Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_pT_H24
(819 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U70855-1|AAB09161.1| 390|Caenorhabditis elegans Hypothetical pr... 48 6e-06
Z93395-2|CAB07705.1| 905|Caenorhabditis elegans Hypothetical pr... 31 0.75
Z83112-5|CAB05541.1| 905|Caenorhabditis elegans Hypothetical pr... 31 0.75
Z70287-1|CAA94302.3| 294|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z49130-6|CAA88971.1| 387|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z93778-3|CAB07846.1| 446|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z50109-13|CAD44092.1| 1549|Caenorhabditis elegans Hypothetical p... 29 3.0
Z50109-12|CAD44091.1| 1583|Caenorhabditis elegans Hypothetical p... 29 3.0
Z50109-11|CAD91624.1| 1520|Caenorhabditis elegans Hypothetical p... 29 3.0
Z50109-10|CAD89729.3| 1654|Caenorhabditis elegans Hypothetical p... 29 3.0
Z47810-5|CAD44133.1| 1549|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z47810-4|CAD44132.1| 1583|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z47810-3|CAD91632.1| 1520|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z47810-2|CAD89730.3| 1654|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z47810-1|CAD91631.1| 1234|Caenorhabditis elegans Hypothetical pr... 29 3.0
U80026-2|AAY86280.1| 122|Caenorhabditis elegans Hypothetical pr... 29 3.0
U40938-4|AAK68283.1| 447|Caenorhabditis elegans Cyclophilin fam... 29 3.0
U40938-3|AAA81696.1| 466|Caenorhabditis elegans Cyclophilin fam... 29 3.0
U31078-1|AAC47130.1| 466|Caenorhabditis elegans cyclophilin iso... 29 3.0
AF504312-1|AAM22693.1| 1583|Caenorhabditis elegans adaptor prote... 29 3.0
AF099003-3|ABA00149.1| 759|Caenorhabditis elegans Hypothetical ... 29 3.0
Z34799-4|CAD44130.2| 691|Caenorhabditis elegans Hypothetical pr... 29 4.0
Z81041-11|CAJ90515.1| 713|Caenorhabditis elegans Hypothetical p... 29 5.3
Z81041-10|CAB02785.3| 743|Caenorhabditis elegans Hypothetical p... 29 5.3
U41039-2|AAX88821.1| 141|Caenorhabditis elegans Saposin-like pr... 29 5.3
Z81111-6|CAB03269.1| 332|Caenorhabditis elegans Hypothetical pr... 28 9.2
Z75713-4|CAB00050.1| 603|Caenorhabditis elegans Hypothetical pr... 28 9.2
U97006-1|AAC47965.1| 2076|Caenorhabditis elegans Hypothetical pr... 28 9.2
U41009-8|AAA82282.2| 500|Caenorhabditis elegans Hypothetical pr... 28 9.2
>U70855-1|AAB09161.1| 390|Caenorhabditis elegans Hypothetical
protein K08F11.3 protein.
Length = 390
Score = 48.4 bits (110), Expect = 6e-06
Identities = 38/134 (28%), Positives = 68/134 (50%), Gaps = 8/134 (5%)
Frame = -1
Query: 717 ELIKQVLEAPGVHVFGELLEMPNIKELESGPYATHLKTLNLFAYGTYKDYIE----NK-- 556
E ++ + P F L + +K L++ L LF GT KDY E N
Sbjct: 214 ECVRTAVVDPKSFSFDHLERLSAVKALKTSD-PLMFTALELFISGTLKDYKEFVAKNPKF 272
Query: 555 -SDYLELT-TVQCKKLQHLTIATLATQEKCIPYSVLLEELDIKNVRDLEDLIIEAIYADI 382
+++L++ T+ KK++ LT+ +LA ++ I L ++LDI LE+ +I+AI +
Sbjct: 273 VTEHLKVDETILLKKIRLLTLMSLAEEKNEISLDELAKQLDILADETLEEFVIDAIQVNA 332
Query: 381 IHGKLDQECKRVEV 340
I GK+++ + + V
Sbjct: 333 ISGKINEMARTLIV 346
>Z93395-2|CAB07705.1| 905|Caenorhabditis elegans Hypothetical
protein ZC101.1 protein.
Length = 905
Score = 31.5 bits (68), Expect = 0.75
Identities = 17/66 (25%), Positives = 34/66 (51%)
Frame = -1
Query: 243 SVDQHIQRANHQKQKAIRHQQGIEQKILYIKKTLKTQAENDESASGANAEPHSAPKKNSS 64
+ +Q QR +HQ Q+A +HQQ E++ ++ + Q E + A+ H +++ S
Sbjct: 634 TTEQQHQRQHHQAQQAQQHQQQQERQQQERQQHERQQQERQQQDRQQQAQQHHQAQQHHS 693
Query: 63 KSKTAR 46
+ A+
Sbjct: 694 QQHPAQ 699
>Z83112-5|CAB05541.1| 905|Caenorhabditis elegans Hypothetical
protein ZC101.1 protein.
Length = 905
Score = 31.5 bits (68), Expect = 0.75
Identities = 17/66 (25%), Positives = 34/66 (51%)
Frame = -1
Query: 243 SVDQHIQRANHQKQKAIRHQQGIEQKILYIKKTLKTQAENDESASGANAEPHSAPKKNSS 64
+ +Q QR +HQ Q+A +HQQ E++ ++ + Q E + A+ H +++ S
Sbjct: 634 TTEQQHQRQHHQAQQAQQHQQQQERQQQERQQHERQQQERQQQDRQQQAQQHHQAQQHHS 693
Query: 63 KSKTAR 46
+ A+
Sbjct: 694 QQHPAQ 699
>Z70287-1|CAA94302.3| 294|Caenorhabditis elegans Hypothetical
protein R09E10.1 protein.
Length = 294
Score = 30.7 bits (66), Expect = 1.3
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -1
Query: 615 HLKTLNLFAYGTYKDYIENKSDYLELTTVQCKKLQ 511
HLK + F YG Y Y++ K D L++ Q + Q
Sbjct: 209 HLKRVKKFLYGQYPKYVDMKRDLLKIVKQQKPEAQ 243
>Z49130-6|CAA88971.1| 387|Caenorhabditis elegans Hypothetical
protein T06D8.8 protein.
Length = 387
Score = 30.7 bits (66), Expect = 1.3
Identities = 29/117 (24%), Positives = 50/117 (42%), Gaps = 9/117 (7%)
Frame = -1
Query: 684 VHVFGELLEMPNIKELESGPYATHLKTLNLFAYGTYKDYIENKSDY------LELTTVQC 523
VH FGELL P +K LE + L F G + + D+ +
Sbjct: 219 VHNFGELLAHPILKSLEGTRERWIVDVLLAFNSGDLTRFFSLEGDWGGWDDLKKQKDFLT 278
Query: 522 KKLQHLTIATLATQEKCIPYSVLLEELDIK---NVRDLEDLIIEAIYADIIHGKLDQ 361
K++ + + LA SV +E+ K ++E L+++A+ D+I G ++Q
Sbjct: 279 AKIRLMAVMELAVSRPTKARSVSFKEIATKCQIPFDEVEFLVMKALSKDLIRGDINQ 335
>Z93778-3|CAB07846.1| 446|Caenorhabditis elegans Hypothetical
protein C31H5.6 protein.
Length = 446
Score = 29.5 bits (63), Expect = 3.0
Identities = 19/73 (26%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = -1
Query: 540 LTTVQCKKLQHLTIATLATQEKCIPYSVLLEELDIKNVRDLEDLIIEAIYADI-IHGKLD 364
L T C K T+ + T+E IP+ + +E + + ++DL +I++++ I KL
Sbjct: 298 LVTAPCFK----TLTPILTEENSIPWHWIPKETAFRLIGSVDDLCAPSIHSNLHIQKKLQ 353
Query: 363 QECKRVEVDVALG 325
+ VE+++ G
Sbjct: 354 ETGHYVELELVNG 366
>Z50109-13|CAD44092.1| 1549|Caenorhabditis elegans Hypothetical
protein F45E10.1b protein.
Length = 1549
Score = 29.5 bits (63), Expect = 3.0
Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Frame = -1
Query: 258 EAVLNSVDQHIQRANHQKQKAIRHQQGIEQKILYIKKTLKTQAENDESASGANAEP--HS 85
E L + QHI R+N + ++AIR +Q I A +E A +P S
Sbjct: 890 EQKLRKLTQHIDRSNLKPEEAIRFRQDIAHLRDISNHLASNSAHANEGAGELLRQPSLES 949
Query: 84 APKKNSSKSKTARNS 40
SS S ++++S
Sbjct: 950 VASHRSSMSSSSKSS 964
>Z50109-12|CAD44091.1| 1583|Caenorhabditis elegans Hypothetical
protein F45E10.1a protein.
Length = 1583
Score = 29.5 bits (63), Expect = 3.0
Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Frame = -1
Query: 258 EAVLNSVDQHIQRANHQKQKAIRHQQGIEQKILYIKKTLKTQAENDESASGANAEP--HS 85
E L + QHI R+N + ++AIR +Q I A +E A +P S
Sbjct: 931 EQKLRKLTQHIDRSNLKPEEAIRFRQDIAHLRDISNHLASNSAHANEGAGELLRQPSLES 990
Query: 84 APKKNSSKSKTARNS 40
SS S ++++S
Sbjct: 991 VASHRSSMSSSSKSS 1005
>Z50109-11|CAD91624.1| 1520|Caenorhabditis elegans Hypothetical
protein F45E10.1d protein.
Length = 1520
Score = 29.5 bits (63), Expect = 3.0
Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Frame = -1
Query: 258 EAVLNSVDQHIQRANHQKQKAIRHQQGIEQKILYIKKTLKTQAENDESASGANAEP--HS 85
E L + QHI R+N + ++AIR +Q I A +E A +P S
Sbjct: 868 EQKLRKLTQHIDRSNLKPEEAIRFRQDIAHLRDISNHLASNSAHANEGAGELLRQPSLES 927
Query: 84 APKKNSSKSKTARNS 40
SS S ++++S
Sbjct: 928 VASHRSSMSSSSKSS 942
>Z50109-10|CAD89729.3| 1654|Caenorhabditis elegans Hypothetical
protein F45E10.1c protein.
Length = 1654
Score = 29.5 bits (63), Expect = 3.0
Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Frame = -1
Query: 258 EAVLNSVDQHIQRANHQKQKAIRHQQGIEQKILYIKKTLKTQAENDESASGANAEP--HS 85
E L + QHI R+N + ++AIR +Q I A +E A +P S
Sbjct: 1002 EQKLRKLTQHIDRSNLKPEEAIRFRQDIAHLRDISNHLASNSAHANEGAGELLRQPSLES 1061
Query: 84 APKKNSSKSKTARNS 40
SS S ++++S
Sbjct: 1062 VASHRSSMSSSSKSS 1076
>Z47810-5|CAD44133.1| 1549|Caenorhabditis elegans Hypothetical protein
F45E10.1b protein.
Length = 1549
Score = 29.5 bits (63), Expect = 3.0
Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Frame = -1
Query: 258 EAVLNSVDQHIQRANHQKQKAIRHQQGIEQKILYIKKTLKTQAENDESASGANAEP--HS 85
E L + QHI R+N + ++AIR +Q I A +E A +P S
Sbjct: 890 EQKLRKLTQHIDRSNLKPEEAIRFRQDIAHLRDISNHLASNSAHANEGAGELLRQPSLES 949
Query: 84 APKKNSSKSKTARNS 40
SS S ++++S
Sbjct: 950 VASHRSSMSSSSKSS 964
>Z47810-4|CAD44132.1| 1583|Caenorhabditis elegans Hypothetical protein
F45E10.1a protein.
Length = 1583
Score = 29.5 bits (63), Expect = 3.0
Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Frame = -1
Query: 258 EAVLNSVDQHIQRANHQKQKAIRHQQGIEQKILYIKKTLKTQAENDESASGANAEP--HS 85
E L + QHI R+N + ++AIR +Q I A +E A +P S
Sbjct: 931 EQKLRKLTQHIDRSNLKPEEAIRFRQDIAHLRDISNHLASNSAHANEGAGELLRQPSLES 990
Query: 84 APKKNSSKSKTARNS 40
SS S ++++S
Sbjct: 991 VASHRSSMSSSSKSS 1005
>Z47810-3|CAD91632.1| 1520|Caenorhabditis elegans Hypothetical protein
F45E10.1d protein.
Length = 1520
Score = 29.5 bits (63), Expect = 3.0
Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Frame = -1
Query: 258 EAVLNSVDQHIQRANHQKQKAIRHQQGIEQKILYIKKTLKTQAENDESASGANAEP--HS 85
E L + QHI R+N + ++AIR +Q I A +E A +P S
Sbjct: 868 EQKLRKLTQHIDRSNLKPEEAIRFRQDIAHLRDISNHLASNSAHANEGAGELLRQPSLES 927
Query: 84 APKKNSSKSKTARNS 40
SS S ++++S
Sbjct: 928 VASHRSSMSSSSKSS 942
>Z47810-2|CAD89730.3| 1654|Caenorhabditis elegans Hypothetical protein
F45E10.1c protein.
Length = 1654
Score = 29.5 bits (63), Expect = 3.0
Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Frame = -1
Query: 258 EAVLNSVDQHIQRANHQKQKAIRHQQGIEQKILYIKKTLKTQAENDESASGANAEP--HS 85
E L + QHI R+N + ++AIR +Q I A +E A +P S
Sbjct: 1002 EQKLRKLTQHIDRSNLKPEEAIRFRQDIAHLRDISNHLASNSAHANEGAGELLRQPSLES 1061
Query: 84 APKKNSSKSKTARNS 40
SS S ++++S
Sbjct: 1062 VASHRSSMSSSSKSS 1076
>Z47810-1|CAD91631.1| 1234|Caenorhabditis elegans Hypothetical
protein F45E10.1e protein.
Length = 1234
Score = 29.5 bits (63), Expect = 3.0
Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Frame = -1
Query: 258 EAVLNSVDQHIQRANHQKQKAIRHQQGIEQKILYIKKTLKTQAENDESASGANAEP--HS 85
E L + QHI R+N + ++AIR +Q I A +E A +P S
Sbjct: 582 EQKLRKLTQHIDRSNLKPEEAIRFRQDIAHLRDISNHLASNSAHANEGAGELLRQPSLES 641
Query: 84 APKKNSSKSKTARNS 40
SS S ++++S
Sbjct: 642 VASHRSSMSSSSKSS 656
>U80026-2|AAY86280.1| 122|Caenorhabditis elegans Hypothetical
protein EGAP9.4 protein.
Length = 122
Score = 29.5 bits (63), Expect = 3.0
Identities = 12/46 (26%), Positives = 24/46 (52%)
Frame = -1
Query: 276 DWCNACEAVLNSVDQHIQRANHQKQKAIRHQQGIEQKILYIKKTLK 139
+WC C A NS+D+ Q + Q + +Q I + ++ ++ L+
Sbjct: 69 EWCPLCGAEFNSIDECSQHQTAEHQDQDKKKQAINKLLVALEWCLR 114
>U40938-4|AAK68283.1| 447|Caenorhabditis elegans Cyclophilin family
protein 8, isoformb protein.
Length = 447
Score = 29.5 bits (63), Expect = 3.0
Identities = 17/74 (22%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = -1
Query: 258 EAVLNSVDQHIQRANHQKQKAIRHQQGIEQK-ILYIKKTLKTQAENDESASGANAEPHSA 82
E V + ++R + ++ ++ QQ E+ +++ ++ +ENDES ++
Sbjct: 367 ERVERQNQRELERQKQEAERELKRQQENEESGNRRRRRSSRSGSENDESELEEPKNRSAS 426
Query: 81 PKKNSSKSKTARNS 40
P+K SS S ++ +S
Sbjct: 427 PRKRSSSSSSSSSS 440
>U40938-3|AAA81696.1| 466|Caenorhabditis elegans Cyclophilin family
protein 8, isoforma protein.
Length = 466
Score = 29.5 bits (63), Expect = 3.0
Identities = 17/74 (22%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = -1
Query: 258 EAVLNSVDQHIQRANHQKQKAIRHQQGIEQK-ILYIKKTLKTQAENDESASGANAEPHSA 82
E V + ++R + ++ ++ QQ E+ +++ ++ +ENDES ++
Sbjct: 386 ERVERQNQRELERQKQEAERELKRQQENEESGNRRRRRSSRSGSENDESELEEPKNRSAS 445
Query: 81 PKKNSSKSKTARNS 40
P+K SS S ++ +S
Sbjct: 446 PRKRSSSSSSSSSS 459
>U31078-1|AAC47130.1| 466|Caenorhabditis elegans cyclophilin
isoform 8 protein.
Length = 466
Score = 29.5 bits (63), Expect = 3.0
Identities = 17/74 (22%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = -1
Query: 258 EAVLNSVDQHIQRANHQKQKAIRHQQGIEQK-ILYIKKTLKTQAENDESASGANAEPHSA 82
E V + ++R + ++ ++ QQ E+ +++ ++ +ENDES ++
Sbjct: 386 ERVERQNQRELERQKQEAERELKRQQENEESGNRRRRRSSRSGSENDESELEEPKNRSAS 445
Query: 81 PKKNSSKSKTARNS 40
P+K SS S ++ +S
Sbjct: 446 PRKRSSSSSSSSSS 459
>AF504312-1|AAM22693.1| 1583|Caenorhabditis elegans adaptor protein
UNC-53 protein.
Length = 1583
Score = 29.5 bits (63), Expect = 3.0
Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Frame = -1
Query: 258 EAVLNSVDQHIQRANHQKQKAIRHQQGIEQKILYIKKTLKTQAENDESASGANAEP--HS 85
E L + QHI R+N + ++AIR +Q I A +E A +P S
Sbjct: 931 EQKLRKLTQHIDRSNLKPEEAIRFRQDIAHLRDISNHLASNSAHANEGAGELLRQPSLES 990
Query: 84 APKKNSSKSKTARNS 40
SS S ++++S
Sbjct: 991 VASHRSSMSSSSKSS 1005
>AF099003-3|ABA00149.1| 759|Caenorhabditis elegans Hypothetical
protein Y59C2A.3 protein.
Length = 759
Score = 29.5 bits (63), Expect = 3.0
Identities = 19/72 (26%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
Frame = -1
Query: 306 DAASIADVLADWCNACEAVLNSVDQHIQRANHQKQKAIR---HQQGIEQKILYIKKTLKT 136
D A +L + A L + + ++ A ++ +A R HQ E+K+ Y ++ +T
Sbjct: 334 DKARCQRMLEEERKALSENLEAAREKVKEAKAKRAEAARIRYHQMSDEEKVAYNRRKYET 393
Query: 135 QAENDESASGAN 100
Q DE AN
Sbjct: 394 QKRRDEGFFMAN 405
>Z34799-4|CAD44130.2| 691|Caenorhabditis elegans Hypothetical
protein F34D10.7 protein.
Length = 691
Score = 29.1 bits (62), Expect = 4.0
Identities = 26/109 (23%), Positives = 56/109 (51%), Gaps = 2/109 (1%)
Frame = -1
Query: 513 QHLTIATLATQEKCIPYSVLLEELDIKNVRDLEDLIIEAIYADIIHGKLDQECKRVEVDV 334
Q L + ++ ++ + ++ +L ++DLE+ I + I+ I GKL++ D+
Sbjct: 182 QRLNVRSM--KDNAVMNQLISGQLSRPLLQDLEEDIYDWIHTGNI-GKLEELVLTGYADL 238
Query: 333 ALGRDARLEDAASIA--DVLADWCNACEAVLNSVDQHIQRANHQKQKAI 193
LGR+ ++DA SI +VL + +A + S+ + ++ N + K +
Sbjct: 239 LLGRNHEVDDADSIGFLEVLPQY----QAKIQSIHKAVETGNLRAVKLL 283
>Z81041-11|CAJ90515.1| 713|Caenorhabditis elegans Hypothetical
protein C27A7.3b protein.
Length = 713
Score = 28.7 bits (61), Expect = 5.3
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +3
Query: 513 VISCTGLWLILNSPICSQCS 572
+I+CTG WL N P+C + S
Sbjct: 627 LITCTGNWLSTNPPLCKKYS 646
>Z81041-10|CAB02785.3| 743|Caenorhabditis elegans Hypothetical
protein C27A7.3a protein.
Length = 743
Score = 28.7 bits (61), Expect = 5.3
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +3
Query: 513 VISCTGLWLILNSPICSQCS 572
+I+CTG WL N P+C + S
Sbjct: 657 LITCTGNWLSTNPPLCKKYS 676
>U41039-2|AAX88821.1| 141|Caenorhabditis elegans Saposin-like
protein family protein22 protein.
Length = 141
Score = 28.7 bits (61), Expect = 5.3
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -1
Query: 588 YGTYKDYIENKSDYLELTTVQCKKLQH 508
YG D+I+ K D++E+ + C+ L H
Sbjct: 62 YGVNYDFIQLKKDFIEMIRLDCEALFH 88
>Z81111-6|CAB03269.1| 332|Caenorhabditis elegans Hypothetical
protein T01G5.7 protein.
Length = 332
Score = 27.9 bits (59), Expect = 9.2
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Frame = -1
Query: 669 ELLEMPNI-KEL--ESGPYATHLKTLNLFAYGTYKDYIENKSDYLELTTVQCKKL 514
+L+ M N+ +EL ++ Y + L++ + Y TY + + KSD EL Q KKL
Sbjct: 123 QLIMMANLGEELGNDAKRYRSELESAHEELYQTYTIFDKEKSDLCELIEEQTKKL 177
>Z75713-4|CAB00050.1| 603|Caenorhabditis elegans Hypothetical
protein T01G9.3 protein.
Length = 603
Score = 27.9 bits (59), Expect = 9.2
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -3
Query: 559 QIGLFRINHSPVQEITASDHCNT 491
Q+ + ++H+ +QEITA CNT
Sbjct: 257 QLSVLDLSHNSIQEITACAFCNT 279
>U97006-1|AAC47965.1| 2076|Caenorhabditis elegans Hypothetical protein
C13F10.4 protein.
Length = 2076
Score = 27.9 bits (59), Expect = 9.2
Identities = 24/93 (25%), Positives = 35/93 (37%)
Frame = -1
Query: 489 ATQEKCIPYSVLLEELDIKNVRDLEDLIIEAIYADIIHGKLDQECKRVEVDVALGRDARL 310
A K + Y L E+ K L++ ++ D+I L C + V ARL
Sbjct: 845 ALTAKLLSYKTLCEQRGHK----LDNETLQRASFDLISSSLSNSCPMTRL-VGAEALARL 899
Query: 309 EDAASIADVLADWCNACEAVLNSVDQHIQRANH 211
A + +A C LNS I R+ H
Sbjct: 900 SQAVNSPPFVASIAQYCFDKLNSCKDEINRSGH 932
>U41009-8|AAA82282.2| 500|Caenorhabditis elegans Hypothetical
protein C06E7.4 protein.
Length = 500
Score = 27.9 bits (59), Expect = 9.2
Identities = 13/59 (22%), Positives = 28/59 (47%)
Frame = -1
Query: 216 NHQKQKAIRHQQGIEQKILYIKKTLKTQAENDESASGANAEPHSAPKKNSSKSKTARNS 40
NH + ++H Q I+ I KT++ + E E +EP ++++ ++ +S
Sbjct: 263 NHHNHQQLQHHQVIKSPQPPITKTIEVKVERSEKVEQQVSEPTKRAPPTAAQTASSTSS 321
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,111,016
Number of Sequences: 27780
Number of extensions: 381310
Number of successful extensions: 1246
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 1186
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1246
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2019417216
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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