Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_pT_I13
         (842 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.              24   2.0  
S78458-1|AAB34402.1|   46|Apis mellifera apamin protein.               23   2.7  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          23   3.5  
M29491-1|AAA27726.1|   79|Apis mellifera protein ( Bee homeobox-...    23   4.7  
DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.              22   6.2  
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    22   8.1  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    22   8.1  

>DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.
          Length = 135

 Score = 23.8 bits (49), Expect = 2.0
 Identities = 13/43 (30%), Positives = 21/43 (48%)
 Frame = +1

Query: 469 IDEREFQTLVYTQRRGLPLYIHLIKIKIPQWFLNWKTIQQIRN 597
           +DE E   L+          IHL   K+ + F  +KT+++I N
Sbjct: 92  LDENEVNKLITECSAISDADIHLKSSKLIKCFAKYKTLKEIMN 134


>S78458-1|AAB34402.1|   46|Apis mellifera apamin protein.
          Length = 46

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = -3

Query: 285 CIFSMVIILTIISAFFETLSPINLIL*DRRLCSRQ 181
           CI+  + ++ I S F   + P N    +  LC+R+
Sbjct: 7   CIYLFLSVILITSYFVTPVMPCNCKAPETALCARR 41


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 12/31 (38%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +3

Query: 543 NKDTSVVSELENDST---NT*YNARYMLLYN 626
           ++ +SVV+ + N  T   NT Y+++YM  YN
Sbjct: 185 SRGSSVVTGMNNIETYIVNTNYSSKYMREYN 215


>M29491-1|AAA27726.1|   79|Apis mellifera protein ( Bee
           homeobox-containing gene,partial cds, clone H17. ).
          Length = 79

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = +1

Query: 478 REFQTLVYTQRRGLPLYIHLIKIKIPQWFLN 570
           RE Q L   +R      +HL + ++  WF N
Sbjct: 29  REKQYLTIAERAEFSSSLHLTETQVKIWFQN 59


>DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.
          Length = 135

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 13/43 (30%), Positives = 20/43 (46%)
 Frame = +1

Query: 469 IDEREFQTLVYTQRRGLPLYIHLIKIKIPQWFLNWKTIQQIRN 597
           +D+ E   L+          +H+   KI Q F+ +KTI  I N
Sbjct: 92  LDDNETDQLIVECSPISDANVHIKISKIFQCFMKYKTITDILN 134


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 13/26 (50%), Positives = 15/26 (57%), Gaps = 2/26 (7%)
 Frame = -2

Query: 625 LYKSIYLA--LYYVFVESFSNSETTE 554
           LY S  L+  LYYV  E FSN +  E
Sbjct: 268 LYYSPLLSHGLYYVDTEQFSNPQYEE 293


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 9/38 (23%), Positives = 20/38 (52%)
 Frame = -2

Query: 529 CIMATHAAACTQAFEILSHRFQNTYTYECYQTQRIILV 416
           CIM   A++      IL++  +N  T+E  +  +++ +
Sbjct: 300 CIMFMVASSVVSTILILNYHHRNADTHEMSEWVKVVFL 337


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 237,457
Number of Sequences: 438
Number of extensions: 5342
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27067071
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)