Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_pT_I14
(823 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_03_0351 + 18030656-18030823,18030963-18031113,18031214-180313... 53 2e-07
10_08_0654 - 19616426-19616656,19617046-19617249,19617654-196178... 44 1e-04
09_06_0015 - 20234231-20234344,20234846-20234902,20234968-202351... 36 0.029
12_01_0079 + 644754-645932,645966-646061,646193-647122 36 0.039
11_01_0078 + 609005-610183,610217-610312,610444-611373 36 0.039
11_03_0140 - 10637818-10638059,10638189-10638461,10639963-106404... 36 0.051
09_04_0545 - 18457169-18457399,18457733-18457915,18458012-184582... 34 0.12
08_02_1473 - 27358162-27358275,27358968-27359024,27359102-273592... 33 0.36
04_04_1144 + 31222556-31222633,31223238-31227665,31227724-312277... 32 0.48
12_02_0248 + 16413295-16414394,16416511-16416762,16416839-164170... 31 0.84
10_08_0374 - 17312430-17312513,17312794-17313029,17313081-173132... 31 0.84
03_05_0371 + 23570246-23570359,23570499-23570575,23570600-235706... 31 0.84
05_05_0336 + 24167891-24167982,24168501-24168600,24169216-241693... 31 1.1
02_05_0092 + 25749070-25750638 31 1.1
01_05_0471 + 22535477-22535609,22535714-22535808,22535929-225360... 31 1.5
01_05_0199 - 19174971-19175105,19176302-19176628,19176813-191769... 31 1.5
09_06_0243 - 21813223-21813456,21814266-21814367,21814501-218147... 30 1.9
07_03_1144 + 24331104-24331292,24331387-24331611,24332133-243325... 30 1.9
12_02_0693 - 22207582-22207620,22208421-22208597,22209258-222093... 30 2.6
07_01_1104 - 10160493-10160599,10160632-10160637,10160930-101609... 30 2.6
05_07_0247 + 28643862-28644310,28645151-28645207,28645644-286489... 29 3.4
03_05_0176 + 21546952-21547887,21548856-21548921,21549959-215508... 29 3.4
01_01_0409 - 3084821-3084988,3085069-3085155,3085270-3085476,308... 29 3.4
09_02_0362 + 7860088-7860197,7861606-7861636,7861738-7861801,786... 29 4.5
02_02_0539 - 11315788-11315841,11316620-11316700,11316728-11317711 29 4.5
05_03_0340 + 12691974-12692155,12692248-12692312,12692816-126928... 29 5.9
03_05_0235 - 22214700-22214914,22218782-22219045,22219258-22219294 29 5.9
02_04_0160 - 20427774-20428217,20428301-20428402,20428503-204285... 29 5.9
03_02_0025 + 5084003-5084303,5084449-5084639,5084793-5084873,508... 28 7.8
02_05_0650 - 30615151-30615393 28 7.8
01_06_1656 + 38946922-38947542,38947640-38947739,38948045-389481... 28 7.8
>02_03_0351 +
18030656-18030823,18030963-18031113,18031214-18031309,
18032027-18032103,18032627-18032706,18033216-18033276,
18034153-18034220,18034312-18034393,18034552-18034638,
18035009-18035086,18035336-18035455,18035554-18035730
Length = 414
Score = 53.2 bits (122), Expect = 2e-07
Identities = 22/52 (42%), Positives = 40/52 (76%)
Frame = -3
Query: 587 IKSGKELQDAKQRLQEQEMQKLVEQRRMEKIEDQKARERVRAQIEADKQARK 432
I+ GKEL +AK+ ++ E ++++E RR+EK E+++ARE++R ++E DK R+
Sbjct: 214 IRIGKELLEAKRIEEDNERKRMIELRRLEKEEEKRAREKIRQKLEEDKAERR 265
Score = 31.5 bits (68), Expect = 0.84
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -2
Query: 819 SXKCDECGKLFKNQDEIEYHAAKTNH 742
S +C +CG L ++ +E + HA TNH
Sbjct: 5 SLRCGDCGVLLRSVEEAQAHAEATNH 30
>10_08_0654 -
19616426-19616656,19617046-19617249,19617654-19617824,
19619617-19620411
Length = 466
Score = 44.4 bits (100), Expect = 1e-04
Identities = 34/162 (20%), Positives = 68/162 (41%), Gaps = 1/162 (0%)
Frame = -3
Query: 575 KELQDAKQRLQEQEMQKLVEQRRMEKIE-DQKARERVRAQIEADKQARKLAALGKXXXXX 399
+E QDA R + Q QRR E+ + +++A E R + E ++ + A
Sbjct: 307 REEQDAAYRAALEADQARERQRREEQEKREREAAEAERKRKEEEEAQERAAQEAAEKEAA 366
Query: 398 XXXXXXXXXXXXXPNPKVSYEQARIQLRLPDGRALSQTFGAKEQLSAVRLYLQMHAHEYA 219
P+ + R+ +R P G + F + +++ LY + + +
Sbjct: 367 LARRRQEKAMALGAEPEKGPDVTRVLIRFPTGERKERRFNSSTTITS--LYDYVDSLDCL 424
Query: 218 QSDNYKLMTTFPKKVFTSEDYDKPLDFLGLVPSAVIIVSKSQ 93
+++ Y L++ FP+ + E + L+ GL P A + + Q
Sbjct: 425 KAEKYSLVSNFPRVTYGPEKLSQTLEEAGLHPQASLFIEIEQ 466
>09_06_0015 -
20234231-20234344,20234846-20234902,20234968-20235111,
20235581-20235745,20235817-20236005,20236086-20236326,
20236412-20236512,20236704-20237241,20238101-20238132,
20238677-20238760
Length = 554
Score = 36.3 bits (80), Expect = 0.029
Identities = 32/140 (22%), Positives = 61/140 (43%), Gaps = 1/140 (0%)
Frame = -3
Query: 545 QEQEMQKLVEQRRMEKIEDQKARERVRAQIEADKQARKLAALGKXXXXXXXXXXXXXXXX 366
QE+E+ K +++ + ++E+ ARE A +E KQ + +
Sbjct: 407 QEKEL-KALQEAELRRLEETAARE---AALEKQKQEEEERRKKQLEEEELESSLASKQAS 462
Query: 365 XXPNPKVSYEQA-RIQLRLPDGRALSQTFGAKEQLSAVRLYLQMHAHEYAQSDNYKLMTT 189
P E A + +R+PDG + F +L + +L + Y + Y+L+ +
Sbjct: 463 LPSEPAADEEGAVTLVVRMPDGSRQGRRFLKSHKLQFLFDFLDI-GRTY-KPGTYRLVRS 520
Query: 188 FPKKVFTSEDYDKPLDFLGL 129
+P++ FT+ + D LGL
Sbjct: 521 YPRRAFTTGEGDMSFSDLGL 540
>12_01_0079 + 644754-645932,645966-646061,646193-647122
Length = 734
Score = 35.9 bits (79), Expect = 0.039
Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = -3
Query: 575 KELQDAKQRLQEQEMQKLVEQRRMEKIEDQKARERVR-AQIEADKQARK 432
KE+ + ++R Q +EM KLVE+RR + E +A ER + A +K RK
Sbjct: 228 KEMLEEEERKQREEMAKLVEERRRLRDEKAEAEERSKGATPVGEKDPRK 276
>11_01_0078 + 609005-610183,610217-610312,610444-611373
Length = 734
Score = 35.9 bits (79), Expect = 0.039
Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = -3
Query: 575 KELQDAKQRLQEQEMQKLVEQRRMEKIEDQKARERVR-AQIEADKQARK 432
KE+ + ++R Q +EM KLVE+RR + E +A ER + A +K RK
Sbjct: 228 KEMLEEEERKQREEMAKLVEERRRLRDEKAEAEERSKGATPVGEKDPRK 276
>11_03_0140 -
10637818-10638059,10638189-10638461,10639963-10640473,
10640556-10640768,10642717-10642784,10642893-10642958,
10644862-10644961
Length = 490
Score = 35.5 bits (78), Expect = 0.051
Identities = 20/67 (29%), Positives = 35/67 (52%)
Frame = -3
Query: 329 RIQLRLPDGRALSQTFGAKEQLSAVRLYLQMHAHEYAQSDNYKLMTTFPKKVFTSEDYDK 150
++ +R+PDG +L + L V+ ++ + A S Y L +P+KVFT +D +
Sbjct: 266 QLVVRIPDGPSLQIKLTKDDNLRKVKNFVDENRANGAGS--YDLAMLYPRKVFTEQDMEA 323
Query: 149 PLDFLGL 129
L LG+
Sbjct: 324 TLHELGI 330
>09_04_0545 -
18457169-18457399,18457733-18457915,18458012-18458227,
18459050-18459610
Length = 396
Score = 34.3 bits (75), Expect = 0.12
Identities = 17/79 (21%), Positives = 35/79 (44%)
Frame = -3
Query: 329 RIQLRLPDGRALSQTFGAKEQLSAVRLYLQMHAHEYAQSDNYKLMTTFPKKVFTSEDYDK 150
+I +R P+G Q F + + + Y+ NY+L+ ++P+K + + +
Sbjct: 320 KIMIRFPNGERRQQAFHHTDTIREIYRYVDSLG--IPGIGNYQLVRSYPRKTYGRQQLEM 377
Query: 149 PLDFLGLVPSAVIIVSKSQ 93
L G PS + + + Q
Sbjct: 378 SLQDAGFYPSVTLYIEQLQ 396
>08_02_1473 -
27358162-27358275,27358968-27359024,27359102-27359245,
27359770-27359934,27360020-27360208,27360301-27360535,
27360826-27360932,27361020-27361103,27361185-27361695,
27361793-27361854,27363373-27363456
Length = 583
Score = 32.7 bits (71), Expect = 0.36
Identities = 16/66 (24%), Positives = 33/66 (50%)
Frame = -3
Query: 326 IQLRLPDGRALSQTFGAKEQLSAVRLYLQMHAHEYAQSDNYKLMTTFPKKVFTSEDYDKP 147
+ +R+PDGR + F + L + ++ + + Y+L+ ++P++ FT +
Sbjct: 506 VVVRMPDGRRQGRRFMKSDNLQVLFDFIDIS--RTFKPGTYRLVRSYPRRAFTDSESQMS 563
Query: 146 LDFLGL 129
L LGL
Sbjct: 564 LSDLGL 569
>04_04_1144 +
31222556-31222633,31223238-31227665,31227724-31227789,
31227790-31228014,31228097-31228255,31228393-31228551,
31228855-31229013,31229371-31229490,31229604-31229825
Length = 1871
Score = 32.3 bits (70), Expect = 0.48
Identities = 17/50 (34%), Positives = 29/50 (58%)
Frame = -3
Query: 578 GKELQDAKQRLQEQEMQKLVEQRRMEKIEDQKARERVRAQIEADKQARKL 429
G EL+ +K+R+QE E + ++ K+E+ K + A EA K+A +L
Sbjct: 170 GSELESSKERIQEIEAELAASADKLHKLEELKDERSLHAAQEA-KRASEL 218
>12_02_0248 +
16413295-16414394,16416511-16416762,16416839-16417055,
16417216-16417353,16417493-16417669,16417744-16417851,
16417925-16418392,16418493-16418570,16418673-16418756
Length = 873
Score = 31.5 bits (68), Expect = 0.84
Identities = 17/47 (36%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Frame = -3
Query: 575 KELQDAKQRLQ-EQEMQKLVEQRRMEKIEDQKARERVRAQIEADKQA 438
+E + ++R + EQE ++ E+R EK +D+K RE R + E +K A
Sbjct: 761 REREKERERQEWEQEKERECEERAREKEQDRKERELERKERELEKIA 807
>10_08_0374 -
17312430-17312513,17312794-17313029,17313081-17313261,
17313335-17313445,17313495-17313722,17313862-17313999,
17314159-17314375,17314452-17314564,17314919-17314921
Length = 436
Score = 31.5 bits (68), Expect = 0.84
Identities = 15/43 (34%), Positives = 28/43 (65%)
Frame = -3
Query: 566 QDAKQRLQEQEMQKLVEQRRMEKIEDQKARERVRAQIEADKQA 438
++ +++ +EQE ++ E+R EK +D+K RE R + E +K A
Sbjct: 354 KERERQEREQEKERECEERAREKEQDRKERELERKERELEKIA 396
>03_05_0371 +
23570246-23570359,23570499-23570575,23570600-23570675,
23570761-23570892,23570945-23571412,23571513-23571590,
23571693-23571809
Length = 353
Score = 31.5 bits (68), Expect = 0.84
Identities = 15/43 (34%), Positives = 28/43 (65%)
Frame = -3
Query: 566 QDAKQRLQEQEMQKLVEQRRMEKIEDQKARERVRAQIEADKQA 438
++ +++ +EQE ++ E+R EK +D+K RE R + E +K A
Sbjct: 234 KERERQEREQEKERECEERAREKEQDRKERELERKERELEKIA 276
>05_05_0336 +
24167891-24167982,24168501-24168600,24169216-24169375,
24170119-24170566,24171020-24171095,24171204-24171250,
24171345-24171528
Length = 368
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Frame = -3
Query: 575 KELQDAKQRLQEQEMQKLVEQRRMEKIEDQKARERV---RAQIEADKQARKLAALGK 414
++LQ+ RL+E+E+ E+ +E ++ R+RV + Q+ K AR A K
Sbjct: 279 EDLQEVDDRLEEEEIDAAAEREEYLTLEQEEYRQRVDMLKKQLTESKAARTTKANSK 335
>02_05_0092 + 25749070-25750638
Length = 522
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/83 (21%), Positives = 37/83 (44%)
Frame = -3
Query: 353 PKVSYEQARIQLRLPDGRALSQTFGAKEQLSAVRLYLQMHAHEYAQSDNYKLMTTFPKKV 174
P + R+++R PDG +++ FG K +++ + Y + H+ Q+ K +
Sbjct: 437 PMEGEKMYRMRVRFPDGSVVTKEFGCKRRVAVLFNYCRSVLHDKPQAFKIKRLLGVGGAF 496
Query: 173 FTSEDYDKPLDFLGLVPSAVIIV 105
D + LGL + V ++
Sbjct: 497 HELPQGDHSFEDLGLNCATVSVI 519
>01_05_0471 +
22535477-22535609,22535714-22535808,22535929-22536050,
22536165-22536702,22536774-22538105
Length = 739
Score = 30.7 bits (66), Expect = 1.5
Identities = 18/44 (40%), Positives = 26/44 (59%)
Frame = -3
Query: 575 KELQDAKQRLQEQEMQKLVEQRRMEKIEDQKARERVRAQIEADK 444
+E +AKQR +E ++ KL E RR+E E + A E A E +K
Sbjct: 324 REAINAKQRTKELQLLKLEEARRLE--EARHAEEAALAMAEMEK 365
>01_05_0199 -
19174971-19175105,19176302-19176628,19176813-19176915,
19178852-19178916,19179941-19180048,19180213-19180305,
19180395-19180442,19180801-19180899,19180980-19181096,
19181186-19181239,19181312-19181404,19181776-19181881,
19182050-19182084,19182173-19182259,19182385-19182462,
19182528-19182596,19182682-19182780,19183644-19183685,
19184498-19184570,19184654-19184982,19185070-19185127,
19185217-19185269,19186075-19186144,19186276-19186337,
19186452-19186540,19186906-19187011,19187110-19187178,
19187295-19187330
Length = 900
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/55 (30%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Frame = -3
Query: 575 KELQDAKQRLQEQE-MQKLVEQRRMEKIEDQKARERVRAQIEADKQARKLAALGK 414
KE K+RL+E+E +K E+ E+ ++++ +E+ R + E DK+ + GK
Sbjct: 733 KERLKEKERLREEEKARKEKEREEKERRKEKEKKEKERKEKERDKEKEREKDKGK 787
>09_06_0243 -
21813223-21813456,21814266-21814367,21814501-21814701,
21815591-21815716,21815791-21816072,21816218-21816388,
21816838-21816999,21817404-21817467,21818136-21818503
Length = 569
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/51 (25%), Positives = 36/51 (70%), Gaps = 2/51 (3%)
Frame = -3
Query: 563 DAKQRLQEQEMQK--LVEQRRMEKIEDQKARERVRAQIEADKQARKLAALG 417
+A Q+L+E+ +++ + E++ ++KIE++ + + + ++D+ ++LAA+G
Sbjct: 492 EALQQLREKALRRASMTEEQVLQKIEERTSARKAKQYEKSDEIRKELAAVG 542
>07_03_1144 +
24331104-24331292,24331387-24331611,24332133-24332521,
24332762-24332856,24333300-24333673
Length = 423
Score = 30.3 bits (65), Expect = 1.9
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 8/64 (12%)
Frame = +1
Query: 169 VNTFFGNVVINL*LS-DCAYSCACICKYSR-TADNCS------LAPNVCERALPSGNRSC 324
++TF ++++ L C Y+ C+C+ S T CS LA V LPSG SC
Sbjct: 360 IHTFTTSLLLQLAARFACRYTARCLCRISSLTCRRCSTRRLRDLAAVVTSSPLPSGVVSC 419
Query: 325 ILAC 336
+ C
Sbjct: 420 TIDC 423
>12_02_0693 -
22207582-22207620,22208421-22208597,22209258-22209347,
22210215-22210280,22210473-22210570,22210669-22210789,
22210875-22212477,22213332-22213915
Length = 925
Score = 29.9 bits (64), Expect = 2.6
Identities = 19/53 (35%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Frame = -3
Query: 575 KELQDAKQRLQEQEMQKLVEQRRMEKIEDQKARERVRAQI--EADKQARKLAA 423
+E + ++ +E+E ++L E+R +EK Q+ RER Q A K+AR+ AA
Sbjct: 530 REREMRQREEKEREQRRLEEERELEK---QRERERAARQAVERATKEARERAA 579
>07_01_1104 -
10160493-10160599,10160632-10160637,10160930-10160975,
10161053-10161190,10161275-10161679,10163193-10163330,
10163401-10163482,10163596-10163943,10164294-10164655,
10165154-10165209,10166428-10166558,10166564-10166628,
10169191-10169631
Length = 774
Score = 29.9 bits (64), Expect = 2.6
Identities = 16/51 (31%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Frame = -3
Query: 575 KELQDAKQRLQEQEMQKLVEQRRMEKIE-DQKARERVRAQIEADKQARKLA 426
K ++AK+ +E+ QK ++ E++E +QK RER +A+++ +K A
Sbjct: 241 KAEKEAKRAEREKAEQKKRSKKHQEEVEREQKRRERQQAELKRQASIQKQA 291
>05_07_0247 + 28643862-28644310,28645151-28645207,28645644-28648950,
28649069-28649144,28649356-28649426,28649524-28649589,
28649677-28649766,28649874-28650050,28650513-28650548
Length = 1442
Score = 29.5 bits (63), Expect = 3.4
Identities = 13/53 (24%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Frame = -3
Query: 584 KSGKELQDAKQRLQEQEMQK-LVEQRRMEKIEDQ-KARERVRAQIEADKQARK 432
++ + L++ K+R ++ E ++ + E+R +K+E+Q + RER + ++ ++ R+
Sbjct: 1117 EASRRLEETKERDKKFEKEREIAEERERKKLEEQEREREREKDRLAVERATRE 1169
>03_05_0176 +
21546952-21547887,21548856-21548921,21549959-21550877,
21551277-21551449,21551927-21552475
Length = 880
Score = 29.5 bits (63), Expect = 3.4
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = -3
Query: 560 AKQRLQEQEMQKLVEQRRMEKIEDQKARERVRAQIEADKQARK 432
+K++ QE+ MQKL E R+ + Q+ + + AQ+ Q K
Sbjct: 787 SKEQEQERRMQKLRELRKKKNKRTQRRKRKQNAQVMKQHQFEK 829
>01_01_0409 -
3084821-3084988,3085069-3085155,3085270-3085476,
3085904-3085985,3086085-3086275,3086410-3086616,
3086709-3086871,3087905-3087960,3088035-3088148,
3088599-3089807
Length = 827
Score = 29.5 bits (63), Expect = 3.4
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = +1
Query: 241 CKYSRTADNCSLAPNVCERALPSGNRSCILAC 336
C+ +C+ P VC++ L GN C+ C
Sbjct: 427 CRRRCCEGDCAPCPEVCDKRLRCGNHKCLSPC 458
>09_02_0362 +
7860088-7860197,7861606-7861636,7861738-7861801,
7861922-7862052,7863575-7863784,7863891-7863956,
7864868-7865075,7866270-7866325,7866406-7867128,
7868246-7868299,7868667-7868695,7869501-7869585,
7870032-7870202,7870246-7870827
Length = 839
Score = 29.1 bits (62), Expect = 4.5
Identities = 10/49 (20%), Positives = 32/49 (65%)
Frame = -3
Query: 575 KELQDAKQRLQEQEMQKLVEQRRMEKIEDQKARERVRAQIEADKQARKL 429
++ Q LQ+Q+MQ++ +Q++ ++I+ + +++++ + +Q ++L
Sbjct: 713 QQQQSQGHPLQQQQMQQMQQQQQQQQIQQMQQQQQMQQMQQQQQQPQQL 761
>02_02_0539 - 11315788-11315841,11316620-11316700,11316728-11317711
Length = 372
Score = 29.1 bits (62), Expect = 4.5
Identities = 11/27 (40%), Positives = 21/27 (77%)
Frame = -3
Query: 551 RLQEQEMQKLVEQRRMEKIEDQKARER 471
RL+E+E Q+L ++ +++ED+KA+ R
Sbjct: 172 RLKEEERQRLEDELHRKRLEDRKAQTR 198
>05_03_0340 +
12691974-12692155,12692248-12692312,12692816-12692861,
12692959-12693057,12693722-12693755,12694489-12694618,
12694795-12694855,12695495-12695591,12696843-12697022,
12697120-12697233,12697283-12697396
Length = 373
Score = 28.7 bits (61), Expect = 5.9
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = -1
Query: 337 SKQEYNCDYLTEGLFHRHLELKNSCLQYDCIYK 239
++QE +C ++ +GL H+H SC+ + + K
Sbjct: 222 AQQEVSCCFINDGLIHKHGYTGRSCVPLEGLVK 254
>03_05_0235 - 22214700-22214914,22218782-22219045,22219258-22219294
Length = 171
Score = 28.7 bits (61), Expect = 5.9
Identities = 14/40 (35%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Frame = -3
Query: 557 KQRLQEQEMQKL-VEQRRMEKIEDQKARERVRAQIEADKQ 441
+++ QE+EMQ+L EQR + ++ RE++ A+ E +K+
Sbjct: 110 ERQQQEEEMQRLQAEQRAAMQAAEKLHREKLAAEKEGEKE 149
>02_04_0160 -
20427774-20428217,20428301-20428402,20428503-20428595,
20428675-20428860,20428966-20429213,20429292-20429412,
20430674-20430718,20431086-20431138,20431152-20431173
Length = 437
Score = 28.7 bits (61), Expect = 5.9
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = -3
Query: 572 ELQDAKQRLQEQEMQKLVEQRRMEKIEDQKARERVRA 462
ELQ ++ L Q+ + ME++ DQK ER++A
Sbjct: 382 ELQSQREELNSQKRTVEEQSGHMERLLDQKLEERMKA 418
>03_02_0025 +
5084003-5084303,5084449-5084639,5084793-5084873,
5084972-5085319,5085409-5086293
Length = 601
Score = 28.3 bits (60), Expect = 7.8
Identities = 15/52 (28%), Positives = 31/52 (59%), Gaps = 4/52 (7%)
Frame = -3
Query: 575 KELQDAKQRLQEQEMQKLVEQRRMEKIEDQKAR----ERVRAQIEADKQARK 432
+E ++ +QR +E+E ++ E+ R + E++K R E R Q E +++ R+
Sbjct: 483 REEEERRQREKEEEERRRQEEERKRREEEEKERREREEEERRQREKEEKKRR 534
>02_05_0650 - 30615151-30615393
Length = 80
Score = 28.3 bits (60), Expect = 7.8
Identities = 15/53 (28%), Positives = 29/53 (54%)
Frame = -3
Query: 575 KELQDAKQRLQEQEMQKLVEQRRMEKIEDQKARERVRAQIEADKQARKLAALG 417
K+ + K ++ E ++ E RRM + D +AR+R R+ + + AR ++G
Sbjct: 27 KQEEGEKVKVDETYQHQVSEMRRMVVLRDMEARQRSRSPL--GRAARPAISIG 77
>01_06_1656 +
38946922-38947542,38947640-38947739,38948045-38948189,
38948868-38948991,38949443-38949960,38950111-38950458,
38950557-38950638,38951309-38951707,38951790-38951927,
38952063-38952108,38952200-38952369
Length = 896
Score = 28.3 bits (60), Expect = 7.8
Identities = 17/53 (32%), Positives = 36/53 (67%), Gaps = 2/53 (3%)
Frame = -3
Query: 584 KSGKELQ-DAKQRLQEQ-EMQKLVEQRRMEKIEDQKARERVRAQIEADKQARK 432
K+ K+++ + KQ+ +E+ M+K ++++ E + +QK RE+ A+++ KQ RK
Sbjct: 336 KAQKQVEKELKQKEKEEARMRKQQKKQQEEALREQKRREKEEAEMK--KQQRK 386
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,984,003
Number of Sequences: 37544
Number of extensions: 279666
Number of successful extensions: 923
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 880
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 918
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2256438528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -