + C+ + +K+K + T KSTE
Sbjct: 457 LQCQNEKLCCELSSLKDKHEEATSKSTE 484
>AB023577-1|BAB82459.1| 690|Caenorhabditis elegans Kinesin like
protein protein.
Length = 690
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -1
Query: 513 LDCHTAHIACKFAEIKEKVDRRTGKSTE 430
L C + C+ + +K+K + T KSTE
Sbjct: 457 LQCQNEKLCCELSSLKDKHEEATSKSTE 484
>AL132864-2|CAB60592.1| 201|Caenorhabditis elegans Hypothetical
protein Y53H1A.3 protein.
Length = 201
Score = 27.9 bits (59), Expect = 9.9
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 5/40 (12%)
Frame = +1
Query: 733 SSDVGGGKDNNGTWF--QHTS---FNSADGHGTNTTDLVY 837
S +V GK ++G W Q TS F DGH T T +V+
Sbjct: 97 SLNVAAGKTHSGVWLGAQRTSATAFRWTDGHTTGTEAMVF 136
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,282,623
Number of Sequences: 27780
Number of extensions: 449782
Number of successful extensions: 1381
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1303
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1373
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2171433726
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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