Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_pT_I16
         (828 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z35604-6|CAA84681.1|  305|Caenorhabditis elegans Hypothetical pr...    28   9.4  
AF016663-5|AAC70880.1|  864|Caenorhabditis elegans Hypothetical ...    28   9.4  

>Z35604-6|CAA84681.1|  305|Caenorhabditis elegans Hypothetical
           protein ZK1058.6 protein.
          Length = 305

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = +1

Query: 550 GEESRLTASLAERGEILAVVDLRRRHVVTLY 642
           GEES+L  SLA +  I  V+ +  R   TLY
Sbjct: 81  GEESKLIESLAAQNNIHIVIGVVEREASTLY 111


>AF016663-5|AAC70880.1|  864|Caenorhabditis elegans Hypothetical
           protein F21E9.5 protein.
          Length = 864

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 10/19 (52%), Positives = 15/19 (78%)
 Frame = +1

Query: 343 DESSPFTPFHRNMSIPRQR 399
           D S+ FTPFH+N+++P  R
Sbjct: 502 DCSTTFTPFHKNVTVPVTR 520


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,457,324
Number of Sequences: 27780
Number of extensions: 280550
Number of successful extensions: 580
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 528
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 580
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2050970610
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)