Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_pT_I14
         (823 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       27   0.28 
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             25   0.85 
DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex det...    24   1.5  
DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex det...    24   1.5  
DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex det...    24   1.5  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   7.9  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   7.9  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              22   7.9  

>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 26.6 bits (56), Expect = 0.28
 Identities = 13/45 (28%), Positives = 24/45 (53%)
 Frame = -3

Query: 575 KELQDAKQRLQEQEMQKLVEQRRMEKIEDQKARERVRAQIEADKQ 441
           K+L+ A Q+LQEQ    +++Q  + +  D+K       Q+   +Q
Sbjct: 140 KKLEQAIQQLQEQLQLNVIQQTHLLQTADKKKASAPLQQLALQQQ 184


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 25.0 bits (52), Expect = 0.85
 Identities = 9/29 (31%), Positives = 21/29 (72%)
 Frame = -3

Query: 557  KQRLQEQEMQKLVEQRRMEKIEDQKARER 471
            +Q+ Q+Q+ Q+  +Q++ ++ +  +ARER
Sbjct: 1211 QQQQQQQQQQQQQQQQQQQQQQQHQARER 1239



 Score = 23.0 bits (47), Expect = 3.4
 Identities = 13/50 (26%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
 Frame = -3

Query: 569 LQDAKQRLQEQEMQKLVEQRRMEKIEDQKAR-ERVRAQIEADKQARKLAA 423
           +QD  +  Q+Q+ Q   +QR+ ++ E+++ R + ++ ++  D+ A   AA
Sbjct: 156 VQDHHRPYQQQQQQ---QQRQQQRQEERRLRPDEIKVEVGEDEFANGGAA 202


>DQ325124-1|ABD14138.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -1

Query: 592 IESSLVKNYKMPSNDFKSKRCKNW 521
           I SSL  NY   +N++K   C N+
Sbjct: 81  IISSLSNNYNYNNNNYKKLYCNNY 104


>DQ325123-1|ABD14137.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -1

Query: 592 IESSLVKNYKMPSNDFKSKRCKNW 521
           I SSL  NY   +N++K   C N+
Sbjct: 81  IISSLSNNYNYNNNNYKKLYCNNY 104


>DQ325122-1|ABD14136.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 24.2 bits (50), Expect = 1.5
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -1

Query: 592 IESSLVKNYKMPSNDFKSKRCKNW 521
           I SSL  NY   +N++K   C N+
Sbjct: 81  IISSLSNNYNYNNNNYKKLYCNNY 104


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -1

Query: 307 TEGLFHRHLELKNSCLQYDCIYKCT 233
           ++GL HR ++LKN  L  +   K T
Sbjct: 715 SQGLVHRDVKLKNVLLDIENRAKLT 739


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -1

Query: 307 TEGLFHRHLELKNSCLQYDCIYKCT 233
           ++GL HR ++LKN  L  +   K T
Sbjct: 753 SQGLVHRDVKLKNVLLDIENRAKLT 777


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.8 bits (44), Expect = 7.9
 Identities = 12/34 (35%), Positives = 14/34 (41%), Gaps = 6/34 (17%)
 Frame = +1

Query: 235 CICKYSRTADNCSLAPN------VCERALPSGNR 318
           C  KY      C L+PN      VC R  P  +R
Sbjct: 82  CASKYCGIGKECELSPNSTIAVCVCMRKCPRRHR 115


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,241
Number of Sequences: 438
Number of extensions: 3562
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26217432
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)