Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_pT_H19
(663 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF125962-2|AAY86293.1| 232|Caenorhabditis elegans Hypothetical ... 31 0.96
AF100664-2|AAC68984.1| 665|Caenorhabditis elegans Hypothetical ... 31 0.96
AF106576-1|AAC78177.2| 664|Caenorhabditis elegans Hypothetical ... 30 1.3
Z81587-3|CAB04700.1| 362|Caenorhabditis elegans Hypothetical pr... 29 2.2
U56961-3|AAK39294.1| 634|Caenorhabditis elegans Hypothetical pr... 29 2.2
AC025727-9|ABD63208.1| 146|Caenorhabditis elegans Hypothetical ... 29 2.9
AC025727-8|AAG23390.2| 223|Caenorhabditis elegans Hypothetical ... 29 2.9
Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical pr... 29 3.9
AF016451-9|AAB66005.2| 524|Caenorhabditis elegans Udp-glucurono... 29 3.9
Z81086-6|CAB03116.1| 610|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z66498-4|CAA91292.1| 142|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z48241-1|CAA88285.1| 346|Caenorhabditis elegans Hypothetical pr... 28 6.8
>AF125962-2|AAY86293.1| 232|Caenorhabditis elegans Hypothetical
protein Y39H10B.2 protein.
Length = 232
Score = 30.7 bits (66), Expect = 0.96
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Frame = -2
Query: 659 LQRRGCXGRMDRYKAHISLPQESIEQLQKFYDE---KRSSRKMKLQLSFDLDAST-SDSF 492
LQR+ C +++ A QE+ E++QK DE K KLQ + D +A T ++
Sbjct: 151 LQRKSCDQNKEKFTALELQLQETNERMQKQLDELNAKFEDVNRKLQKASDCNADTEKENE 210
Query: 491 NDRAENGTPTFADELKIYLES 429
++NGT D + + S
Sbjct: 211 EGVSDNGTDDSWDVVTVQRSS 231
>AF100664-2|AAC68984.1| 665|Caenorhabditis elegans Hypothetical
protein M57.1 protein.
Length = 665
Score = 30.7 bits (66), Expect = 0.96
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +2
Query: 386 RRFPRPVSGFCPYENSLNRFSVRPRMSGFRSLRG 487
+R+PR S F P N N++S+ R+ +LRG
Sbjct: 44 KRYPRFCSHFAPKMNEFNKYSIEERIRLMYALRG 77
>AF106576-1|AAC78177.2| 664|Caenorhabditis elegans Hypothetical
protein W07E6.1 protein.
Length = 664
Score = 30.3 bits (65), Expect = 1.3
Identities = 23/80 (28%), Positives = 38/80 (47%)
Frame = -2
Query: 620 KAHISLPQESIEQLQKFYDEKRSSRKMKLQLSFDLDASTSDSFNDRAENGTPTFADELKI 441
KAH P E +E+LQ D++ + S D D D +D ++ G D L I
Sbjct: 53 KAHEEEPIEQVEKLQLIDDDEDGLEGLSFPGSDDEDLR-DDYSDDDSDAG-----DHLPI 106
Query: 440 YLESFHMDKNRKLVLENGEK 381
+S +DK ++ ++ GE+
Sbjct: 107 EKKSAALDKQKEKIIAEGEE 126
>Z81587-3|CAB04700.1| 362|Caenorhabditis elegans Hypothetical
protein T06G6.4 protein.
Length = 362
Score = 29.5 bits (63), Expect = 2.2
Identities = 22/74 (29%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Frame = -2
Query: 230 DIDITSQVEEQ--KETSDKIKKRLNDCLLSLMKIDRVLDLGVENLEFWQKNNLSGYISEK 57
D+ + +++ E KET DK++ L+ + L + R L+ ++LE QK +S
Sbjct: 119 DLRMRAEIGEDTSKETEDKLRVDLSKTIGVLDFLTRDLESKGKSLEILQK-KVSDLTQRN 177
Query: 56 RTVEGKTYSDYEKH 15
TV +Y YEK+
Sbjct: 178 DTVGFTSYFSYEKY 191
>U56961-3|AAK39294.1| 634|Caenorhabditis elegans Hypothetical
protein T19D7.4 protein.
Length = 634
Score = 29.5 bits (63), Expect = 2.2
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Frame = -2
Query: 245 VHLNIDIDITSQVEEQKETSDKIKKRLNDCLLSLMKIDRVLDLGVENLE----FWQKNN 81
+ LN+DID +Q E Q++ D +K+ +N +D+ L + +LE F QK N
Sbjct: 193 IELNLDIDKMNQTEIQRQVDDALKQLVNPFKEKGQLVDQ-LQTQITDLERFVNFLQKEN 250
>AC025727-9|ABD63208.1| 146|Caenorhabditis elegans Hypothetical
protein Y73E7A.1b protein.
Length = 146
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/71 (23%), Positives = 34/71 (47%)
Frame = -2
Query: 620 KAHISLPQESIEQLQKFYDEKRSSRKMKLQLSFDLDASTSDSFNDRAENGTPTFADELKI 441
+AHI + +E E++ + +EKR K++++ DL + + E D LK+
Sbjct: 19 RAHIHIRKEDEERINRELEEKRKQEAQKIEVAGDLLVENLNKL-EVEEGEARNVDDALKV 77
Query: 440 YLESFHMDKNR 408
E +D ++
Sbjct: 78 LGEEKALDDDK 88
>AC025727-8|AAG23390.2| 223|Caenorhabditis elegans Hypothetical
protein Y73E7A.1a protein.
Length = 223
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/71 (23%), Positives = 34/71 (47%)
Frame = -2
Query: 620 KAHISLPQESIEQLQKFYDEKRSSRKMKLQLSFDLDASTSDSFNDRAENGTPTFADELKI 441
+AHI + +E E++ + +EKR K++++ DL + + E D LK+
Sbjct: 96 RAHIHIRKEDEERINRELEEKRKQEAQKIEVAGDLLVENLNKL-EVEEGEARNVDDALKV 154
Query: 440 YLESFHMDKNR 408
E +D ++
Sbjct: 155 LGEEKALDDDK 165
>Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical
protein T28C6.9 protein.
Length = 1861
Score = 28.7 bits (61), Expect = 3.9
Identities = 11/46 (23%), Positives = 25/46 (54%)
Frame = -2
Query: 614 HISLPQESIEQLQKFYDEKRSSRKMKLQLSFDLDASTSDSFNDRAE 477
H+ + QE EQ+ +++ K+K++ +L+ S++F + E
Sbjct: 452 HVLMVQEMTEQIASMHEKNDEMEKLKVEQMKELEKWKSEAFTSKQE 497
>AF016451-9|AAB66005.2| 524|Caenorhabditis elegans
Udp-glucuronosyltransferase protein51 protein.
Length = 524
Score = 28.7 bits (61), Expect = 3.9
Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Frame = -2
Query: 242 HLNIDIDITSQVEEQKETSDKIKKRLNDCLL--SLMKIDRVLDLGVENLEFWQKNN 81
HL+ + ++E+ T D + R+ND K DR LG +N W K N
Sbjct: 35 HLDFGDSLIDSLKEKGHTVDLVIARINDLAKGNENSKADRFYTLGFKNGSSWHKLN 90
>Z81086-6|CAB03116.1| 610|Caenorhabditis elegans Hypothetical
protein F53B6.6 protein.
Length = 610
Score = 27.9 bits (59), Expect = 6.8
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +1
Query: 46 STVLFSLM*PLRLFFCQNSKFSTPKSRTRSIFIKLNKQSFNLF 174
STV+FS L LF C KF + R R + +K+ + F
Sbjct: 568 STVIFSTAILLALFCCVTVKFLVTRQRNRQLLHHASKRRIDNF 610
>Z66498-4|CAA91292.1| 142|Caenorhabditis elegans Hypothetical
protein M195.4 protein.
Length = 142
Score = 27.9 bits (59), Expect = 6.8
Identities = 23/77 (29%), Positives = 39/77 (50%)
Frame = -2
Query: 611 ISLPQESIEQLQKFYDEKRSSRKMKLQLSFDLDASTSDSFNDRAENGTPTFADELKIYLE 432
I +P ES+++ +K D + RK K++ F + S D ++ E+ +D+ K
Sbjct: 73 IKMPTESMKK-KKNTDNEIDKRK-KMKTGFYQEKSDEDDTLEKIESLKVEQSDKTK---- 126
Query: 431 SFHMDKNRKLVLENGEK 381
+ +KL LENGEK
Sbjct: 127 ---KSQKKKLTLENGEK 140
>Z48241-1|CAA88285.1| 346|Caenorhabditis elegans Hypothetical
protein C32A3.2 protein.
Length = 346
Score = 27.9 bits (59), Expect = 6.8
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +1
Query: 112 TPKSRTRSIFIKLNKQSFNLFF 177
TPKSRTR +F + SF+LFF
Sbjct: 22 TPKSRTRVLFSQYFFLSFSLFF 43
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,099,987
Number of Sequences: 27780
Number of extensions: 207115
Number of successful extensions: 858
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 823
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 858
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1486926498
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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