Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_pT_H07
         (888 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0014 + 84379-84600,84737-84830,84935-85086,85212-85299,853...    30   2.8  
02_05_0863 + 32313890-32314132,32314227-32314517,32315157-323154...    29   4.9  

>01_01_0014 +
           84379-84600,84737-84830,84935-85086,85212-85299,
           85348-86681,87291-87398,87500-87583
          Length = 693

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 10/35 (28%), Positives = 23/35 (65%)
 Frame = +2

Query: 449 TIQQVNLKQSFITKNKVCLKKREIEIFVHYMTNFN 553
           T +++N+  S ++  K+CL + +   FVH+ ++F+
Sbjct: 140 TKEEINISSSHLSSTKMCLSRCQRSRFVHHPSSFS 174


>02_05_0863 +
           32313890-32314132,32314227-32314517,32315157-32315493,
           32315944-32316278,32316763-32317010,32317296-32317881,
           32317970-32318083,32318165-32318287,32318325-32318531
          Length = 827

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 21/64 (32%), Positives = 29/64 (45%)
 Frame = +1

Query: 520 RNICTLHDKFQQH*LSHVDYTSNYSKFRKLKYSFGTNLKHRKKIGNQYSISLN*LHLSFK 699
           + +C LH+K +Q   S +D  +N  KF     S  T+LK  KK        L   H   K
Sbjct: 180 KELCKLHEKLEQRKSSLLDTIANQKKFLS---SLPTHLKSLKKASLPVQQQLGMQHTK-K 235

Query: 700 LELH 711
           L+ H
Sbjct: 236 LKQH 239


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,055,079
Number of Sequences: 37544
Number of extensions: 358085
Number of successful extensions: 625
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 615
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 625
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2495239620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)