Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_pT_H14
         (891 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC011851-1|AAH11851.1|  314|Homo sapiens chromosome 20 open read...    60   1e-08
BC007957-1|AAH07957.1|  314|Homo sapiens chromosome 20 open read...    60   1e-08
BC000643-1|AAH00643.1|  314|Homo sapiens chromosome 20 open read...    60   1e-08
AY358989-1|AAQ89348.1|  315|Homo sapiens VGPW2523 protein.             60   1e-08
AL121891-7|CAD55939.1|  314|Homo sapiens chromosome 20 open read...    60   1e-08
AL121891-8|CAD55940.1|  298|Homo sapiens chromosome 20 open read...    34   0.80 

>BC011851-1|AAH11851.1|  314|Homo sapiens chromosome 20 open reading
           frame 116 protein.
          Length = 314

 Score = 59.7 bits (138), Expect = 1e-08
 Identities = 31/54 (57%), Positives = 38/54 (70%)
 Frame = -1

Query: 312 IGYIKTQKVVLLEDLAAHFKLKTQAAIDRITELQASGELTGVIDXQGKIHLYFT 151
           I YIK  KVVLLEDLA+   L+TQ  I+RI +L A G +TGVID +GK  +Y T
Sbjct: 220 INYIKQSKVVLLEDLASQVGLRTQDTINRIQDLLAEGTITGVIDDRGKF-IYIT 272



 Score = 58.4 bits (135), Expect = 3e-08
 Identities = 27/38 (71%), Positives = 32/38 (84%)
 Frame = -2

Query: 176 RGKFIYISQSELESIAKFIKQRGRVSIAELAECSNDLI 63
           RGKFIYI+  EL ++A FI+QRGRVSIAELA+ SN LI
Sbjct: 265 RGKFIYITPEELAAVANFIRQRGRVSIAELAQASNSLI 302


>BC007957-1|AAH07957.1|  314|Homo sapiens chromosome 20 open reading
           frame 116 protein.
          Length = 314

 Score = 59.7 bits (138), Expect = 1e-08
 Identities = 31/54 (57%), Positives = 38/54 (70%)
 Frame = -1

Query: 312 IGYIKTQKVVLLEDLAAHFKLKTQAAIDRITELQASGELTGVIDXQGKIHLYFT 151
           I YIK  KVVLLEDLA+   L+TQ  I+RI +L A G +TGVID +GK  +Y T
Sbjct: 220 INYIKQSKVVLLEDLASQVGLRTQDTINRIQDLLAEGTITGVIDDRGKF-IYIT 272



 Score = 58.4 bits (135), Expect = 3e-08
 Identities = 27/38 (71%), Positives = 32/38 (84%)
 Frame = -2

Query: 176 RGKFIYISQSELESIAKFIKQRGRVSIAELAECSNDLI 63
           RGKFIYI+  EL ++A FI+QRGRVSIAELA+ SN LI
Sbjct: 265 RGKFIYITPEELAAVANFIRQRGRVSIAELAQASNSLI 302


>BC000643-1|AAH00643.1|  314|Homo sapiens chromosome 20 open reading
           frame 116 protein.
          Length = 314

 Score = 59.7 bits (138), Expect = 1e-08
 Identities = 31/54 (57%), Positives = 38/54 (70%)
 Frame = -1

Query: 312 IGYIKTQKVVLLEDLAAHFKLKTQAAIDRITELQASGELTGVIDXQGKIHLYFT 151
           I YIK  KVVLLEDLA+   L+TQ  I+RI +L A G +TGVID +GK  +Y T
Sbjct: 220 INYIKQSKVVLLEDLASQVGLRTQDTINRIQDLLAEGTITGVIDDRGKF-IYIT 272



 Score = 58.4 bits (135), Expect = 3e-08
 Identities = 27/38 (71%), Positives = 32/38 (84%)
 Frame = -2

Query: 176 RGKFIYISQSELESIAKFIKQRGRVSIAELAECSNDLI 63
           RGKFIYI+  EL ++A FI+QRGRVSIAELA+ SN LI
Sbjct: 265 RGKFIYITPEELAAVANFIRQRGRVSIAELAQASNSLI 302


>AY358989-1|AAQ89348.1|  315|Homo sapiens VGPW2523 protein.
          Length = 315

 Score = 59.7 bits (138), Expect = 1e-08
 Identities = 32/54 (59%), Positives = 37/54 (68%)
 Frame = -1

Query: 312 IGYIKTQKVVLLEDLAAHFKLKTQAAIDRITELQASGELTGVIDXQGKIHLYFT 151
           I YIK  KVVLLEDLA    L+TQ AI+RI +L   G LTGVID +GK  +Y T
Sbjct: 221 INYIKKSKVVLLEDLAFQMGLRTQDAINRIQDLLTEGTLTGVIDDRGKF-IYIT 273



 Score = 57.2 bits (132), Expect = 7e-08
 Identities = 26/39 (66%), Positives = 32/39 (82%)
 Frame = -2

Query: 176 RGKFIYISQSELESIAKFIKQRGRVSIAELAECSNDLIN 60
           RGKFIYI+  EL ++A FI+QRGRVSI ELA+ SN LI+
Sbjct: 266 RGKFIYITPEELAAVANFIRQRGRVSITELAQASNSLIS 304


>AL121891-7|CAD55939.1|  314|Homo sapiens chromosome 20 open reading
           frame 116 protein.
          Length = 314

 Score = 59.7 bits (138), Expect = 1e-08
 Identities = 31/54 (57%), Positives = 38/54 (70%)
 Frame = -1

Query: 312 IGYIKTQKVVLLEDLAAHFKLKTQAAIDRITELQASGELTGVIDXQGKIHLYFT 151
           I YIK  KVVLLEDLA+   L+TQ  I+RI +L A G +TGVID +GK  +Y T
Sbjct: 220 INYIKQSKVVLLEDLASQVGLRTQDTINRIQDLLAEGTITGVIDDRGKF-IYIT 272



 Score = 58.4 bits (135), Expect = 3e-08
 Identities = 27/38 (71%), Positives = 32/38 (84%)
 Frame = -2

Query: 176 RGKFIYISQSELESIAKFIKQRGRVSIAELAECSNDLI 63
           RGKFIYI+  EL ++A FI+QRGRVSIAELA+ SN LI
Sbjct: 265 RGKFIYITPEELAAVANFIRQRGRVSIAELAQASNSLI 302


>AL121891-8|CAD55940.1|  298|Homo sapiens chromosome 20 open reading
           frame 116 protein.
          Length = 298

 Score = 33.9 bits (74), Expect = 0.80
 Identities = 16/26 (61%), Positives = 19/26 (73%)
 Frame = -1

Query: 312 IGYIKTQKVVLLEDLAAHFKLKTQAA 235
           I YIK  KVVLLEDLA+   L+TQ +
Sbjct: 220 INYIKQSKVVLLEDLASQVGLRTQVS 245


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,584,776
Number of Sequences: 237096
Number of extensions: 1250728
Number of successful extensions: 2131
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2073
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2127
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11437206932
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)