Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_pT_H05
(758 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U90223-1|AAB94642.1| 252|Homo sapiens deoxyuridine triphosphate... 186 8e-47
U62891-1|AAC51123.1| 164|Homo sapiens deoxyuridine triphosphata... 186 8e-47
U31930-1|AAC50418.1| 164|Homo sapiens deoxyuridine nucleotidohy... 186 8e-47
M89913-1|AAA58444.1| 141|Homo sapiens dUTP pyrophosphatase prot... 186 8e-47
L11877-1|AAA36801.1| 141|Homo sapiens dUTP nucleotidohydrolase ... 186 8e-47
CR541781-1|CAG46580.1| 164|Homo sapiens DUT protein. 186 8e-47
CR541720-1|CAG46521.1| 164|Homo sapiens DUT protein. 186 8e-47
BC110377-1|AAI10378.1| 252|Homo sapiens dUTP pyrophosphatase pr... 186 8e-47
BC070339-1|AAH70339.1| 252|Homo sapiens dUTP pyrophosphatase pr... 186 8e-47
BC033645-1|AAH33645.1| 164|Homo sapiens dUTP pyrophosphatase pr... 186 8e-47
AY935242-1|AAX14045.1| 164|Homo sapiens dUTP pyrophosphatase pr... 186 8e-47
AF018432-2|AAB71394.1| 164|Homo sapiens dUTPase protein. 186 8e-47
AF018432-1|AAB71393.1| 252|Homo sapiens dUTPase protein. 186 8e-47
AB049113-1|BAB13724.1| 164|Homo sapiens dUTP pyrophosphatase pr... 186 8e-47
AF090907-1|AAF24030.1| 73|Homo sapiens PRO0245 protein. 75 4e-13
AF164615-1|AAD51799.1| 1117|Homo sapiens Gag-Pro-Pol protein pro... 48 5e-05
AF164611-1|AAD51793.1| 2294|Homo sapiens Gag-Pro-Pol-Env protein... 47 6e-05
DQ058014-1|AAY87452.1| 273|Homo sapiens protease protein. 46 1e-04
AF164609-1|AAD51791.1| 1177|Homo sapiens Gag-Pro-Pol protein pro... 45 3e-04
AF164613-1|AAD51796.1| 1755|Homo sapiens Gag-Pro-Pol protein pro... 44 6e-04
AF074086-6|AAD21096.1| 333|Homo sapiens protease protein. 44 6e-04
AF074086-2|AAF88166.1| 333|Homo sapiens protease protein. 44 6e-04
AK074181-1|BAB85007.1| 225|Homo sapiens FLJ00254 protein protein. 43 0.001
AF164614-1|AAD51797.1| 1879|Homo sapiens Gag-Pro-Pol protein pro... 43 0.001
AK131011-1|BAC85476.1| 134|Homo sapiens protein ( Homo sapiens ... 37 0.091
U90224-2|AAB93867.1| 51|Homo sapiens deoxyuridine triphosphate... 36 0.21
U90224-1|AAB93866.1| 139|Homo sapiens deoxyuridine triphosphate... 36 0.21
>U90223-1|AAB94642.1| 252|Homo sapiens deoxyuridine triphosphate
nucleotidohydrolase precursor protein.
Length = 252
Score = 186 bits (453), Expect = 8e-47
Identities = 91/132 (68%), Positives = 101/132 (76%)
Frame = -3
Query: 399 LKFTRLSENAFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAPR 220
L+F RLSE+A P RGS +AAG DL SAYDYT+P K +VKTD+QI LP GCYGRVAPR
Sbjct: 114 LRFARLSEHATAPTRGSARAAGYDLYSAYDYTIPPMEKAVVKTDIQIALPSGCYGRVAPR 173
Query: 219 SGLALKNFIDVGAGVIDEDYRGNVGVVLFXHSDTDFSVKKGDRIAQLICEKXDEPV*QEV 40
SGLA K+FIDVGAGVIDEDYRGNVGVVLF F VKKGDRIAQLICE+ P +EV
Sbjct: 174 SGLAAKHFIDVGAGVIDEDYRGNVGVVLFNFGKEKFEVKKGDRIAQLICERIFYPEIEEV 233
Query: 39 ANLAGTQRGDGG 4
L T+RG GG
Sbjct: 234 QALDDTERGSGG 245
>U62891-1|AAC51123.1| 164|Homo sapiens deoxyuridine triphosphatase
protein.
Length = 164
Score = 186 bits (453), Expect = 8e-47
Identities = 91/132 (68%), Positives = 101/132 (76%)
Frame = -3
Query: 399 LKFTRLSENAFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAPR 220
L+F RLSE+A P RGS +AAG DL SAYDYT+P K +VKTD+QI LP GCYGRVAPR
Sbjct: 26 LRFARLSEHATAPTRGSARAAGYDLYSAYDYTIPPMEKAVVKTDIQIALPSGCYGRVAPR 85
Query: 219 SGLALKNFIDVGAGVIDEDYRGNVGVVLFXHSDTDFSVKKGDRIAQLICEKXDEPV*QEV 40
SGLA K+FIDVGAGVIDEDYRGNVGVVLF F VKKGDRIAQLICE+ P +EV
Sbjct: 86 SGLAAKHFIDVGAGVIDEDYRGNVGVVLFNFGKEKFEVKKGDRIAQLICERIFYPEIEEV 145
Query: 39 ANLAGTQRGDGG 4
L T+RG GG
Sbjct: 146 QALDDTERGSGG 157
>U31930-1|AAC50418.1| 164|Homo sapiens deoxyuridine
nucleotidohydrolase protein.
Length = 164
Score = 186 bits (453), Expect = 8e-47
Identities = 91/132 (68%), Positives = 101/132 (76%)
Frame = -3
Query: 399 LKFTRLSENAFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAPR 220
L+F RLSE+A P RGS +AAG DL SAYDYT+P K +VKTD+QI LP GCYGRVAPR
Sbjct: 26 LRFARLSEHATAPTRGSARAAGYDLYSAYDYTIPPMEKAVVKTDIQIALPSGCYGRVAPR 85
Query: 219 SGLALKNFIDVGAGVIDEDYRGNVGVVLFXHSDTDFSVKKGDRIAQLICEKXDEPV*QEV 40
SGLA K+FIDVGAGVIDEDYRGNVGVVLF F VKKGDRIAQLICE+ P +EV
Sbjct: 86 SGLAAKHFIDVGAGVIDEDYRGNVGVVLFNFGKEKFEVKKGDRIAQLICERIFYPEIEEV 145
Query: 39 ANLAGTQRGDGG 4
L T+RG GG
Sbjct: 146 QALDDTERGSGG 157
>M89913-1|AAA58444.1| 141|Homo sapiens dUTP pyrophosphatase
protein.
Length = 141
Score = 186 bits (453), Expect = 8e-47
Identities = 91/132 (68%), Positives = 101/132 (76%)
Frame = -3
Query: 399 LKFTRLSENAFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAPR 220
L+F RLSE+A P RGS +AAG DL SAYDYT+P K +VKTD+QI LP GCYGRVAPR
Sbjct: 3 LRFARLSEHATAPTRGSARAAGYDLYSAYDYTIPPMEKAVVKTDIQIALPSGCYGRVAPR 62
Query: 219 SGLALKNFIDVGAGVIDEDYRGNVGVVLFXHSDTDFSVKKGDRIAQLICEKXDEPV*QEV 40
SGLA K+FIDVGAGVIDEDYRGNVGVVLF F VKKGDRIAQLICE+ P +EV
Sbjct: 63 SGLAAKHFIDVGAGVIDEDYRGNVGVVLFNFGKEKFEVKKGDRIAQLICERIFYPEIEEV 122
Query: 39 ANLAGTQRGDGG 4
L T+RG GG
Sbjct: 123 QALDDTERGSGG 134
>L11877-1|AAA36801.1| 141|Homo sapiens dUTP nucleotidohydrolase
protein.
Length = 141
Score = 186 bits (453), Expect = 8e-47
Identities = 91/132 (68%), Positives = 101/132 (76%)
Frame = -3
Query: 399 LKFTRLSENAFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAPR 220
L+F RLSE+A P RGS +AAG DL SAYDYT+P K +VKTD+QI LP GCYGRVAPR
Sbjct: 3 LRFARLSEHATAPTRGSARAAGYDLYSAYDYTIPPMEKAVVKTDIQIALPSGCYGRVAPR 62
Query: 219 SGLALKNFIDVGAGVIDEDYRGNVGVVLFXHSDTDFSVKKGDRIAQLICEKXDEPV*QEV 40
SGLA K+FIDVGAGVIDEDYRGNVGVVLF F VKKGDRIAQLICE+ P +EV
Sbjct: 63 SGLAAKHFIDVGAGVIDEDYRGNVGVVLFNFGKEKFEVKKGDRIAQLICERIFYPEIEEV 122
Query: 39 ANLAGTQRGDGG 4
L T+RG GG
Sbjct: 123 QALDDTERGSGG 134
>CR541781-1|CAG46580.1| 164|Homo sapiens DUT protein.
Length = 164
Score = 186 bits (453), Expect = 8e-47
Identities = 91/132 (68%), Positives = 101/132 (76%)
Frame = -3
Query: 399 LKFTRLSENAFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAPR 220
L+F RLSE+A P RGS +AAG DL SAYDYT+P K +VKTD+QI LP GCYGRVAPR
Sbjct: 26 LRFARLSEHATAPTRGSARAAGYDLYSAYDYTIPPMEKAVVKTDIQIALPSGCYGRVAPR 85
Query: 219 SGLALKNFIDVGAGVIDEDYRGNVGVVLFXHSDTDFSVKKGDRIAQLICEKXDEPV*QEV 40
SGLA K+FIDVGAGVIDEDYRGNVGVVLF F VKKGDRIAQLICE+ P +EV
Sbjct: 86 SGLAAKHFIDVGAGVIDEDYRGNVGVVLFNFGKEKFEVKKGDRIAQLICERIFYPEIEEV 145
Query: 39 ANLAGTQRGDGG 4
L T+RG GG
Sbjct: 146 QALDDTERGSGG 157
>CR541720-1|CAG46521.1| 164|Homo sapiens DUT protein.
Length = 164
Score = 186 bits (453), Expect = 8e-47
Identities = 91/132 (68%), Positives = 101/132 (76%)
Frame = -3
Query: 399 LKFTRLSENAFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAPR 220
L+F RLSE+A P RGS +AAG DL SAYDYT+P K +VKTD+QI LP GCYGRVAPR
Sbjct: 26 LRFARLSEHATAPTRGSARAAGYDLYSAYDYTIPPMEKAVVKTDIQIALPSGCYGRVAPR 85
Query: 219 SGLALKNFIDVGAGVIDEDYRGNVGVVLFXHSDTDFSVKKGDRIAQLICEKXDEPV*QEV 40
SGLA K+FIDVGAGVIDEDYRGNVGVVLF F VKKGDRIAQLICE+ P +EV
Sbjct: 86 SGLAAKHFIDVGAGVIDEDYRGNVGVVLFNFGKEKFEVKKGDRIAQLICERIFYPEIEEV 145
Query: 39 ANLAGTQRGDGG 4
L T+RG GG
Sbjct: 146 QALDDTERGSGG 157
>BC110377-1|AAI10378.1| 252|Homo sapiens dUTP pyrophosphatase
protein.
Length = 252
Score = 186 bits (453), Expect = 8e-47
Identities = 91/132 (68%), Positives = 101/132 (76%)
Frame = -3
Query: 399 LKFTRLSENAFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAPR 220
L+F RLSE+A P RGS +AAG DL SAYDYT+P K +VKTD+QI LP GCYGRVAPR
Sbjct: 114 LRFARLSEHATAPTRGSARAAGYDLYSAYDYTIPPMEKAVVKTDIQIALPSGCYGRVAPR 173
Query: 219 SGLALKNFIDVGAGVIDEDYRGNVGVVLFXHSDTDFSVKKGDRIAQLICEKXDEPV*QEV 40
SGLA K+FIDVGAGVIDEDYRGNVGVVLF F VKKGDRIAQLICE+ P +EV
Sbjct: 174 SGLAAKHFIDVGAGVIDEDYRGNVGVVLFNFGKEKFEVKKGDRIAQLICERIFYPEIEEV 233
Query: 39 ANLAGTQRGDGG 4
L T+RG GG
Sbjct: 234 QALDDTERGSGG 245
>BC070339-1|AAH70339.1| 252|Homo sapiens dUTP pyrophosphatase
protein.
Length = 252
Score = 186 bits (453), Expect = 8e-47
Identities = 91/132 (68%), Positives = 101/132 (76%)
Frame = -3
Query: 399 LKFTRLSENAFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAPR 220
L+F RLSE+A P RGS +AAG DL SAYDYT+P K +VKTD+QI LP GCYGRVAPR
Sbjct: 114 LRFARLSEHATAPTRGSARAAGYDLYSAYDYTIPPMEKAVVKTDIQIALPSGCYGRVAPR 173
Query: 219 SGLALKNFIDVGAGVIDEDYRGNVGVVLFXHSDTDFSVKKGDRIAQLICEKXDEPV*QEV 40
SGLA K+FIDVGAGVIDEDYRGNVGVVLF F VKKGDRIAQLICE+ P +EV
Sbjct: 174 SGLAAKHFIDVGAGVIDEDYRGNVGVVLFNFGKEKFEVKKGDRIAQLICERIFYPEIEEV 233
Query: 39 ANLAGTQRGDGG 4
L T+RG GG
Sbjct: 234 QALDDTERGSGG 245
>BC033645-1|AAH33645.1| 164|Homo sapiens dUTP pyrophosphatase
protein.
Length = 164
Score = 186 bits (453), Expect = 8e-47
Identities = 91/132 (68%), Positives = 101/132 (76%)
Frame = -3
Query: 399 LKFTRLSENAFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAPR 220
L+F RLSE+A P RGS +AAG DL SAYDYT+P K +VKTD+QI LP GCYGRVAPR
Sbjct: 26 LRFARLSEHATAPTRGSARAAGYDLYSAYDYTIPPMEKAVVKTDIQIALPSGCYGRVAPR 85
Query: 219 SGLALKNFIDVGAGVIDEDYRGNVGVVLFXHSDTDFSVKKGDRIAQLICEKXDEPV*QEV 40
SGLA K+FIDVGAGVIDEDYRGNVGVVLF F VKKGDRIAQLICE+ P +EV
Sbjct: 86 SGLAAKHFIDVGAGVIDEDYRGNVGVVLFNFGKEKFEVKKGDRIAQLICERIFYPEIEEV 145
Query: 39 ANLAGTQRGDGG 4
L T+RG GG
Sbjct: 146 QALDDTERGSGG 157
>AY935242-1|AAX14045.1| 164|Homo sapiens dUTP pyrophosphatase
protein.
Length = 164
Score = 186 bits (453), Expect = 8e-47
Identities = 91/132 (68%), Positives = 101/132 (76%)
Frame = -3
Query: 399 LKFTRLSENAFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAPR 220
L+F RLSE+A P RGS +AAG DL SAYDYT+P K +VKTD+QI LP GCYGRVAPR
Sbjct: 26 LRFARLSEHATAPTRGSARAAGYDLYSAYDYTIPPMEKAVVKTDIQIALPSGCYGRVAPR 85
Query: 219 SGLALKNFIDVGAGVIDEDYRGNVGVVLFXHSDTDFSVKKGDRIAQLICEKXDEPV*QEV 40
SGLA K+FIDVGAGVIDEDYRGNVGVVLF F VKKGDRIAQLICE+ P +EV
Sbjct: 86 SGLAAKHFIDVGAGVIDEDYRGNVGVVLFNFGKEKFEVKKGDRIAQLICERIFYPEIEEV 145
Query: 39 ANLAGTQRGDGG 4
L T+RG GG
Sbjct: 146 QALDDTERGSGG 157
>AF018432-2|AAB71394.1| 164|Homo sapiens dUTPase protein.
Length = 164
Score = 186 bits (453), Expect = 8e-47
Identities = 91/132 (68%), Positives = 101/132 (76%)
Frame = -3
Query: 399 LKFTRLSENAFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAPR 220
L+F RLSE+A P RGS +AAG DL SAYDYT+P K +VKTD+QI LP GCYGRVAPR
Sbjct: 26 LRFARLSEHATAPTRGSARAAGYDLYSAYDYTIPPMEKAVVKTDIQIALPSGCYGRVAPR 85
Query: 219 SGLALKNFIDVGAGVIDEDYRGNVGVVLFXHSDTDFSVKKGDRIAQLICEKXDEPV*QEV 40
SGLA K+FIDVGAGVIDEDYRGNVGVVLF F VKKGDRIAQLICE+ P +EV
Sbjct: 86 SGLAAKHFIDVGAGVIDEDYRGNVGVVLFNFGKEKFEVKKGDRIAQLICERIFYPEIEEV 145
Query: 39 ANLAGTQRGDGG 4
L T+RG GG
Sbjct: 146 QALDDTERGSGG 157
>AF018432-1|AAB71393.1| 252|Homo sapiens dUTPase protein.
Length = 252
Score = 186 bits (453), Expect = 8e-47
Identities = 91/132 (68%), Positives = 101/132 (76%)
Frame = -3
Query: 399 LKFTRLSENAFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAPR 220
L+F RLSE+A P RGS +AAG DL SAYDYT+P K +VKTD+QI LP GCYGRVAPR
Sbjct: 114 LRFARLSEHATAPTRGSARAAGYDLYSAYDYTIPPMEKAVVKTDIQIALPSGCYGRVAPR 173
Query: 219 SGLALKNFIDVGAGVIDEDYRGNVGVVLFXHSDTDFSVKKGDRIAQLICEKXDEPV*QEV 40
SGLA K+FIDVGAGVIDEDYRGNVGVVLF F VKKGDRIAQLICE+ P +EV
Sbjct: 174 SGLAAKHFIDVGAGVIDEDYRGNVGVVLFNFGKEKFEVKKGDRIAQLICERIFYPEIEEV 233
Query: 39 ANLAGTQRGDGG 4
L T+RG GG
Sbjct: 234 QALDDTERGSGG 245
>AB049113-1|BAB13724.1| 164|Homo sapiens dUTP pyrophosphatase
protein.
Length = 164
Score = 186 bits (453), Expect = 8e-47
Identities = 91/132 (68%), Positives = 101/132 (76%)
Frame = -3
Query: 399 LKFTRLSENAFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAPR 220
L+F RLSE+A P RGS +AAG DL SAYDYT+P K +VKTD+QI LP GCYGRVAPR
Sbjct: 26 LRFARLSEHATAPTRGSARAAGYDLYSAYDYTIPPMEKAVVKTDIQIALPSGCYGRVAPR 85
Query: 219 SGLALKNFIDVGAGVIDEDYRGNVGVVLFXHSDTDFSVKKGDRIAQLICEKXDEPV*QEV 40
SGLA K+FIDVGAGVIDEDYRGNVGVVLF F VKKGDRIAQLICE+ P +EV
Sbjct: 86 SGLAAKHFIDVGAGVIDEDYRGNVGVVLFNFGKEKFEVKKGDRIAQLICERIFYPEIEEV 145
Query: 39 ANLAGTQRGDGG 4
L T+RG GG
Sbjct: 146 QALDDTERGSGG 157
>AF090907-1|AAF24030.1| 73|Homo sapiens PRO0245 protein.
Length = 73
Score = 74.5 bits (175), Expect = 4e-13
Identities = 38/70 (54%), Positives = 44/70 (62%)
Frame = -3
Query: 399 LKFTRLSENAFQPVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAPR 220
L+F SE A +GS +A G DL AYD T+P K L K D+QI LP GCY RVAP
Sbjct: 3 LRFAPFSEQATTLTQGSTQATGYDLNGAYDDTIPPMEKALGKMDIQIALPSGCYRRVAPW 62
Query: 219 SGLALKNFID 190
GLA K+FID
Sbjct: 63 FGLAAKHFID 72
>AF164615-1|AAD51799.1| 1117|Homo sapiens Gag-Pro-Pol protein
protein.
Length = 1117
Score = 47.6 bits (108), Expect = 5e-05
Identities = 26/76 (34%), Positives = 40/76 (52%)
Frame = -3
Query: 303 VPARGKELVKTDLQIELPPGCYGRVAPRSGLALKNFIDVGAGVIDEDYRGNVGVVLFXHS 124
+P + + T + LP G G + RS L LK + + V+D DY+G + +V+ S
Sbjct: 678 LPGEPPQKIPTGVYGPLPEGTVGLILGRSSLNLKG-VQIHTSVVDSDYKGEIQLVI--SS 734
Query: 123 DTDFSVKKGDRIAQLI 76
+S GDRIAQL+
Sbjct: 735 SVPWSASPGDRIAQLL 750
>AF164611-1|AAD51793.1| 2294|Homo sapiens Gag-Pro-Pol-Env protein
protein.
Length = 2294
Score = 47.2 bits (107), Expect = 6e-05
Identities = 26/76 (34%), Positives = 40/76 (52%)
Frame = -3
Query: 303 VPARGKELVKTDLQIELPPGCYGRVAPRSGLALKNFIDVGAGVIDEDYRGNVGVVLFXHS 124
+P + + T + LP G G + RS L LK + + V+D DY+G + +V+ S
Sbjct: 678 LPGEPPQKIPTGVYGPLPKGTVGLILGRSSLNLKG-VQIHTSVVDSDYKGEIQLVI--SS 734
Query: 123 DTDFSVKKGDRIAQLI 76
+S GDRIAQL+
Sbjct: 735 SIPWSASPGDRIAQLL 750
>DQ058014-1|AAY87452.1| 273|Homo sapiens protease protein.
Length = 273
Score = 46.4 bits (105), Expect = 1e-04
Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 1/90 (1%)
Frame = -3
Query: 342 AAGIDLMSAYDYTV-PARGKELVKTDLQIELPPGCYGRVAPRSGLALKNFIDVGAGVIDE 166
+A +DL + ++ P + + T + LP G + RS L LK + + GV+D
Sbjct: 3 SAAVDLCTIQAVSLLPGEPPQKIPTGVYGPLPERTVGLILGRSSLNLKG-VQIHTGVVDS 61
Query: 165 DYRGNVGVVLFXHSDTDFSVKKGDRIAQLI 76
DY+G + +V+ S +S GDRIA+L+
Sbjct: 62 DYKGEIQLVI--SSSIPWSASPGDRIAELL 89
>AF164609-1|AAD51791.1| 1177|Homo sapiens Gag-Pro-Pol protein
protein.
Length = 1177
Score = 44.8 bits (101), Expect = 3e-04
Identities = 25/76 (32%), Positives = 39/76 (51%)
Frame = -3
Query: 303 VPARGKELVKTDLQIELPPGCYGRVAPRSGLALKNFIDVGAGVIDEDYRGNVGVVLFXHS 124
+P + + T + LP G G + RS L LK + + V+D DY+G + +V+ S
Sbjct: 678 LPGEPPQKIPTGVYGPLPEGTVGLILGRSSLNLKG-VQIHTSVVDSDYKGEIQLVI--SS 734
Query: 123 DTDFSVKKGDRIAQLI 76
+S GDR AQL+
Sbjct: 735 SIPWSASPGDRSAQLL 750
>AF164613-1|AAD51796.1| 1755|Homo sapiens Gag-Pro-Pol protein
protein.
Length = 1755
Score = 44.0 bits (99), Expect = 6e-04
Identities = 25/76 (32%), Positives = 39/76 (51%)
Frame = -3
Query: 303 VPARGKELVKTDLQIELPPGCYGRVAPRSGLALKNFIDVGAGVIDEDYRGNVGVVLFXHS 124
+P + + T + LP G G + RS L LK + + V+D DY+G + +V+ S
Sbjct: 678 LPGEPPQKIPTGVYGPLPEGTVGLILGRSSLNLKG-VQIHTSVVDSDYKGEIQLVI--SS 734
Query: 123 DTDFSVKKGDRIAQLI 76
+S DRIAQL+
Sbjct: 735 SIPWSASPRDRIAQLL 750
>AF074086-6|AAD21096.1| 333|Homo sapiens protease protein.
Length = 333
Score = 44.0 bits (99), Expect = 6e-04
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Frame = -3
Query: 342 AAGIDLMSAYDYTV-PARGKELVKTDLQIELPPGCYGRVAPRSGLALKNFIDVGAGVIDE 166
+A +DL + ++ P + T + LP G G + RS L LK + + V+D
Sbjct: 62 SAAVDLCTIQAVSLLPGEPPQKTPTGVYGPLPKGTVGLILGRSSLNLKG-VQIHTSVVDS 120
Query: 165 DYRGNVGVVLFXHSDTDFSVKKGDRIAQLI 76
DY+G + +V+ S +S DRIAQL+
Sbjct: 121 DYKGEIQLVI--SSSIPWSASPRDRIAQLL 148
>AF074086-2|AAF88166.1| 333|Homo sapiens protease protein.
Length = 333
Score = 44.0 bits (99), Expect = 6e-04
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Frame = -3
Query: 342 AAGIDLMSAYDYTV-PARGKELVKTDLQIELPPGCYGRVAPRSGLALKNFIDVGAGVIDE 166
+A +DL + ++ P + T + LP G G + RS L LK + + V+D
Sbjct: 62 SAAVDLCTIQAVSLLPGEPPQKTPTGVYGPLPKGTVGLILGRSSLNLKG-VQIHTSVVDS 120
Query: 165 DYRGNVGVVLFXHSDTDFSVKKGDRIAQLI 76
DY+G + +V+ S +S DRIAQL+
Sbjct: 121 DYKGEIQLVI--SSSIPWSASPRDRIAQLL 148
>AK074181-1|BAB85007.1| 225|Homo sapiens FLJ00254 protein protein.
Length = 225
Score = 43.2 bits (97), Expect = 0.001
Identities = 25/94 (26%), Positives = 50/94 (53%)
Frame = -3
Query: 363 PVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAPRSGLALKNFIDVG 184
P+ + ++AG++++ +P G + + ++ LP G +G + P S A K + V
Sbjct: 76 PLPATLRSAGLEVLVPEGGMLPP-GDTTISLNWKLRLPTGHFGLLLPLSQQAKKG-VAVL 133
Query: 183 AGVIDEDYRGNVGVVLFXHSDTDFSVKKGDRIAQ 82
AGVID DY+ + ++L S +++ GD + +
Sbjct: 134 AGVIDLDYQDEISLLLHNRSKKEYAWNTGDPLGR 167
>AF164614-1|AAD51797.1| 1879|Homo sapiens Gag-Pro-Pol protein
protein.
Length = 1879
Score = 42.7 bits (96), Expect = 0.001
Identities = 25/76 (32%), Positives = 38/76 (50%)
Frame = -3
Query: 303 VPARGKELVKTDLQIELPPGCYGRVAPRSGLALKNFIDVGAGVIDEDYRGNVGVVLFXHS 124
+P + T + LP G G + RS L LK + + V+D DY+G + +V+ S
Sbjct: 678 LPGEPPQKTPTGVYGPLPKGTVGLILGRSSLNLKG-VQIHTSVVDSDYKGEIQLVI--SS 734
Query: 123 DTDFSVKKGDRIAQLI 76
+S DRIAQL+
Sbjct: 735 SIPWSASPRDRIAQLL 750
>AK131011-1|BAC85476.1| 134|Homo sapiens protein ( Homo sapiens
cDNA FLJ27501 fis, clone TST06374. ).
Length = 134
Score = 36.7 bits (81), Expect = 0.091
Identities = 25/95 (26%), Positives = 45/95 (47%)
Frame = -3
Query: 363 PVRGSEKAAGIDLMSAYDYTVPARGKELVKTDLQIELPPGCYGRVAPRSGLALKNFIDVG 184
PV + +AG++++ +P + +L++ LPPG +G + P S A K + V
Sbjct: 14 PVPATLLSAGLEVLVPDGGRLPPGDTTTIPLNLKLRLPPGYFGLLLPLSQQAKKG-VTVL 72
Query: 183 AGVIDEDYRGNVGVVLFXHSDTDFSVKKGDRIAQL 79
AG+I DY + + L D++ G + L
Sbjct: 73 AGMI--DYHDEISLPLHNGGKEDYAWNTGYPLGHL 105
>U90224-2|AAB93867.1| 51|Homo sapiens deoxyuridine triphosphate
nucleotidohydrolase, nuclear isoform protein.
Length = 51
Score = 35.5 bits (78), Expect = 0.21
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = -3
Query: 399 LKFTRLSENAFQPVRGSEKAAGIDL 325
L+F RLSE+A P RGS +AAG DL
Sbjct: 26 LRFARLSEHATAPTRGSARAAGYDL 50
>U90224-1|AAB93866.1| 139|Homo sapiens deoxyuridine triphosphate
nucleotidohydrolase, mitochondrial isoform protein.
Length = 139
Score = 35.5 bits (78), Expect = 0.21
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = -3
Query: 399 LKFTRLSENAFQPVRGSEKAAGIDL 325
L+F RLSE+A P RGS +AAG DL
Sbjct: 114 LRFARLSEHATAPTRGSARAAGYDL 138
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,328,695
Number of Sequences: 237096
Number of extensions: 1444640
Number of successful extensions: 2182
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 2157
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2180
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9183116696
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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