Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_pT_H02
(861 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_05_0295 - 23912502-23912507,23912631-23912712,23913020-239131... 198 6e-51
01_01_1138 - 9019049-9019159,9019525-9019606,9020059-9020177,902... 193 1e-49
07_01_0844 + 6855195-6855342,6855752-6855802,6856460-6856530,685... 191 5e-49
07_01_0842 + 6840943-6841288,6841800-6841970,6842762-6842832,684... 191 5e-49
03_06_0420 + 33794045-33794192,33794831-33794901,33795093-337952... 191 5e-49
01_06_1108 + 34574299-34574446,34575000-34575070,34575246-345753... 187 9e-48
02_05_0413 + 28773869-28773925,28774045-28774135,28774515-287746... 134 9e-32
10_08_1062 + 22626262-22626318,22626404-22626494,22626601-226267... 132 5e-31
11_06_0218 + 21361975-21362314,21362463-21362545,21363870-213639... 122 3e-28
08_01_0921 + 9075409-9075511,9075606-9075689,9075744-9075806,907... 114 7e-26
06_01_0098 + 818374-818427,818537-818627,818753-818868,818962-81... 112 4e-25
03_03_0224 + 15580944-15581036,15581630-15581770,15582385-155824... 81 1e-15
07_03_1298 - 25592788-25592890,25593126-25593229,25593747-255938... 78 1e-14
02_02_0711 - 13180406-13180423,13180483-13180563,13181026-131811... 72 7e-13
02_01_0226 + 1476529-1476585,1477207-1477297,1478247-1478362,147... 61 1e-09
03_02_0046 - 5255513-5255630,5255715-5255876,5256579-5256733,525... 60 2e-09
01_03_0154 + 13269335-13269463,13269597-13269728,13270704-13271024 58 9e-09
12_02_0764 - 22973675-22973995,22975626-22975757,22977074-22977202 58 1e-08
02_05_0639 - 30552148-30552265,30552362-30552523,30553177-305532... 55 6e-08
01_01_1068 - 8413269-8413589,8414011-8414262,8417472-8417603,841... 49 6e-06
06_01_0853 + 6486027-6486158,6486561-6486692,6486974-6486978,648... 47 2e-05
11_01_0455 + 3517281-3519798,3519888-3520261 31 1.6
01_06_1603 - 38564330-38564341,38564608-38564835 30 2.1
09_04_0237 - 15936630-15937250,15937457-15937534,15938874-159389... 29 6.3
04_04_1184 + 31558678-31558707,31559485-31559644,31559732-315603... 29 6.3
04_03_0286 + 13915705-13915984,13916478-13917062,13918188-139186... 28 8.3
01_06_0065 + 26107522-26107700,26110875-26111253 28 8.3
>05_05_0295 -
23912502-23912507,23912631-23912712,23913020-23913138,
23913480-23913599,23913927-23913997,23914525-23914672
Length = 181
Score = 198 bits (482), Expect = 6e-51
Identities = 89/102 (87%), Positives = 97/102 (95%)
Frame = -1
Query: 858 WRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAVLLIFANKQDLPNAMNAA 679
WRHYFQNTQGLIFVVDSNDRER+ EAR+EL RML+EDELRDAVLL+FANKQDLPNAMNAA
Sbjct: 78 WRHYFQNTQGLIFVVDSNDRERVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAA 137
Query: 678 EITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQLKN 553
EITDKLGLHSLR R+WYIQ+TCATSG+GLYEGLDWLSN + N
Sbjct: 138 EITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIAN 179
>01_01_1138 -
9019049-9019159,9019525-9019606,9020059-9020177,
9020977-9021096,9021313-9021383,9021801-9021948
Length = 216
Score = 193 bits (471), Expect = 1e-49
Identities = 86/102 (84%), Positives = 97/102 (95%)
Frame = -1
Query: 858 WRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAVLLIFANKQDLPNAMNAA 679
WRHYFQNTQGLIFVVDSNDR+R+ EAR+EL RML+EDELRDAVLL+FANKQDLPNAMNAA
Sbjct: 78 WRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAA 137
Query: 678 EITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQLKN 553
EITDKLGLHSLR R+WYIQ+TCAT+G+GLYEGLDWLS+ + N
Sbjct: 138 EITDKLGLHSLRQRHWYIQSTCATTGEGLYEGLDWLSSNIAN 179
>07_01_0844 +
6855195-6855342,6855752-6855802,6856460-6856530,
6856736-6856855,6857043-6857161,6857377-6857458,
6857592-6857597
Length = 198
Score = 191 bits (466), Expect = 5e-49
Identities = 85/100 (85%), Positives = 96/100 (96%)
Frame = -1
Query: 858 WRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAVLLIFANKQDLPNAMNAA 679
WRHYFQNTQGLIFVVDSNDR+R+ EAR+EL RML+EDELRDAVLL+FANKQDLPNAMNAA
Sbjct: 95 WRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAA 154
Query: 678 EITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQL 559
EITDKLGLHSLR R+WYIQ+TCAT+G+GLYEGLDWLS+ +
Sbjct: 155 EITDKLGLHSLRQRHWYIQSTCATTGEGLYEGLDWLSSNI 194
>07_01_0842 +
6840943-6841288,6841800-6841970,6842762-6842832,
6843068-6843187,6843654-6843772,6844045-6844126,
6844254-6844259
Length = 304
Score = 191 bits (466), Expect = 5e-49
Identities = 85/100 (85%), Positives = 96/100 (96%)
Frame = -1
Query: 858 WRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAVLLIFANKQDLPNAMNAA 679
WRHYFQNTQGLIFVVDSNDR+R+ EAR+EL RML+EDELRDAVLL+FANKQDLPNAMNAA
Sbjct: 201 WRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAA 260
Query: 678 EITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQL 559
EITDKLGLHSLR R+WYIQ+TCAT+G+GLYEGLDWLS+ +
Sbjct: 261 EITDKLGLHSLRQRHWYIQSTCATTGEGLYEGLDWLSSNI 300
>03_06_0420 +
33794045-33794192,33794831-33794901,33795093-33795212,
33795466-33795584,33795775-33795856,33795984-33795989
Length = 181
Score = 191 bits (466), Expect = 5e-49
Identities = 85/100 (85%), Positives = 96/100 (96%)
Frame = -1
Query: 858 WRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAVLLIFANKQDLPNAMNAA 679
WRHYFQNTQGLIFVVDSNDR+R+ EAR+EL RML+EDELRDAVLL+FANKQDLPNAMNAA
Sbjct: 78 WRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAA 137
Query: 678 EITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQL 559
EITDKLGLHSLR R+WYIQ+TCAT+G+GLYEGLDWLS+ +
Sbjct: 138 EITDKLGLHSLRQRHWYIQSTCATTGEGLYEGLDWLSSNI 177
>01_06_1108 +
34574299-34574446,34575000-34575070,34575246-34575365,
34575471-34575488,34575708-34575826,34576244-34576325,
34576537-34576542
Length = 187
Score = 187 bits (456), Expect = 9e-48
Identities = 88/106 (83%), Positives = 96/106 (90%), Gaps = 6/106 (5%)
Frame = -1
Query: 858 WRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSE------DELRDAVLLIFANKQDLP 697
WRHYFQNTQGLIFVVDSNDRER+ EAR+EL RML+E DELRDAVLL+FANKQDLP
Sbjct: 78 WRHYFQNTQGLIFVVDSNDRERVVEARDELHRMLNELQNWKKDELRDAVLLVFANKQDLP 137
Query: 696 NAMNAAEITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQL 559
NAMNAAEITDKLGLHSLR R+WYIQ+TCATSG+GLYEGLDWLSN +
Sbjct: 138 NAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNI 183
>02_05_0413 +
28773869-28773925,28774045-28774135,28774515-28774630,
28775627-28775686,28775767-28775832,28776499-28776693
Length = 194
Score = 134 bits (324), Expect = 9e-32
Identities = 57/101 (56%), Positives = 78/101 (77%)
Frame = -1
Query: 858 WRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAVLLIFANKQDLPNAMNAA 679
WRHYF NT GLI+VVDS DRERIG+A+ E ++++ + ++V+L+FANKQD+ AM
Sbjct: 78 WRHYFNNTDGLIYVVDSLDRERIGKAKAEFQAIVNDPLMLNSVILVFANKQDMKGAMTPL 137
Query: 678 EITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQLK 556
E+ + LGL+ L+NR W+IQ +CA GDGLYEGLDWL++ LK
Sbjct: 138 EVCEGLGLYDLKNRIWHIQGSCALKGDGLYEGLDWLASTLK 178
>10_08_1062 +
22626262-22626318,22626404-22626494,22626601-22626716,
22627035-22627094,22627204-22627269,22627726-22627914
Length = 192
Score = 132 bits (318), Expect = 5e-31
Identities = 58/100 (58%), Positives = 73/100 (73%)
Frame = -1
Query: 858 WRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAVLLIFANKQDLPNAMNAA 679
WRHYF NT LI+VVDS DRERIG AR E ++++ + ++VLL+FANKQD+ AM
Sbjct: 78 WRHYFNNTDALIYVVDSLDRERIGRARAEFQAIINDPFMLNSVLLVFANKQDMRGAMTPM 137
Query: 678 EITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQL 559
E+ + LGL+ L NR W+IQ TCA GDGLYEGLDWL+ L
Sbjct: 138 EVCEGLGLYDLNNRIWHIQGTCALKGDGLYEGLDWLATTL 177
>11_06_0218 +
21361975-21362314,21362463-21362545,21363870-21363965,
21364451-21364813
Length = 293
Score = 122 bits (295), Expect = 3e-28
Identities = 51/100 (51%), Positives = 75/100 (75%)
Frame = -1
Query: 858 WRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAVLLIFANKQDLPNAMNAA 679
W Y++ T +I V+DS DR RI ++EL R+L +L AV+L+FANKQDL +AM+ A
Sbjct: 187 WATYYRGTHAVIVVIDSTDRARINIIKDELFRLLQHGDLEGAVVLVFANKQDLKDAMSPA 246
Query: 678 EITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQL 559
EITD L LHS++N +W+IQA+CA +G+GLY+GL W++ ++
Sbjct: 247 EITDALSLHSIKNHDWHIQASCAITGEGLYDGLGWIAQKV 286
>08_01_0921 +
9075409-9075511,9075606-9075689,9075744-9075806,
9077163-9077181,9078227-9078338,9078902-9078949,
9079372-9079502,9079673-9079757,9079776-9079784
Length = 217
Score = 114 bits (275), Expect = 7e-26
Identities = 51/94 (54%), Positives = 70/94 (74%)
Frame = -1
Query: 858 WRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAVLLIFANKQDLPNAMNAA 679
WR YF NTQ +I+VVDS+D +R+ A+EE +L EDEL+ AV+L++ANKQDLP A++ A
Sbjct: 93 WRCYFPNTQAIIYVVDSSDTDRLVTAKEEFHAILEEDELKGAVVLVYANKQDLPGALDDA 152
Query: 678 EITDKLGLHSLRNRNWYIQATCATSGDGLYEGLD 577
IT+ L LH +++R W I T A G+GL+EGLD
Sbjct: 153 AITESLELHKIKSRQWAIFKTSAIKGEGLFEGLD 186
>06_01_0098 +
818374-818427,818537-818627,818753-818868,818962-819087,
819175-819357
Length = 189
Score = 112 bits (269), Expect = 4e-25
Identities = 49/103 (47%), Positives = 74/103 (71%), Gaps = 1/103 (0%)
Frame = -1
Query: 858 WRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAVLLIFANKQDLPNAMNAA 679
WR YF+N LI+VVDS DRERIG A+EE ++ + + ++V+L+ ANKQDL AM+++
Sbjct: 77 WRQYFRNADALIYVVDSMDRERIGVAKEEFQAIIRDPLMLNSVILLLANKQDLKGAMSSS 136
Query: 678 EITDKLGLH-SLRNRNWYIQATCATSGDGLYEGLDWLSNQLKN 553
E+ +LG + L+NR W+ Q A +GDGL+ GLDWL++ L++
Sbjct: 137 EVCQRLGAYEELKNRRWHCQGASALTGDGLHGGLDWLASTLRD 179
>03_03_0224 +
15580944-15581036,15581630-15581770,15582385-15582493,
15582598-15582659,15583704-15583807,15584058-15584160
Length = 203
Score = 81.0 bits (191), Expect = 1e-15
Identities = 39/113 (34%), Positives = 61/113 (53%)
Frame = -1
Query: 858 WRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAVLLIFANKQDLPNAMNAA 679
W Y+Q +I+V+D+ +A+ L ++L ++L+ A LLIFANKQDLP +
Sbjct: 85 WEKYYQEAHAIIYVIDAAAASSFEDAKSALEKVLRHEDLKGAPLLIFANKQDLPGVITDE 144
Query: 678 EITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQLKNANR*PYVRQLA 520
E+ L L L R + QA A G G+ G+DW+ Q++ + R +R A
Sbjct: 145 ELARYLQLKELDERPYKFQAVSAYDGRGIKSGIDWVVEQMERSKRTEVLRARA 197
>07_03_1298 -
25592788-25592890,25593126-25593229,25593747-25593808,
25593957-25594065,25594215-25594355,25594707-25594769,
25594974-25595084,25596140-25596457
Length = 336
Score = 77.8 bits (183), Expect = 1e-14
Identities = 36/105 (34%), Positives = 58/105 (55%)
Frame = -1
Query: 858 WRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAVLLIFANKQDLPNAMNAA 679
W Y++ +I+V+DS +A+ L ++L ++L+ LLIFANKQ+LP A+
Sbjct: 218 WEKYYEEAHAVIYVIDSAAASSFEDAKSALEKVLHHEDLQGVPLLIFANKQELPAAVTEE 277
Query: 678 EITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQLKNANR 544
E+ L L L R + QA A G G+ G+DWL +++ + R
Sbjct: 278 ELARHLHLKGLDERPYMFQAGSAYDGTGIKAGIDWLVEEMERSKR 322
>02_02_0711 -
13180406-13180423,13180483-13180563,13181026-13181188,
13182096-13182206,13182365-13182429
Length = 145
Score = 71.7 bits (168), Expect = 7e-13
Identities = 31/62 (50%), Positives = 44/62 (70%)
Frame = -1
Query: 858 WRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAVLLIFANKQDLPNAMNAA 679
WR+YF+ T GL++VVDS+D R+ + R EL +L E+ L A LL+FANKQD+ A+ +
Sbjct: 77 WRNYFEQTDGLVWVVDSSDIRRLDDCRAELHNLLKEERLAGASLLVFANKQDIQGALKPS 136
Query: 678 EI 673
EI
Sbjct: 137 EI 138
>02_01_0226 +
1476529-1476585,1477207-1477297,1478247-1478362,
1478834-1478893,1479000-1479065,1479847-1480047
Length = 196
Score = 60.9 bits (141), Expect = 1e-09
Identities = 25/53 (47%), Positives = 39/53 (73%)
Frame = -1
Query: 858 WRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAVLLIFANKQDL 700
W+ Y N+ LI+VVDS DRERI +AR+E ++ + + ++++L+FANKQDL
Sbjct: 78 WKMYLSNSDALIYVVDSLDRERIIDARQEFQTIIKDPLMANSIILVFANKQDL 130
>03_02_0046 -
5255513-5255630,5255715-5255876,5256579-5256733,
5256811-5256892,5257790-5257827
Length = 184
Score = 60.5 bits (140), Expect = 2e-09
Identities = 31/104 (29%), Positives = 48/104 (46%)
Frame = -1
Query: 858 WRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAVLLIFANKQDLPNAMNAA 679
W Y + +++VVD+ DRE + A+ EL +LS+ L LL+ NK D P A
Sbjct: 81 WERYCRAVSAIVYVVDAADRENMAIAKSELHDLLSKPSLTGIPLLVIGNKIDKPEAFPKQ 140
Query: 678 EITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQLKNAN 547
TD +GL ++ +R + + +DWL K N
Sbjct: 141 SFTDVMGLKTITDREVACFMISCKNSTNIDSVIDWLVKHSKKKN 184
>01_03_0154 + 13269335-13269463,13269597-13269728,13270704-13271024
Length = 193
Score = 58.0 bits (134), Expect = 9e-09
Identities = 25/68 (36%), Positives = 41/68 (60%)
Frame = -1
Query: 858 WRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAVLLIFANKQDLPNAMNAA 679
W+ Y+ ++++VD+ D+ER E+++EL +LS+D L LI NK D+P A +
Sbjct: 81 WKDYYAKVDAVVYLVDAYDKERFAESKKELDALLSDDSLAAVPFLILGNKIDIPYAASEE 140
Query: 678 EITDKLGL 655
E+ LGL
Sbjct: 141 ELRYHLGL 148
>12_02_0764 - 22973675-22973995,22975626-22975757,22977074-22977202
Length = 193
Score = 57.6 bits (133), Expect = 1e-08
Identities = 24/68 (35%), Positives = 41/68 (60%)
Frame = -1
Query: 858 WRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAVLLIFANKQDLPNAMNAA 679
W+ Y+ ++++VD+ D+ER E+++EL +LS+D L LI NK D+P A +
Sbjct: 81 WKDYYAKVDAVVYLVDAYDKERFSESKKELDALLSDDSLATVPFLILGNKIDIPYAASEE 140
Query: 678 EITDKLGL 655
E+ +GL
Sbjct: 141 ELRYHMGL 148
>02_05_0639 -
30552148-30552265,30552362-30552523,30553177-30553298,
30553515-30553596,30554407-30554699
Length = 258
Score = 55.2 bits (127), Expect = 6e-08
Identities = 28/103 (27%), Positives = 49/103 (47%)
Frame = -1
Query: 858 WRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAVLLIFANKQDLPNAMNAA 679
W Y + +++VVD+ DR+ I A+ EL +L++ L LL+ NK D A++
Sbjct: 155 WERYCRGVSAILYVVDAADRDSIPIAKSELHDLLTKQSLAGIPLLVLGNKIDKSEAVSKQ 214
Query: 678 EITDKLGLHSLRNRNWYIQATCATSGDGLYEGLDWLSNQLKNA 550
+ D+LGL +++R + +DWL + A
Sbjct: 215 ALVDQLGLELIKDREVCCYMISCKDSVNIDVVIDWLIKHSRTA 257
>01_01_1068 -
8413269-8413589,8414011-8414262,8417472-8417603,
8417684-8417812
Length = 277
Score = 48.8 bits (111), Expect = 6e-06
Identities = 23/68 (33%), Positives = 39/68 (57%)
Frame = -1
Query: 858 WRHYFQNTQGLIFVVDSNDRERIGEAREELMRMLSEDELRDAVLLIFANKQDLPNAMNAA 679
W+ ++++VD+ D+ER E+++EL +L++D L LI NK D+P A +
Sbjct: 165 WQCSHGLVDAVVYLVDAADKERFAESKKELDALLADDSLATVPFLILGNKIDIPYAASEE 224
Query: 678 EITDKLGL 655
E+ LGL
Sbjct: 225 ELRYYLGL 232
>06_01_0853 +
6486027-6486158,6486561-6486692,6486974-6486978,
6487948-6488017,6489456-6489776
Length = 219
Score = 46.8 bits (106), Expect = 2e-05
Identities = 24/61 (39%), Positives = 36/61 (59%)
Frame = -1
Query: 828 LIFVVDSNDRERIGEAREELMRMLSEDELRDAVLLIFANKQDLPNAMNAAEITDKLGLHS 649
+++VVD+ DR R E++ EL +LS+D L L+ NK D+P A+ E+ LGL
Sbjct: 117 VVYVVDAADRCRFAESKMELDALLSDDALAGVPFLVLGNKIDIPYAVPEQELCYYLGLTG 176
Query: 648 L 646
L
Sbjct: 177 L 177
>11_01_0455 + 3517281-3519798,3519888-3520261
Length = 963
Score = 30.7 bits (66), Expect = 1.6
Identities = 14/21 (66%), Positives = 14/21 (66%)
Frame = -2
Query: 410 LVTEGAPHSFRTRCNTARCVR 348
L TEGA HSF T CN R VR
Sbjct: 682 LETEGAEHSFITECNALRKVR 702
>01_06_1603 - 38564330-38564341,38564608-38564835
Length = 79
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/48 (27%), Positives = 21/48 (43%)
Frame = -2
Query: 665 NWVCIRCATVTGTSKRHAPLPETDCTRVSTGSPISSRTPTANRMCANS 522
+W+C+ G S APL + C ++TG+ R N +S
Sbjct: 22 HWMCLHVPFTVGASVPFAPLIKPTCVEIATGAFAPERQTICNESSESS 69
>09_04_0237 -
15936630-15937250,15937457-15937534,15938874-15938973,
15940414-15942278
Length = 887
Score = 28.7 bits (61), Expect = 6.3
Identities = 16/71 (22%), Positives = 30/71 (42%)
Frame = -2
Query: 647 CATVTGTSKRHAPLPETDCTRVSTGSPISSRTPTANRMCANSQTNLIIERDYGLRYVNFI 468
CAT G DC++ + + + R A + +++ER G R ++
Sbjct: 564 CATCGGEWSTADDADHRDCSKGPEAAMVK-KLADERRWKACPKCRMLVERTAGCRVMSCR 622
Query: 467 CY*IQCIMCGI 435
C + C +CG+
Sbjct: 623 CRMVFCYLCGL 633
>04_04_1184 +
31558678-31558707,31559485-31559644,31559732-31560394,
31560512-31560956,31561090-31561171,31561319-31561534
Length = 531
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = -2
Query: 653 IRCATVTGTSKRHAPLPETDCTRVSTGSPISSRTPTANRMCANSQT 516
+ +V P+P D +R TG+P+ S TPT + C+ T
Sbjct: 289 VHSVSVRDVGTEMTPIPSQDPSR--TGTPLGSMTPTRSPNCSIPST 332
>04_03_0286 +
13915705-13915984,13916478-13917062,13918188-13918661,
13918963-13920208,13920282-13920297
Length = 866
Score = 28.3 bits (60), Expect = 8.3
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1
Query: 592 QSVSGSGACRLDVPVTVAQRMQTQFV 669
Q +G+G C +DVP+ AQ +Q FV
Sbjct: 171 QDCNGTGCCSIDVPIR-AQTLQLMFV 195
>01_06_0065 + 26107522-26107700,26110875-26111253
Length = 185
Score = 28.3 bits (60), Expect = 8.3
Identities = 19/69 (27%), Positives = 32/69 (46%)
Frame = -1
Query: 801 RERIGEAREELMRMLSEDELRDAVLLIFANKQDLPNAMNAAEITDKLGLHSLRNRNWYIQ 622
R + G+ +R + R VL++F ++ + A E + +G +LR W+
Sbjct: 60 RSKRGDIVLAALRRSARRGTRRFVLMLFRRQRLVAAEKEADEEEEDIGT-ALRRSAWWAT 118
Query: 621 ATCATSGDG 595
T AT GDG
Sbjct: 119 QTQATPGDG 127
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,851,615
Number of Sequences: 37544
Number of extensions: 467926
Number of successful extensions: 1119
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1090
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1116
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2409218220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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