Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_pT_I09
         (477 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          22   2.9  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      22   2.9  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    22   3.9  
DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    21   5.1  
DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride...    21   5.1  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    21   5.1  
DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride...    21   5.1  
AF080430-1|AAC28863.2|  208|Apis mellifera ribosomal protein S8 ...    21   5.1  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   6.8  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   6.8  

>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +2

Query: 179 TVKYSNCVTFMDRN 220
           T+ YSN VTF  RN
Sbjct: 300 TIMYSNGVTFPQRN 313


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +2

Query: 179 TVKYSNCVTFMDRN 220
           T+ YSN VTF  RN
Sbjct: 300 TIMYSNGVTFPQRN 313


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = +2

Query: 431 EWTYFHRLHRPAEF 472
           EW Y HR    +EF
Sbjct: 729 EWLYLHRARSESEF 742


>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 21.4 bits (43), Expect = 5.1
 Identities = 10/23 (43%), Positives = 11/23 (47%)
 Frame = -3

Query: 466 GRPMKSMKIGPFQIVFITNCRLN 398
           G P      GP +IV  TNC  N
Sbjct: 411 GGPPTGATTGPNEIVTCTNCGPN 433


>DQ667191-1|ABG75743.1|  475|Apis mellifera pH-sensitive chloride
           channel variant 3 protein.
          Length = 475

 Score = 21.4 bits (43), Expect = 5.1
 Identities = 10/23 (43%), Positives = 11/23 (47%)
 Frame = -3

Query: 466 GRPMKSMKIGPFQIVFITNCRLN 398
           G P      GP +IV  TNC  N
Sbjct: 397 GGPPTGATTGPNEIVTCTNCGPN 419


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 21.4 bits (43), Expect = 5.1
 Identities = 10/23 (43%), Positives = 11/23 (47%)
 Frame = -3

Query: 466 GRPMKSMKIGPFQIVFITNCRLN 398
           G P      GP +IV  TNC  N
Sbjct: 431 GGPPTGATTGPNEIVTCTNCGPN 453


>DQ667189-1|ABG75741.1|  458|Apis mellifera pH-sensitive chloride
           channel protein.
          Length = 458

 Score = 21.4 bits (43), Expect = 5.1
 Identities = 10/23 (43%), Positives = 11/23 (47%)
 Frame = -3

Query: 466 GRPMKSMKIGPFQIVFITNCRLN 398
           G P      GP +IV  TNC  N
Sbjct: 380 GGPPTGATTGPNEIVTCTNCGPN 402


>AF080430-1|AAC28863.2|  208|Apis mellifera ribosomal protein S8
           protein.
          Length = 208

 Score = 21.4 bits (43), Expect = 5.1
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -3

Query: 472 EFGRPMKSMKIGPFQI 425
           E GRP  + K+GP +I
Sbjct: 28  ELGRPAANTKLGPQRI 43


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = -2

Query: 461 ADEVYENRSIPD 426
           A E Y NRSIPD
Sbjct: 638 AMEFYYNRSIPD 649


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = -2

Query: 461 ADEVYENRSIPD 426
           A E Y NRSIPD
Sbjct: 676 AMEFYYNRSIPD 687


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,713
Number of Sequences: 438
Number of extensions: 2081
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12928545
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)