Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_pT_H19
(663 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC119.13c |prp31||U4/U6 x U5 tri-snRNP complex subunit Prp31|S... 29 0.79
SPBC29A10.01 |ccr1|SPBC365.17|NADPH-cytochrome p450 reductase |S... 27 2.4
SPAC4D7.01c |sec71|sec7a, SPAP8A3.15c|Sec7 domain|Schizosaccharo... 27 3.2
SPCC162.07 |ent1||epsin|Schizosaccharomyces pombe|chr 3|||Manual 27 3.2
SPAC19B12.03 |bgs3||1,3-beta-glucan synthase subunit Bgs3|Schizo... 27 3.2
SPBC29A3.06 |||CGI-48 family|Schizosaccharomyces pombe|chr 2|||M... 26 4.2
SPBC28E12.06c |lvs1|SPBC3H7.16|beige protein homolog|Schizosacch... 26 5.6
SPAC2C4.07c |||ribonuclease II |Schizosaccharomyces pombe|chr 1|... 25 7.4
SPBC1709.02c |vas2|SPBC1734.18c|valine-tRNA ligase Vas2 |Schizos... 25 7.4
SPBC428.07 |meu6||meiotic chromosome segregation protein Meu6|Sc... 25 7.4
SPAC823.12 |||zinc finger protein Pep5/Vps11 |Schizosaccharomyce... 25 7.4
SPAC11D3.07c |||transcription factor|Schizosaccharomyces pombe|c... 25 7.4
SPAC1A6.05c |||triacylglycerol lipase|Schizosaccharomyces pombe|... 25 9.7
SPCC970.05 |rpl3601|rpl36-1|60S ribosomal protein L36|Schizosacc... 25 9.7
SPAC25G10.02 |cce1|ydc2|mitochondrial cruciform cutting endonucl... 25 9.7
SPAC1D4.03c |aut12||autophagy associated protein Aut12|Schizosac... 25 9.7
SPBC3E7.11c |||DNAJ protein Caj1/Djp1-type|Schizosaccharomyces p... 25 9.7
>SPBC119.13c |prp31||U4/U6 x U5 tri-snRNP complex subunit
Prp31|Schizosaccharomyces pombe|chr 2|||Manual
Length = 518
Score = 28.7 bits (61), Expect = 0.79
Identities = 18/75 (24%), Positives = 36/75 (48%), Gaps = 5/75 (6%)
Frame = -2
Query: 269 LKQGNANCVHLNIDIDITSQVEEQKETSDKIKKRLND---CLLSLMKIDRVLDL--GVEN 105
L++GN L D+DIT + ++ ++ + ND + L+ R+ D+ G E
Sbjct: 39 LEEGNGISAELENDLDITKISDSAQKLPSEVANKFNDNNENIYQLLNSTRLRDIIEGTEK 98
Query: 104 LEFWQKNNLSGYISE 60
+ +K ++G I +
Sbjct: 99 YKGTEKQAITGNIED 113
>SPBC29A10.01 |ccr1|SPBC365.17|NADPH-cytochrome p450 reductase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 678
Score = 27.1 bits (57), Expect = 2.4
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -2
Query: 275 QLLKQGNANCVHLNIDI 225
+L K G+ NC+HL +DI
Sbjct: 278 ELFKSGSRNCLHLELDI 294
>SPAC4D7.01c |sec71|sec7a, SPAP8A3.15c|Sec7
domain|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1811
Score = 26.6 bits (56), Expect = 3.2
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = -2
Query: 527 SFDLDASTSDSFNDRAENGTPTFADELKIYLESFHMDKNRKLVLE 393
+ +++ S+S+ DRA + P+ E K+ LESF K+ V E
Sbjct: 315 TINMNKSSSNGTPDRANSPIPSQLSENKLTLESFEHRKSFDQVRE 359
>SPCC162.07 |ent1||epsin|Schizosaccharomyces pombe|chr 3|||Manual
Length = 706
Score = 26.6 bits (56), Expect = 3.2
Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 7/56 (12%)
Frame = -2
Query: 224 DITSQVEEQKETSDKIKKRLND-------CLLSLMKIDRVLDLGVENLEFWQKNNL 78
++T E E D I +RLND SL ++ L G EN+ W K+N+
Sbjct: 47 ELTYDQNEMLEVMDIIDRRLNDKGKNWRHVFKSLSLLEYCLHNGSENVVRWAKDNI 102
>SPAC19B12.03 |bgs3||1,3-beta-glucan synthase subunit
Bgs3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1826
Score = 26.6 bits (56), Expect = 3.2
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +2
Query: 404 VSGFCPYENSLNRFSVRPRMSG 469
++GFCP+EN R R+SG
Sbjct: 1028 INGFCPFENGRRLPKYRIRLSG 1049
>SPBC29A3.06 |||CGI-48 family|Schizosaccharomyces pombe|chr
2|||Manual
Length = 556
Score = 26.2 bits (55), Expect = 4.2
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = -2
Query: 428 FHMDKNRKLVLENGEKLWIFETVESS-VRRW 339
F D + LVL G ++W F + S VRRW
Sbjct: 357 FTSDGSEMLVLSYGAEVWHFNVEQRSVVRRW 387
>SPBC28E12.06c |lvs1|SPBC3H7.16|beige protein
homolog|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2609
Score = 25.8 bits (54), Expect = 5.6
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = -2
Query: 218 TSQVEEQKETSDKIKKRLNDCLLSLMKIDRVLD 120
TS + E S++++KRL CLL ++D L+
Sbjct: 1626 TSWELDSTEGSERMRKRLMPCLLQSSELDSKLE 1658
>SPAC2C4.07c |||ribonuclease II |Schizosaccharomyces pombe|chr
1|||Manual
Length = 927
Score = 25.4 bits (53), Expect = 7.4
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -2
Query: 530 LSFDLDASTSDSFNDRAENGTPTFADEL 447
++FD DAS+S +FN TF +EL
Sbjct: 696 MNFDFDASSSAAFNASMVRLRSTFNEEL 723
>SPBC1709.02c |vas2|SPBC1734.18c|valine-tRNA ligase Vas2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 980
Score = 25.4 bits (53), Expect = 7.4
Identities = 13/68 (19%), Positives = 29/68 (42%)
Frame = -2
Query: 614 HISLPQESIEQLQKFYDEKRSSRKMKLQLSFDLDASTSDSFNDRAENGTPTFADELKIYL 435
H L +S+ + + +Y +K++ D+ + +++R +N
Sbjct: 178 HAGLSTQSVVEKKLWYTQKKTRHDYPRDKFVDIVWEWKEEYHNRIKNQMSRLGGSFDWTR 237
Query: 434 ESFHMDKN 411
E+F MD+N
Sbjct: 238 EAFTMDEN 245
>SPBC428.07 |meu6||meiotic chromosome segregation protein
Meu6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 651
Score = 25.4 bits (53), Expect = 7.4
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Frame = -2
Query: 224 DITSQVEEQKETSDKIK--KRLNDCLLSLMKI 135
D+ + + ++KET DKIK + ND L L K+
Sbjct: 255 DLKNAIAKKKETKDKIKELRAYNDTLKRLGKL 286
>SPAC823.12 |||zinc finger protein Pep5/Vps11 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 906
Score = 25.4 bits (53), Expect = 7.4
Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 3/61 (4%)
Frame = -2
Query: 248 CVH--LNIDIDITSQVEE-QKETSDKIKKRLNDCLLSLMKIDRVLDLGVENLEFWQKNNL 78
C H LN + ++ S +E S K +N CL + VE EFWQ+ +
Sbjct: 639 CFHIFLNHNSELISFLEGILPNASPNYKTLINTCLFEAYIRESFASSNVEKQEFWQEKSN 698
Query: 77 S 75
S
Sbjct: 699 S 699
>SPAC11D3.07c |||transcription factor|Schizosaccharomyces pombe|chr
1|||Manual
Length = 603
Score = 25.4 bits (53), Expect = 7.4
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = -2
Query: 209 VEEQKETSDKIKKRLNDCLLSLMKIDRVLDLGVENLEFWQKN 84
+E+ ++ + +++RL L KID +LD+ E EF ++N
Sbjct: 63 IEKPEDGEESVQRRLK---LLEEKIDLLLDIATETSEFKREN 101
>SPAC1A6.05c |||triacylglycerol lipase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 483
Score = 25.0 bits (52), Expect = 9.7
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = -2
Query: 158 CLLSLMKIDRVLDLGVENLEFWQKNNLSGYI 66
C+L + ++RV+ L + + F + + SGYI
Sbjct: 228 CVLDISHLERVMKLLIGDFTFQEAYDRSGYI 258
>SPCC970.05 |rpl3601|rpl36-1|60S ribosomal protein
L36|Schizosaccharomyces pombe|chr 3|||Manual
Length = 99
Score = 25.0 bits (52), Expect = 9.7
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 365 SRRSTAFRRFPRPVSGFCPYE 427
S+R++ R R V+GF PYE
Sbjct: 32 SKRTSFVRSIVREVAGFAPYE 52
>SPAC25G10.02 |cce1|ydc2|mitochondrial cruciform cutting
endonuclease Cce1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 258
Score = 25.0 bits (52), Expect = 9.7
Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Frame = -2
Query: 569 YDEKRSSRKMKLQLSFDLDASTSDSFNDRAE--NGTPTFADELKIYLESFHMDKNRKLVL 396
Y EKR+S + K+Q F L S +++ A N +F+ + + +K++
Sbjct: 147 YAEKRNSIEQKIQYPFLLSLSPKSTYSYWASVLNTKASFSKKKSRVQMVKELIDGQKILF 206
Query: 395 ENGEKLW 375
EN E L+
Sbjct: 207 ENEEALY 213
>SPAC1D4.03c |aut12||autophagy associated protein
Aut12|Schizosaccharomyces pombe|chr 1|||Manual
Length = 513
Score = 25.0 bits (52), Expect = 9.7
Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Frame = -2
Query: 503 SDSFNDRAENGTP----TFADELKIYLESFHMDKNRKLVLENGEKLWIFE 366
+ SFND E+ P T + IY+ S+ + K+ L++ + E FE
Sbjct: 315 TQSFNDSMEHWVPVCFPTLNPDAYIYIYSYFLCKDTVLIMGSSESGVFFE 364
>SPBC3E7.11c |||DNAJ protein Caj1/Djp1-type|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 355
Score = 25.0 bits (52), Expect = 9.7
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -1
Query: 201 AEGD-IRQNKEKIE*LFIEFDENRSRPRFGRRKFGVLAE 88
A+GD I+++ ++ L+ D+NR P R KF LAE
Sbjct: 20 ADGDTIKKSYRRLAILYHP-DKNRENPEAAREKFQKLAE 57
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,201,164
Number of Sequences: 5004
Number of extensions: 38080
Number of successful extensions: 175
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 168
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 175
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 301829700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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