Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_pT_I06
(835 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z11115-12|CAA77452.1| 342|Caenorhabditis elegans Hypothetical p... 233 9e-62
U41029-2|AAL65785.1| 192|Caenorhabditis elegans Hypothetical pr... 120 1e-27
AC006615-4|AAK68233.2| 602|Caenorhabditis elegans Hypothetical ... 31 1.3
U41625-3|AAA83326.1| 264|Caenorhabditis elegans Hypothetical pr... 30 2.3
U64852-7|AAB04970.1| 452|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z73972-4|CAA98260.1| 666|Caenorhabditis elegans Hypothetical pr... 29 5.4
Z50016-1|CAA90318.1| 1106|Caenorhabditis elegans Hypothetical pr... 29 5.4
Z70308-1|CAA94351.1| 213|Caenorhabditis elegans Hypothetical pr... 28 7.2
AC093703-5|AAL00865.1| 725|Caenorhabditis elegans Hypothetical ... 28 9.5
AC084158-7|AAK68560.1| 929|Caenorhabditis elegans Hypothetical ... 28 9.5
AC006712-11|AAK39327.2| 308|Caenorhabditis elegans Hypothetical... 28 9.5
>Z11115-12|CAA77452.1| 342|Caenorhabditis elegans Hypothetical
protein ZK637.5 protein.
Length = 342
Score = 233 bits (571), Expect = 9e-62
Identities = 111/203 (54%), Positives = 142/203 (69%), Gaps = 5/203 (2%)
Frame = -2
Query: 834 DEXMSYAEVMKLVKGMNFSAVVFDTAPTGHTLRLLSFPQVVERGLGKLMRLKSKVAPFIN 655
DE MS+ E++KL+ ++F VVFDTAPTGHTLRLL FP ++E+ K++ L+ P +N
Sbjct: 135 DEAMSFGEMIKLIDSLDFDVVVFDTAPTGHTLRLLQFPTLLEKVFTKILSLQGMFGPMMN 194
Query: 654 QIASLFGLADFNSDMFSNKMDEMLSVIRQVNAQFKDPNQTTFVCVCIAEFLSLYETERLV 475
Q +FG+ + + KM L ++++NAQFKDPN TTFVCVCIAEFLSLYETERL+
Sbjct: 195 QFGGMFGMGGGSMNEMIEKMTTTLESVKKMNAQFKDPNCTTFVCVCIAEFLSLYETERLI 254
Query: 474 QELTRCGIDTHNIIVNQLLL-----RSSAPCELCAARHKVQEKYLEQIADLYEDFHVTKL 310
QEL++ GIDTHNIIVNQLL + C CA+R +Q KYL I +LYEDFHV KL
Sbjct: 255 QELSKQGIDTHNIIVNQLLFPDTDANGTVSCRKCASRQAIQSKYLTDIDELYEDFHVVKL 314
Query: 309 PLLEKEVRGASAVNAFSELLLKP 241
PLLE EVRG A+ FSE ++ P
Sbjct: 315 PLLEAEVRGGPAILQFSERMVDP 337
>U41029-2|AAL65785.1| 192|Caenorhabditis elegans Hypothetical
protein F47G3.2 protein.
Length = 192
Score = 120 bits (289), Expect = 1e-27
Identities = 58/132 (43%), Positives = 85/132 (64%)
Frame = -2
Query: 810 VMKLVKGMNFSAVVFDTAPTGHTLRLLSFPQVVERGLGKLMRLKSKVAPFINQIASLFGL 631
+++L+ + F VVFDTA TGHTLRLL FP +V+ K++ L+ + P +N I +F +
Sbjct: 1 MIELIDSLGFDVVVFDTASTGHTLRLLQFPTIVDNFFTKILSLQGMLEPMLNNIGGMFEM 60
Query: 630 ADFNSDMFSNKMDEMLSVIRQVNAQFKDPNQTTFVCVCIAEFLSLYETERLVQELTRCGI 451
D + M + + ++NAQFKD N T FVC+C+A+F + ER +QEL++ G
Sbjct: 61 ED--DETLETMMTAAVKDLERMNAQFKDLNCTLFVCICMADF----QAERHIQELSKQGT 114
Query: 450 DTHNIIVNQLLL 415
DTHNIIVNQLL+
Sbjct: 115 DTHNIIVNQLLI 126
>AC006615-4|AAK68233.2| 602|Caenorhabditis elegans Hypothetical
protein C36B7.6 protein.
Length = 602
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/38 (36%), Positives = 17/38 (44%)
Frame = +2
Query: 263 NAFTAEAPRTSFSSKGSFVTWKSSYKSAICSRYFSWTL 376
N PR FS KGS+V + + RY SW L
Sbjct: 416 NPILGVIPRLKFSDKGSYVESDTKVYDQMAFRYLSWVL 453
>U41625-3|AAA83326.1| 264|Caenorhabditis elegans Hypothetical
protein K03A1.4a protein.
Length = 264
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = -2
Query: 657 NQIASLFGLADFNSDMFSNKMDEMLSVIRQVNAQFKDPNQ 538
+Q+ F + D + D F KM EMLS++R+++ Q P Q
Sbjct: 202 DQLREQFDMFDKDKDGFIEKM-EMLSIVRELSLQASFPRQ 240
>U64852-7|AAB04970.1| 452|Caenorhabditis elegans Hypothetical
protein W01A11.1 protein.
Length = 452
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = -1
Query: 262 FRTSLEALRSSYILHVKPILSITNVKDVIITN 167
F+T +E L+ + LHVKP S NVK +++ +
Sbjct: 119 FKTEIEGLQVHF-LHVKPPKSYKNVKPILVAH 149
>Z73972-4|CAA98260.1| 666|Caenorhabditis elegans Hypothetical
protein F15H10.7 protein.
Length = 666
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -2
Query: 414 RSSAPCELCAARHKVQEKYLEQIADLYE 331
RS A C +HK+Q KYLE+ + Y+
Sbjct: 332 RSVASCYDSTPQHKIQLKYLEEFLEKYD 359
>Z50016-1|CAA90318.1| 1106|Caenorhabditis elegans Hypothetical
protein T21C12.1a protein.
Length = 1106
Score = 28.7 bits (61), Expect = 5.4
Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = -2
Query: 321 VTKLPLLEK--EVRGASAVNAFSELLLKPYDPPTSST*NLYFPSPMLRTLLLRTCSI 157
+T LP LE R S + F+ +P+ T T NLY P RT + C++
Sbjct: 362 LTPLPHLESLPPKRTLSVPSYFNNTTYRPFYSSTDQTSNLYIPESQ-RTTIFSVCTV 417
>Z70308-1|CAA94351.1| 213|Caenorhabditis elegans Hypothetical
protein F49E11.4 protein.
Length = 213
Score = 28.3 bits (60), Expect = 7.2
Identities = 23/83 (27%), Positives = 33/83 (39%), Gaps = 4/83 (4%)
Frame = -1
Query: 751 WTYSQTSIIPASCRTRSRQA--DAFEVKGCPLHQSNCVTVWTSRFQLGHVQQQ--NG*DV 584
W +S + P T + Q + FE G S + RFQ+GH Q +
Sbjct: 93 WHFSSSLSTPEQYATLAPQKWWNEFETNGW---DSLIYNHASQRFQIGHAVQMAWHTTSK 149
Query: 583 ISYQTSECTVQRPESNYICVCLY 515
+ S+C V PE + VC Y
Sbjct: 150 VGCGYSKCAVGTPEQTMVVVCRY 172
>AC093703-5|AAL00865.1| 725|Caenorhabditis elegans Hypothetical
protein Y20F4.5 protein.
Length = 725
Score = 27.9 bits (59), Expect = 9.5
Identities = 20/91 (21%), Positives = 46/91 (50%)
Frame = -2
Query: 693 LMRLKSKVAPFINQIASLFGLADFNSDMFSNKMDEMLSVIRQVNAQFKDPNQTTFVCVCI 514
L+ +K+ ++ +++I SL + D S + M + + A + + T + V +
Sbjct: 569 LLNVKNAMSR-LSKIMSLSANRLLSDDDISELDESMKEFVEFLQAAHPEESITQKLHVLV 627
Query: 513 AEFLSLYETERLVQELTRCGIDTHNIIVNQL 421
A + + +TER + L+ GI++ + + N+L
Sbjct: 628 AHVVEVAKTERNLGRLSEQGIESLHAVFNRL 658
>AC084158-7|AAK68560.1| 929|Caenorhabditis elegans Hypothetical
protein Y69A2AR.16 protein.
Length = 929
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = -2
Query: 675 KVAPFINQIASLFGLADFNSDMFSNKMDEMLS 580
+V PFI + LF A D+F+N EM+S
Sbjct: 399 EVDPFIIVMGELFAWASIEHDVFANASREMIS 430
>AC006712-11|AAK39327.2| 308|Caenorhabditis elegans Hypothetical
protein Y119C1B.10 protein.
Length = 308
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/50 (26%), Positives = 20/50 (40%)
Frame = -1
Query: 679 VKGCPLHQSNCVTVWTSRFQLGHVQQQNG*DVISYQTSECTVQRPESNYI 530
V+GCPLH C +V F+ + N + + Q PE +
Sbjct: 81 VQGCPLHSIRCTSVGNENFRKDIIHVANNSYFHYFLVGKGVYQEPEEGSV 130
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,894,905
Number of Sequences: 27780
Number of extensions: 399674
Number of successful extensions: 992
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 952
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 989
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2072006206
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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