Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_pT_H19
(663 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U09506-1|AAA56998.1| 2186|Drosophila melanogaster tiggrin protein. 31 1.4
AE014134-1089|AAF52380.2| 2188|Drosophila melanogaster CG11527-P... 31 1.4
BT001751-1|AAN71506.1| 257|Drosophila melanogaster RH02809p pro... 29 7.5
AY061071-1|AAL28619.1| 250|Drosophila melanogaster LD04103p pro... 29 7.5
AF202990-1|AAG35633.1| 254|Drosophila melanogaster STATHMIN-19 ... 29 7.5
AF202989-1|AAG35632.1| 174|Drosophila melanogaster STATHMIN-13 ... 29 7.5
AF202774-1|AAG35628.1| 257|Drosophila melanogaster stathmin-14 ... 29 7.5
AF202773-1|AAG35627.1| 234|Drosophila melanogaster stathmin-1 p... 29 7.5
AE014134-1054|AAF52345.2| 250|Drosophila melanogaster CG31641-P... 29 7.5
AE014134-1053|AAN10581.1| 302|Drosophila melanogaster CG31641-P... 29 7.5
AE014134-1052|AAN10580.1| 257|Drosophila melanogaster CG31641-P... 29 7.5
BT029686-1|ABL75743.1| 394|Drosophila melanogaster IP17383p pro... 28 9.9
AY160083-1|AAN77520.1| 1910|Drosophila melanogaster alpha1U prot... 28 9.9
>U09506-1|AAA56998.1| 2186|Drosophila melanogaster tiggrin protein.
Length = 2186
Score = 31.1 bits (67), Expect = 1.4
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = -2
Query: 239 LNIDIDITSQVEEQKE-TSDKIKKRLNDCLLSLMKIDRVLDLGVENLEFWQKNNLSGYIS 63
L+ID I Q+ +Q+ T ++++ RLN+ L + VE L+ W K+ L+ +
Sbjct: 1601 LHIDNLINQQLRKQQRWTIEELELRLNNDQKHLQDAVAQYHVTVEELKVWYKDELNRLLE 1660
Query: 62 EKRTVEGKTYS 30
++R G S
Sbjct: 1661 QRRIDRGSGIS 1671
>AE014134-1089|AAF52380.2| 2188|Drosophila melanogaster CG11527-PA
protein.
Length = 2188
Score = 31.1 bits (67), Expect = 1.4
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = -2
Query: 239 LNIDIDITSQVEEQKE-TSDKIKKRLNDCLLSLMKIDRVLDLGVENLEFWQKNNLSGYIS 63
L+ID I Q+ +Q+ T ++++ RLN+ L + VE L+ W K+ L+ +
Sbjct: 1601 LHIDNLINQQLRKQQRWTIEELELRLNNDQKHLQDAVAQYHVTVEELKVWYKDELNRLLE 1660
Query: 62 EKRTVEGKTYS 30
++R G S
Sbjct: 1661 QRRIDRGSGIS 1671
>BT001751-1|AAN71506.1| 257|Drosophila melanogaster RH02809p
protein.
Length = 257
Score = 28.7 bits (61), Expect = 7.5
Identities = 21/78 (26%), Positives = 34/78 (43%), Gaps = 3/78 (3%)
Frame = -2
Query: 596 ESIEQLQKFYDEKRSSRKMKLQLSFDLDASTSDSFNDRAENGTPTFADELKIYLES---F 426
E IEQ K +E+R S + K + + + + T F + K LES
Sbjct: 52 EEIEQKLKAAEERRISLEAKKMADISTKLAKVEEATRKKDEITNEFITQTKEQLESKMEL 111
Query: 425 HMDKNRKLVLENGEKLWI 372
H++K ++ + EKL I
Sbjct: 112 HVEKREAIISDMKEKLKI 129
>AY061071-1|AAL28619.1| 250|Drosophila melanogaster LD04103p
protein.
Length = 250
Score = 28.7 bits (61), Expect = 7.5
Identities = 21/78 (26%), Positives = 34/78 (43%), Gaps = 3/78 (3%)
Frame = -2
Query: 596 ESIEQLQKFYDEKRSSRKMKLQLSFDLDASTSDSFNDRAENGTPTFADELKIYLES---F 426
E IEQ K +E+R S + K + + + + T F + K LES
Sbjct: 97 EEIEQKLKAAEERRISLEAKKMADISTKLAKVEEATRKKDEITNEFITQTKEQLESKMEL 156
Query: 425 HMDKNRKLVLENGEKLWI 372
H++K ++ + EKL I
Sbjct: 157 HVEKREAIISDMKEKLKI 174
>AF202990-1|AAG35633.1| 254|Drosophila melanogaster STATHMIN-19
protein.
Length = 254
Score = 28.7 bits (61), Expect = 7.5
Identities = 21/78 (26%), Positives = 34/78 (43%), Gaps = 3/78 (3%)
Frame = -2
Query: 596 ESIEQLQKFYDEKRSSRKMKLQLSFDLDASTSDSFNDRAENGTPTFADELKIYLES---F 426
E IEQ K +E+R S + K + + + + T F + K LES
Sbjct: 49 EEIEQKLKAAEERRISLEAKKMADISTKLAKVEEATRKKDEITNEFITQTKEQLESKMEL 108
Query: 425 HMDKNRKLVLENGEKLWI 372
H++K ++ + EKL I
Sbjct: 109 HVEKREAIISDMKEKLKI 126
>AF202989-1|AAG35632.1| 174|Drosophila melanogaster STATHMIN-13
protein.
Length = 174
Score = 28.7 bits (61), Expect = 7.5
Identities = 21/78 (26%), Positives = 34/78 (43%), Gaps = 3/78 (3%)
Frame = -2
Query: 596 ESIEQLQKFYDEKRSSRKMKLQLSFDLDASTSDSFNDRAENGTPTFADELKIYLES---F 426
E IEQ K +E+R S + K + + + + T F + K LES
Sbjct: 52 EEIEQKLKAAEERRISLEAKKMADISTKLAKVEEATRKKDEITNEFITQTKEQLESKMEL 111
Query: 425 HMDKNRKLVLENGEKLWI 372
H++K ++ + EKL I
Sbjct: 112 HVEKREAIISDMKEKLKI 129
>AF202774-1|AAG35628.1| 257|Drosophila melanogaster stathmin-14
protein.
Length = 257
Score = 28.7 bits (61), Expect = 7.5
Identities = 21/78 (26%), Positives = 34/78 (43%), Gaps = 3/78 (3%)
Frame = -2
Query: 596 ESIEQLQKFYDEKRSSRKMKLQLSFDLDASTSDSFNDRAENGTPTFADELKIYLES---F 426
E IEQ K +E+R S + K + + + + T F + K LES
Sbjct: 52 EEIEQKLKAAEERRISLEAKKMADISTKLAKVEEATRKKDEITNEFITQTKEQLESKMEL 111
Query: 425 HMDKNRKLVLENGEKLWI 372
H++K ++ + EKL I
Sbjct: 112 HVEKREAIISDMKEKLKI 129
>AF202773-1|AAG35627.1| 234|Drosophila melanogaster stathmin-1
protein.
Length = 234
Score = 28.7 bits (61), Expect = 7.5
Identities = 21/78 (26%), Positives = 34/78 (43%), Gaps = 3/78 (3%)
Frame = -2
Query: 596 ESIEQLQKFYDEKRSSRKMKLQLSFDLDASTSDSFNDRAENGTPTFADELKIYLES---F 426
E IEQ K +E+R S + K + + + + T F + K LES
Sbjct: 52 EEIEQKLKAAEERRISLEAKKMADISTKLAKVEEATRKKDEITNEFITQTKEQLESKMEL 111
Query: 425 HMDKNRKLVLENGEKLWI 372
H++K ++ + EKL I
Sbjct: 112 HVEKREAIISDMKEKLKI 129
>AE014134-1054|AAF52345.2| 250|Drosophila melanogaster CG31641-PA,
isoform A protein.
Length = 250
Score = 28.7 bits (61), Expect = 7.5
Identities = 21/78 (26%), Positives = 34/78 (43%), Gaps = 3/78 (3%)
Frame = -2
Query: 596 ESIEQLQKFYDEKRSSRKMKLQLSFDLDASTSDSFNDRAENGTPTFADELKIYLES---F 426
E IEQ K +E+R S + K + + + + T F + K LES
Sbjct: 97 EEIEQKLKAAEERRISLEAKKMADISTKLAKVEEATRKKDEITNEFITQTKEQLESKMEL 156
Query: 425 HMDKNRKLVLENGEKLWI 372
H++K ++ + EKL I
Sbjct: 157 HVEKREAIISDMKEKLKI 174
>AE014134-1053|AAN10581.1| 302|Drosophila melanogaster CG31641-PB,
isoform B protein.
Length = 302
Score = 28.7 bits (61), Expect = 7.5
Identities = 21/78 (26%), Positives = 34/78 (43%), Gaps = 3/78 (3%)
Frame = -2
Query: 596 ESIEQLQKFYDEKRSSRKMKLQLSFDLDASTSDSFNDRAENGTPTFADELKIYLES---F 426
E IEQ K +E+R S + K + + + + T F + K LES
Sbjct: 97 EEIEQKLKAAEERRISLEAKKMADISTKLAKVEEATRKKDEITNEFITQTKEQLESKMEL 156
Query: 425 HMDKNRKLVLENGEKLWI 372
H++K ++ + EKL I
Sbjct: 157 HVEKREAIISDMKEKLKI 174
>AE014134-1052|AAN10580.1| 257|Drosophila melanogaster CG31641-PC,
isoform C protein.
Length = 257
Score = 28.7 bits (61), Expect = 7.5
Identities = 21/78 (26%), Positives = 34/78 (43%), Gaps = 3/78 (3%)
Frame = -2
Query: 596 ESIEQLQKFYDEKRSSRKMKLQLSFDLDASTSDSFNDRAENGTPTFADELKIYLES---F 426
E IEQ K +E+R S + K + + + + T F + K LES
Sbjct: 52 EEIEQKLKAAEERRISLEAKKMADISTKLAKVEEATRKKDEITNEFITQTKEQLESKMEL 111
Query: 425 HMDKNRKLVLENGEKLWI 372
H++K ++ + EKL I
Sbjct: 112 HVEKREAIISDMKEKLKI 129
>BT029686-1|ABL75743.1| 394|Drosophila melanogaster IP17383p
protein.
Length = 394
Score = 28.3 bits (60), Expect = 9.9
Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 2/28 (7%)
Frame = +1
Query: 103 KFSTPKSRTRSIFIKLNKQSFN--LFFI 180
KFS PKSR IF + ++Q +N LFF+
Sbjct: 30 KFSMPKSRINQIFKRSSQQIYNVTLFFL 57
>AY160083-1|AAN77520.1| 1910|Drosophila melanogaster alpha1U protein
protein.
Length = 1910
Score = 28.3 bits (60), Expect = 9.9
Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 2/28 (7%)
Frame = +1
Query: 103 KFSTPKSRTRSIFIKLNKQSFN--LFFI 180
KFS PKSR IF + ++Q +N LFF+
Sbjct: 156 KFSMPKSRINQIFKRSSQQIYNVTLFFL 183
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,934,917
Number of Sequences: 53049
Number of extensions: 376403
Number of successful extensions: 1372
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1326
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1372
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2848092300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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