Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_pT_H14
         (891 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_0027 - 195879-196093,196242-196278,196985-197041,197519-19...    54   2e-07

>07_01_0027 -
           195879-196093,196242-196278,196985-197041,197519-197680,
           198653-198760
          Length = 192

 Score = 53.6 bits (123), Expect = 2e-07
 Identities = 25/48 (52%), Positives = 34/48 (70%)
 Frame = -1

Query: 312 IGYIKTQKVVLLEDLAAHFKLKTQAAIDRITELQASGELTGVIDXQGK 169
           + YIK QK V LEDLAA F+++TQ  I+RI  L+    L+GV+D +GK
Sbjct: 86  VEYIKNQKCVPLEDLAAEFRMRTQDCINRIITLEGMDRLSGVMDDRGK 133



 Score = 52.4 bits (120), Expect = 5e-07
 Identities = 23/42 (54%), Positives = 33/42 (78%)
 Frame = -2

Query: 176 RGKFIYISQSELESIAKFIKQRGRVSIAELAECSNDLINLAP 51
           RGKFIYIS  E++++A +I+++GRVSI+ LA  SN  I+L P
Sbjct: 131 RGKFIYISTEEMKAVADYIRKQGRVSISHLASNSNQFIDLEP 172


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,871,892
Number of Sequences: 37544
Number of extensions: 218095
Number of successful extensions: 438
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 431
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 438
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2506954360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)