Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_pT_H11
         (851 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0207 - 21985340-21985570,21986430-21986636,21999578-219996...    32   0.50 
10_01_0133 + 1621574-1625779                                           31   1.5  
06_01_0244 - 1844161-1844241,1844356-1844394,1844510-1844617,184...    31   1.5  
08_01_0207 - 1647168-1647251,1647583-1647726,1648176-1648287,164...    30   2.7  

>03_05_0207 -
           21985340-21985570,21986430-21986636,21999578-21999667,
           21999764-21999945,22000130-22001042,22003184-22003266,
           22004622-22004939,22005044-22005107
          Length = 695

 Score = 32.3 bits (70), Expect = 0.50
 Identities = 14/42 (33%), Positives = 25/42 (59%)
 Frame = -3

Query: 756 SCKYKDKNKTLKELKWYEKRAAFRTEARKKLEHELFGENNAN 631
           +C+ ++KNK L+ELK    +   + E   + + +LF E+N N
Sbjct: 419 ACQIEEKNKYLEELKLMNNQNGLKLERMMEEKDQLFEEHNRN 460


>10_01_0133 + 1621574-1625779
          Length = 1401

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 14/48 (29%), Positives = 25/48 (52%)
 Frame = +3

Query: 579  WHDIVHVYSYVGSTNWPY*HCFLQIVHAPVSS*PLFERLPFSHTTSIL 722
            ++ ++ +  +V    W   H F Q+    VS+ P+ + LPFSH   +L
Sbjct: 929  FNGMLSMVEWVSGNTW---HLFSQLEQVKVSNCPVLKELPFSHDLKLL 973


>06_01_0244 -
           1844161-1844241,1844356-1844394,1844510-1844617,
           1844638-1844685,1845058-1845111,1845214-1845268,
           1845442-1845522,1846238-1846615,1847196-1847401
          Length = 349

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 18/55 (32%), Positives = 29/55 (52%)
 Frame = +2

Query: 332 FSQMMPFDKWQYFLKYVFV*SNSLKLLYKH*REKLYYYFIISMVNKKKVLPNKFN 496
           F+Q+   DK +  L  V V  N + ++ +   +KLYY+F+I + N     PN  N
Sbjct: 234 FNQLWRADK-RIILSLVAVHLNLMTMMEQQLIDKLYYFFLIKLQNVNLKHPNDTN 287


>08_01_0207 -
           1647168-1647251,1647583-1647726,1648176-1648287,
           1648392-1648573,1648649-1648780,1648900-1649856,
           1649949-1650734
          Length = 798

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 20/77 (25%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
 Frame = -3

Query: 813 DLNAFGEVSDTKVVINELKSCKYKDKNKTLKELKWYEKRAAFRTEARKKLEHELFGENNA 634
           D+   GE    K +I E+ +  YKD    +  +KW +    F  + R  L+H  + E  A
Sbjct: 585 DVETQGEF--VKSLIKEVTNAAYKDIEDVVAFVKWLDDELGFLVDERAVLKHFDWPERKA 642

Query: 633 N---KASWYFRRMNKRE 592
           +   +A++ ++ + K E
Sbjct: 643 DTLREAAFGYQDLKKLE 659


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,109,232
Number of Sequences: 37544
Number of extensions: 282813
Number of successful extensions: 606
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 595
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 606
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2373961368
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)