Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_pT_I13
         (842 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U64608-2|AAB04591.1|  537|Caenorhabditis elegans Hypothetical pr...    31   0.78 
AF101316-5|AAC69233.2|   99|Caenorhabditis elegans Hypothetical ...    31   1.4  
Z81104-1|CAB70255.1|  329|Caenorhabditis elegans Hypothetical pr...    29   4.1  
U64846-4|AAG24111.1|  327|Caenorhabditis elegans Serpentine rece...    29   4.1  
AF078157-17|AAG24072.1| 1062|Caenorhabditis elegans Hypothetical...    29   5.5  

>U64608-2|AAB04591.1|  537|Caenorhabditis elegans Hypothetical
           protein T22B7.4 protein.
          Length = 537

 Score = 31.5 bits (68), Expect = 0.78
 Identities = 11/39 (28%), Positives = 27/39 (69%)
 Frame = +1

Query: 409 YVVLELYVEFDNIHKYMCFEIDEREFQTLVYTQRRGLPL 525
           +++ E+     N H+Y C ++D++E + LV+T+++ +P+
Sbjct: 168 WILAEVKGSISN-HRYECIDVDDQEKKLLVFTRKQLIPM 205


>AF101316-5|AAC69233.2|   99|Caenorhabditis elegans Hypothetical
           protein F52F10.1 protein.
          Length = 99

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +2

Query: 155 YILPKEKFNCREHKRLSYNIKFIGDSVSK 241
           + L  +K  CR H+  S NIKF+  SV K
Sbjct: 33  FFLVFQKLTCRSHQDASRNIKFVKSSVGK 61


>Z81104-1|CAB70255.1|  329|Caenorhabditis elegans Hypothetical
           protein M199.1 protein.
          Length = 329

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 14/56 (25%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
 Frame = -2

Query: 652 SE*WRSWIVLYKSIYL-ALYYVFVESFSNSETTEVSLF*SNECIMATHAAACTQAF 488
           S+ W +WI +   + L  LYY  V+  +  ++++ S     +C +     +CT  F
Sbjct: 202 SQAWNNWIFITCMVVLFTLYYALVKKLARGQSSKASRAIFIQCCIICFFNSCTAIF 257


>U64846-4|AAG24111.1|  327|Caenorhabditis elegans Serpentine
           receptor, class t protein38 protein.
          Length = 327

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +3

Query: 291 PNTNHCFYNVSLMMNNFQISLVYFFIYISFY 383
           PN  H + N S  +NNF I  +   +YI FY
Sbjct: 189 PNRIHDYDNTSHAINNFSIVAITCVMYIPFY 219


>AF078157-17|AAG24072.1| 1062|Caenorhabditis elegans Hypothetical
           protein F25E5.1 protein.
          Length = 1062

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -2

Query: 454 TYECYQTQRIILVPHRNISILKSV 383
           TY+C+ T R  L PHR   + K++
Sbjct: 92  TYQCFATTRSFLTPHRKRQLAKTM 115


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,691,266
Number of Sequences: 27780
Number of extensions: 394816
Number of successful extensions: 915
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 878
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 915
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2087513582
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)