Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_pT_H24
(819 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0438 - 18200329-18200430,18201203-18201335,18201964-182020... 122 3e-28
03_01_0372 + 2895807-2895883,2896557-2896647,2896741-2896839,289... 31 0.83
10_08_1034 + 22461397-22461702,22462311-22462524,22464936-224649... 30 2.5
10_08_0985 - 22042801-22042963,22043019-22043138,22043261-220435... 30 2.5
09_04_0668 + 19325747-19325785,19325825-19325881,19326361-193264... 30 2.5
08_02_0095 - 12285976-12286037,12286111-12287229,12287494-122886... 29 3.4
05_01_0547 - 4774320-4776089,4776823-4777028,4777563-4777818 29 3.4
12_01_0227 - 1718726-1721183,1721804-1721957,1722090-1722165,172... 29 4.4
11_01_0229 - 1771701-1774164,1774694-1774847,1774980-1775055,177... 29 4.4
05_04_0273 + 19632430-19632762,19633109-19633177,19633318-196333... 29 4.4
02_02_0321 - 8934512-8935504,8935581-8935715,8935831-8936217 29 4.4
07_03_0270 + 16094334-16094539,16095067-16095177,16095431-16095896 29 5.9
06_01_0452 + 3198475-3198962,3199062-3199191,3199332-3199497,319... 29 5.9
04_04_0076 + 22558105-22558261,22558356-22558405,22559837-225600... 29 5.9
05_07_0043 - 27284814-27285190,27285287-27285488,27285576-272856... 28 7.8
03_02_0322 + 7448046-7448135,7448402-7448515,7449119-7449437,744... 28 7.8
01_06_1022 + 33887089-33888411 28 7.8
>07_03_0438 -
18200329-18200430,18201203-18201335,18201964-18202034,
18202377-18202466,18203200-18203288,18203886-18203961,
18204094-18204264
Length = 243
Score = 122 bits (295), Expect = 3e-28
Identities = 73/217 (33%), Positives = 109/217 (50%), Gaps = 2/217 (0%)
Frame = -1
Query: 768 LEQFVLLAKGAKGSA--CAELIKQVLEAPGVHVFGELLEMPNIKELESGPYATHLKTLNL 595
+EQF A SA A L+ + P + F ELL +P + +L YA+ L L L
Sbjct: 13 IEQFSAQAAALSSSAPQLAALVLEATSHPALFAFSELLSLPALSKLTGTQYASSLDVLRL 72
Query: 594 FAYGTYKDYIENKSDYLELTTVQCKKLQHLTIATLATQEKCIPYSVLLEELDIKNVRDLE 415
FAYGT KDY N + L Q +KL+ L++ TLA K +PY L++ELD+ NVR+LE
Sbjct: 73 FAYGTLKDYKSNSGNLPALLPDQVRKLKQLSVLTLAESTKVLPYDQLMQELDVSNVRELE 132
Query: 414 DLIIEAIYADIIHGKLDQECKRVEVDVALGRDARLEDAASIADVLADWCNACEAVLNSVD 235
D +I EC V A GRD + ++ D L+DW + +L+ +
Sbjct: 133 DFLIN-------------ECM-YSVQFATGRDLTPDQLNNMIDTLSDWLGTSDNLLHQIQ 178
Query: 234 QHIQRANHQKQKAIRHQQGIEQKILYIKKTLKTQAEN 124
+ I+ A+ + +HQ+ E K+ KK++K N
Sbjct: 179 EKIKWADTMSEVNKKHQKEFEDKVEEAKKSIKEATTN 215
>03_01_0372 +
2895807-2895883,2896557-2896647,2896741-2896839,
2897220-2897268,2897269-2897405,2898027-2898248,
2898335-2898488,2898574-2898723,2898890-2898978,
2899632-2899844,2900180-2900314,2900461-2900640,
2901004-2901111,2901215-2901340,2901421-2901550,
2901637-2901729,2902067-2902192,2902294-2902304
Length = 729
Score = 31.5 bits (68), Expect = 0.83
Identities = 18/79 (22%), Positives = 36/79 (45%)
Frame = -1
Query: 240 VDQHIQRANHQKQKAIRHQQGIEQKILYIKKTLKTQAENDESASGANAEPHSAPKKNSSK 61
V + ++ + Q+ +RH+QG+E +IL +K++L + A S
Sbjct: 571 VYEELKSTQEKMQQEMRHRQGLEDEILRLKQSLADNCSEESKALCGMVRSGSGLGSVPFM 630
Query: 60 SKTARNSAKLLAEEHIIEK 4
SK+ ++ L ++ I K
Sbjct: 631 SKSGKSRELLSSQRSNISK 649
>10_08_1034 +
22461397-22461702,22462311-22462524,22464936-22464997,
22465035-22465381,22465495-22465591
Length = 341
Score = 29.9 bits (64), Expect = 2.5
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +3
Query: 504 SDAVISCTGLWLILNSPICSQCSPYMC 584
+DAV C+GL+ I N+P SQ + C
Sbjct: 74 ADAVHGCSGLFAIFNTPSSSQSQSHSC 100
>10_08_0985 -
22042801-22042963,22043019-22043138,22043261-22043562,
22044055-22044351,22044448-22044556,22044826-22045358,
22045446-22045644,22045741-22045865,22045937-22046020,
22046093-22046221,22046337-22046465,22046593-22046739,
22047106-22047346,22047859-22047980
Length = 899
Score = 29.9 bits (64), Expect = 2.5
Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 3/69 (4%)
Frame = -1
Query: 627 PYATHLKTLNLFAYGTYKDYIENKSDYLELTT---VQCKKLQHLTIATLATQEKCIPYSV 457
P L+ NLF+ K Y +N +YL + + KK + +E+ IP V
Sbjct: 399 PGKEELRQKNLFSVSDCKMYWQNSGEYLAVQVDRYTKTKKSTYTGFELFRIKERDIPIEV 458
Query: 456 LLEELDIKN 430
L ELD KN
Sbjct: 459 L--ELDNKN 465
>09_04_0668 +
19325747-19325785,19325825-19325881,19326361-19326490,
19328303-19328352,19328645-19328741,19328834-19328902,
19328986-19329078,19329194-19329317,19329904-19329973,
19330046-19330087,19330245-19330373,19330468-19330575,
19330729-19330771,19330840-19330878,19331076-19331200,
19331397-19331409,19331504-19331574,19331849-19331936,
19332515-19332600,19332708-19332762,19332859-19333028,
19333157-19333273,19333392-19333453,19333734-19333793,
19333855-19333921
Length = 667
Score = 29.9 bits (64), Expect = 2.5
Identities = 16/65 (24%), Positives = 32/65 (49%)
Frame = -1
Query: 225 QRANHQKQKAIRHQQGIEQKILYIKKTLKTQAENDESASGANAEPHSAPKKNSSKSKTAR 46
+ + + +KA+ H + +K+L IKK L+ ++ A NAEP +K+ R
Sbjct: 456 EASQNMVRKAVIHSEVTNRKLLEIKKILEVDIA-EQMAIDTNAEPGEPERKDHLSGHEMR 514
Query: 45 NSAKL 31
+ + +
Sbjct: 515 DGSTM 519
>08_02_0095 - 12285976-12286037,12286111-12287229,12287494-12288604,
12288695-12288757,12288851-12288913,12289268-12289318,
12289538-12289617,12290078-12290164,12290349-12290435,
12290889-12290975,12292106-12292308,12292756-12292922
Length = 1059
Score = 29.5 bits (63), Expect = 3.4
Identities = 20/70 (28%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Frame = -1
Query: 237 DQHIQ---RANHQKQKAIRHQQGIEQKILYIKKTLKTQAENDESASGANAEPHSAPKKNS 67
++HI+ AN + +K R+++ +E+ I KK ++ Q + +E+ + A PK+N+
Sbjct: 974 EEHIEDPDTANTKGRKPKRYRRIVEKIIESSKKKIEEQEDAEENQNKAR------PKRNN 1027
Query: 66 SKSKTARNSA 37
++ K NSA
Sbjct: 1028 NEEKQTANSA 1037
>05_01_0547 - 4774320-4776089,4776823-4777028,4777563-4777818
Length = 743
Score = 29.5 bits (63), Expect = 3.4
Identities = 23/76 (30%), Positives = 34/76 (44%)
Frame = -1
Query: 321 DARLEDAASIADVLADWCNACEAVLNSVDQHIQRANHQKQKAIRHQQGIEQKILYIKKTL 142
+A LE A S + L + +A + LNS I N + Q Q G E+KI +KK
Sbjct: 304 EASLEYADSKIEQLEEGYSATKDDLNSKMCSIDSLNKEVQTLYTAQTGAEEKISELKKQY 363
Query: 141 KTQAENDESASGANAE 94
A E + ++E
Sbjct: 364 ADLAAASELRASCDSE 379
>12_01_0227 - 1718726-1721183,1721804-1721957,1722090-1722165,
1722327-1722485,1722552-1722662,1722791-1722841,
1722948-1723192,1723745-1725278
Length = 1595
Score = 29.1 bits (62), Expect = 4.4
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = +3
Query: 444 IPQVTHCKGYISLVLQVLQWSDA 512
+P+VTHC + L+++ +W DA
Sbjct: 940 LPEVTHCNRLLKLLVEQRRWDDA 962
>11_01_0229 -
1771701-1774164,1774694-1774847,1774980-1775055,
1775439-1775477,1778516-1778674,1778741-1778851,
1779014-1779064,1779173-1779256
Length = 1045
Score = 29.1 bits (62), Expect = 4.4
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = +3
Query: 444 IPQVTHCKGYISLVLQVLQWSDA 512
+P+VTHC + L+++ +W DA
Sbjct: 389 LPEVTHCNRLLKLLVEQRRWDDA 411
>05_04_0273 +
19632430-19632762,19633109-19633177,19633318-19633374,
19633534-19633597,19633887-19634102,19634761-19634803,
19635267-19635345,19635467-19635559
Length = 317
Score = 29.1 bits (62), Expect = 4.4
Identities = 28/109 (25%), Positives = 43/109 (39%), Gaps = 3/109 (2%)
Frame = -1
Query: 375 GKLDQECKRVEVDVALGRDARLEDAASIADVLADWCNACEAVLNSVDQH---IQRANHQK 205
G+L+ E R+ +A RDA ED + + L L ++ +QR N
Sbjct: 63 GRLEAEGARLRAQLA-ERDAAAEDLSERVEQLDAALAVATGRLRRAEEEKEALQRDNSLL 121
Query: 204 QKAIRHQQGIEQKILYIKKTLKTQAENDESASGANAEPHSAPKKNSSKS 58
+R K+ KKTL + DE AN P + + S+ S
Sbjct: 122 SNTVRRLNRDVAKLEVFKKTLMQSLQEDEDP--ANTTPKARVSETSNFS 168
>02_02_0321 - 8934512-8935504,8935581-8935715,8935831-8936217
Length = 504
Score = 29.1 bits (62), Expect = 4.4
Identities = 19/63 (30%), Positives = 33/63 (52%)
Frame = -1
Query: 207 KQKAIRHQQGIEQKILYIKKTLKTQAENDESASGANAEPHSAPKKNSSKSKTARNSAKLL 28
KQ+A++ + E+ IKKT + Q + + A A+P+ K SS ++ + + L
Sbjct: 373 KQEALQLLKKKEKTDNIIKKTKEEQRKKKVGGAAAAADPNRPKKPASSFLLFSKEARRQL 432
Query: 27 AEE 19
AEE
Sbjct: 433 AEE 435
>07_03_0270 + 16094334-16094539,16095067-16095177,16095431-16095896
Length = 260
Score = 28.7 bits (61), Expect = 5.9
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +3
Query: 507 DAVISCTGLWLILNSPICSQ 566
D +++CT WL + SP CSQ
Sbjct: 190 DMMMACTPSWLFIPSPACSQ 209
>06_01_0452 +
3198475-3198962,3199062-3199191,3199332-3199497,
3199765-3199883,3200056-3200136,3200236-3200322,
3200644-3200715,3200791-3200859,3201349-3201426,
3201540-3201680,3202333-3202386,3202465-3202581
Length = 533
Score = 28.7 bits (61), Expect = 5.9
Identities = 34/147 (23%), Positives = 67/147 (45%), Gaps = 4/147 (2%)
Frame = -1
Query: 447 ELDIKNVRDLEDLIIEAIYADIIHGKLDQECKRVEVDVALGR---DARLEDAASI-ADVL 280
E++ KN++D ++E + E ++ ++ +GR + LE ++ +V
Sbjct: 374 EINAKNLQDFCLSLLEGTLPPYFRSEPVPE-EKGPIEKVVGRTFDSSVLESPQNVFLEVH 432
Query: 279 ADWCNACEAVLNSVDQHIQRANHQKQKAIRHQQGIEQKILYIKKTLKTQAENDESASGAN 100
A WC CEA+ +V++ + N Q ++ + I+ + + K Q N +
Sbjct: 433 APWCVDCEAISKNVEKLAKHFNDLGQTNLKFAR-IDAS---VNEHPKLQINNYPTLLLYP 488
Query: 99 AEPHSAPKKNSSKSKTARNSAKLLAEE 19
A+ S P K S KS ++ AK + E+
Sbjct: 489 AQDKSNPIKLSKKS-NLKDMAKFVKEK 514
>04_04_0076 +
22558105-22558261,22558356-22558405,22559837-22560044,
22560112-22560237,22560469-22560567,22560729-22561405,
22561483-22561731,22561808-22561936,22562021-22562089,
22562183-22562256,22563086-22563098,22563361-22563468,
22563541-22563651,22563725-22563811,22564043-22564068,
22564840-22564906,22565123-22565212,22565295-22565387,
22565515-22565604,22565699-22565761,22566349-22566447
Length = 894
Score = 28.7 bits (61), Expect = 5.9
Identities = 21/86 (24%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Frame = -1
Query: 405 IEAIYADIIHGKLDQECKRVE-VDVALGRDARLEDAASIADVLADWCNACEAVLNSVDQH 229
IE + + II + QE V+ V+ + ++ S A++ A + E V + ++
Sbjct: 365 IEELKSRIIELQKTQEIVMVQHVEECQVAEDKIRRLESEAEISASNISQLEKVASDLEGR 424
Query: 228 IQRANHQKQKAIRHQQGIEQKILYIK 151
+Q+ + A H+Q + QKIL ++
Sbjct: 425 VQKLLEDSRSAENHKQELLQKILKLE 450
>05_07_0043 -
27284814-27285190,27285287-27285488,27285576-27285650,
27285743-27285816,27285909-27285996,27286081-27286203,
27288374-27288580,27288631-27288636
Length = 383
Score = 28.3 bits (60), Expect = 7.8
Identities = 16/64 (25%), Positives = 29/64 (45%)
Frame = -1
Query: 225 QRANHQKQKAIRHQQGIEQKILYIKKTLKTQAENDESASGANAEPHSAPKKNSSKSKTAR 46
+R + QK ++ Q+ EQ+ LY K +++ + + + PK SKT R
Sbjct: 186 ERKRQRDQKKLQDQRKAEQEALYGSKPSSSKSHSTKKVPRNSTPGVQPPKSEILHSKTIR 245
Query: 45 NSAK 34
+ K
Sbjct: 246 ATKK 249
>03_02_0322 +
7448046-7448135,7448402-7448515,7449119-7449437,
7449519-7450453
Length = 485
Score = 28.3 bits (60), Expect = 7.8
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = -2
Query: 134 KQRMMNQRQVPMPSLTQHPKRIRAKARLHVTLPNCWQKS 18
K++ +++ +P +++H KR K R H + N QKS
Sbjct: 80 KEKRSDRKALPHGEISKHSKRTHHKKRKHEDINNADQKS 118
>01_06_1022 + 33887089-33888411
Length = 440
Score = 28.3 bits (60), Expect = 7.8
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +1
Query: 298 SCIFKPRISAKGHVHFHTFTFLVQLAVNYV 387
+C F A+G F T TF QLA +YV
Sbjct: 152 ACYFSHSRVAEGLAFFRTMTFTTQLAADYV 181
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,119,442
Number of Sequences: 37544
Number of extensions: 427879
Number of successful extensions: 1353
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1297
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1353
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2244686244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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