Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_pT_G22
(864 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC10F6.10 |||protein kinase, RIO family |Schizosaccharomyces p... 162 5e-41
SPBC1703.05 |||protein kinase, RIO family|Schizosaccharomyces po... 44 4e-05
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 31 0.21
SPCC297.03 |ssp1||serine/threonine protein kinase Ssp1 |Schizosa... 31 0.28
SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|ch... 30 0.49
SPBC30B4.02c |||R3H and G-patch domain, unknown biological role|... 28 2.0
SPBC23E6.02 |||ATP-dependent DNA helicase |Schizosaccharomyces p... 27 2.6
SPCC4G3.16 |||CMP/dCMP deaminase family|Schizosaccharomyces pomb... 27 2.6
SPAC1687.09 |||conserved fungal protein|Schizosaccharomyces pomb... 27 2.6
SPBC13A2.02 |||nucleoporin Nup82|Schizosaccharomyces pombe|chr 2... 27 3.4
SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr 1||... 27 4.5
SPAC1639.02c |trk2|SPAC1F5.12|potassium ion transporter Trk2|Sch... 27 4.5
SPAC1D4.12 |rad15|rhp3|transcription factor TFIIH complex subuni... 27 4.5
SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces po... 27 4.5
SPAC23A1.06c |cmk2|mkp2|MAPK-activated protein kinase Cmk2|Schiz... 26 6.0
SPBC14C8.14c |pol5||DNA polymerase phi|Schizosaccharomyces pombe... 26 6.0
SPAC17A2.01 |bsu1|SPAC1B1.05, bsu1|high-affinity import carrier ... 26 6.0
SPAC1805.02c |||electron transfer flavoprotein beta subunit |Sch... 26 7.9
SPAC30D11.09 |cwf19||complexed with Cdc5 protein Cwf19 |Schizosa... 26 7.9
>SPAC10F6.10 |||protein kinase, RIO family |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 521
Score = 162 bits (394), Expect = 5e-41
Identities = 82/198 (41%), Positives = 115/198 (58%), Gaps = 1/198 (0%)
Frame = -2
Query: 851 CARAYILRSHVLVMTFMGEG-GWPSPKLKDVEISQSTARSLYRDCITMMWKMYNICKLVH 675
C +L+ HVL+M+F+G+ GW PKLKD++++ A LY+ M ++++C LVH
Sbjct: 228 CPEPILLKQHVLLMSFLGDKKGWAYPKLKDIDMTPGEATKLYQLVARNMRILFHVCHLVH 287
Query: 674 ADLSEYNLLYHKGNAVVIDVSQSVEHDHPHAFEFLRKDCTNISDFFRKRGVATLTVKELF 495
ADLSEYNLLYHKG IDVSQSVEHDHP + +FLR D NIS FFR+ L++ +LF
Sbjct: 288 ADLSEYNLLYHKGKVYFIDVSQSVEHDHPQSIDFLRMDILNISTFFRRLNAGCLSLPQLF 347
Query: 494 DFITDSSINVNNLEECLEKLSDKAASRNFEDMTAQEQVEEEAFKNIYIPKRLTEVINYER 315
FIT+ C ++ + +E+ E+ EEE F Y+P+ L EV + +R
Sbjct: 348 KFITEEG-------SCEKEAMKTRLNAIYEEEPTTEEYEEE-FLKTYVPRTLDEVYDIDR 399
Query: 314 DISKAKKGDTEDLTYKKI 261
D G L YK +
Sbjct: 400 DTEIVNAGGVNSLVYKHL 417
>SPBC1703.05 |||protein kinase, RIO family|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 336
Score = 43.6 bits (98), Expect = 4e-05
Identities = 31/106 (29%), Positives = 47/106 (44%), Gaps = 2/106 (1%)
Frame = -2
Query: 683 LVHADLSEYNLLYHK-GNAVVIDVSQSVEHDHPHAFEFLRKDCTNISDFFRKRGVATLTV 507
L+H D +E+N++ + G AVVID Q V HP A + +D I +F K V
Sbjct: 216 LIHGDFNEFNIIVREDGTAVVIDFPQMVSTSHPDAQFYFDRDVQCIVQYFEKNYQYKGDV 275
Query: 506 KELFDFITDSSINVNNLEECLEKLS-DKAASRNFEDMTAQEQVEEE 372
D NNL+ +E +K S+ E +E+ +E
Sbjct: 276 PNFEDI--SKMEKENNLDIMIEASGFNKKQSKELEKYRQEEEKRKE 319
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 31.1 bits (67), Expect = 0.21
Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Frame = -2
Query: 512 TVKELFDFITDSSINVNNLEECLEKLSDKAASRNFEDMTAQEQVEEEAFKN-IYIPKRLT 336
T +EL + + + S + LEE +K S + N +DM Q QVEE+ +N +L
Sbjct: 1606 TKEELENQLNEKSQRIKELEEQAQKNSSENTHDNIDDMIKQ-QVEEKLKENSANFDVKLK 1664
Query: 335 EVINYERDISKAK 297
+V+ SKAK
Sbjct: 1665 KVVAETEFRSKAK 1677
>SPCC297.03 |ssp1||serine/threonine protein kinase Ssp1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 652
Score = 30.7 bits (66), Expect = 0.28
Identities = 19/66 (28%), Positives = 31/66 (46%)
Frame = -2
Query: 818 LVMTFMGEGGWPSPKLKDVEISQSTARSLYRDCITMMWKMYNICKLVHADLSEYNLLYHK 639
LV+ +M G P +S S AR +RD + + + + ++H D+ NLL +
Sbjct: 219 LVLEYMSGGEVPWTDCDSPVLSISEARQYFRDVVLGL-EYLHYQGIIHRDIKPANLLLNS 277
Query: 638 GNAVVI 621
N V I
Sbjct: 278 SNCVKI 283
>SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 750
Score = 29.9 bits (64), Expect = 0.49
Identities = 14/58 (24%), Positives = 32/58 (55%)
Frame = -2
Query: 440 KLSDKAASRNFEDMTAQEQVEEEAFKNIYIPKRLTEVINYERDISKAKKGDTEDLTYK 267
K ++ +N ED TA+ + +++FKN++ R + N+ R+ S ++ + ++ K
Sbjct: 639 KNENQTLLKNLEDSTARYEHLQKSFKNVFNQLRKQQPSNHGRNSSVSRSSSSVEVNSK 696
>SPBC30B4.02c |||R3H and G-patch domain, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 27.9 bits (59), Expect = 2.0
Identities = 25/103 (24%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
Frame = -2
Query: 506 KELFDFITDSSINVNNLEECL-EKLSDKAASRNFEDMTAQEQVEEEAFKNIYIP----KR 342
KEL+ D S+++ N+ + + +++ A+ AQEQ+ E I K
Sbjct: 190 KELYSKDNDDSLDILNVPNLVNDDIANNNAAPPPPLAQAQEQLSTENEDEFDIDDTTDKM 249
Query: 341 LTEVINYERDISKAKKGDTEDLTYKKIAGFKEDLSGTANRPEI 213
T +N D+S ++ D ++ +++ G KE+ +PEI
Sbjct: 250 TTFTMNKFADLSVLEEDDDDEDEDEELEGEKEEEEEEKEKPEI 292
>SPBC23E6.02 |||ATP-dependent DNA helicase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1040
Score = 27.5 bits (58), Expect = 2.6
Identities = 27/90 (30%), Positives = 48/90 (53%), Gaps = 2/90 (2%)
Frame = -2
Query: 695 NICKLVHADLSEYNLLYHKGNAVVIDVSQSVEHDHPHAFEFLRKDCTNISDFFRKRGVAT 516
N C+ + D ++N+ ++K N D S S D + L+ D I+ +R +A
Sbjct: 13 NPCEQIPLD-DKHNIGFNKNNTP--DYSSSASSD-----QLLKND---INRHEMERRIAF 61
Query: 515 LTVKE-LFD-FITDSSINVNNLEECLEKLS 432
L K+ LF+ F+ DSS ++N +E +EK++
Sbjct: 62 LNRKQALFNAFMHDSSSSLNTMESNIEKVN 91
>SPCC4G3.16 |||CMP/dCMP deaminase family|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 405
Score = 27.5 bits (58), Expect = 2.6
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +1
Query: 649 SKLYSDRSACTNLHILYIFHIIVMQSLYNDLAVDCD 756
SK S + +CT+L + F +V+ SL D+ V C+
Sbjct: 336 SKRLSKKVSCTDLIVKQKFSTVVLGSLEPDIFVKCE 371
>SPAC1687.09 |||conserved fungal protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1379
Score = 27.5 bits (58), Expect = 2.6
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -2
Query: 578 EFLRKDCTNISDFFRKRGVATLTVKELFDFITDSSIN 468
E L+K N FF+K+ +K+ FDF T + +N
Sbjct: 1337 EKLQKKTDNKKPFFKKKKKKRKHLKKFFDFNTTAKVN 1373
>SPBC13A2.02 |||nucleoporin Nup82|Schizosaccharomyces pombe|chr
2|||Manual
Length = 803
Score = 27.1 bits (57), Expect = 3.4
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = -2
Query: 440 KLSDKAASRNFEDMT-AQEQVEEEAFKNIYIPKRLTEVINYERDISKAKKGDTEDLTYKK 264
KLSD+ + NF + + E +E KR+ +V+ D+ D E K+
Sbjct: 666 KLSDRIS--NFREKAWSTEHLEHLTSDMSMCEKRIDQVLQRVMDLRVPDLSDKEKQFIKE 723
Query: 263 IAGFKEDLSG 234
I +KE ++G
Sbjct: 724 IGNYKEKVTG 733
>SPAC19D5.04 |ptr1||HECT domain|Schizosaccharomyces pombe|chr
1|||Manual
Length = 3227
Score = 26.6 bits (56), Expect = 4.5
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = -2
Query: 533 KRGVATLTVKELFDFITDSSINVN-NLEECLEKLSDKAASRNFEDMTAQEQVEEE 372
+ +A +KE D +TD + N N +LEE ++D S E+ Q + +E
Sbjct: 1155 RTSIANGDIKEPLDVVTDDNTNSNFSLEETNASVTDMPESEKHENGIFQAYLLKE 1209
>SPAC1639.02c |trk2|SPAC1F5.12|potassium ion transporter
Trk2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 880
Score = 26.6 bits (56), Expect = 4.5
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +2
Query: 509 QSMLPHHVS*RNLICSYNPSLKT 577
Q+ L HH+ + I S+NPSL+T
Sbjct: 284 QTQLNHHLDNNSSISSHNPSLET 306
>SPAC1D4.12 |rad15|rhp3|transcription factor TFIIH complex subunit
Rad15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 772
Score = 26.6 bits (56), Expect = 4.5
Identities = 18/61 (29%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Frame = -2
Query: 773 LKDVEISQSTARSLYRDCITMMWKMYNI---C-KLVHADLSEYNLLYHKGNAVVIDVSQS 606
L D +I++ +R L +DCI + + +NI C + + DL+E +L K + ++ + Q
Sbjct: 211 LLDPKIAERVSRELSKDCIVVFDEAHNIDNVCIESLSIDLTESSL--RKASKSILSLEQK 268
Query: 605 V 603
V
Sbjct: 269 V 269
>SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 897
Score = 26.6 bits (56), Expect = 4.5
Identities = 15/55 (27%), Positives = 24/55 (43%)
Frame = +1
Query: 655 LYSDRSACTNLHILYIFHIIVMQSLYNDLAVDCDISTSFNLGDGHPPSPMKVITK 819
L S ++ L++ H+I+ + YN D I LG P + + ITK
Sbjct: 797 LVSLKAGSVGLNLTIANHVILQEPFYNPSIEDQAIDRVHRLGQQKPVTVYRFITK 851
>SPAC23A1.06c |cmk2|mkp2|MAPK-activated protein kinase
Cmk2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 504
Score = 26.2 bits (55), Expect = 6.0
Identities = 10/37 (27%), Positives = 21/37 (56%)
Frame = -2
Query: 755 SQSTARSLYRDCITMMWKMYNICKLVHADLSEYNLLY 645
S++ AR + + ++++C +VH D+ NLL+
Sbjct: 160 SENLARHIIIQVAEAVKHLHDVCGIVHRDIKPENLLF 196
>SPBC14C8.14c |pol5||DNA polymerase phi|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 959
Score = 26.2 bits (55), Expect = 6.0
Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Frame = -2
Query: 518 TLTVKELFDFITDS---SINVNNLEECLEKLSDKAASRNFEDMTAQEQVEEEAF 366
+L +++L D + S +N ++ + L K + ++ E M A E+VEE+AF
Sbjct: 631 SLLLRKLVDMLFTSFSEDMNRESIHLICDVLKAKESVKDSEGMFAGEEVEEDAF 684
>SPAC17A2.01 |bsu1|SPAC1B1.05, bsu1|high-affinity import carrier for
pyridoxine, pyridoxal, and pyridoxamine
Bsu1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 526
Score = 26.2 bits (55), Expect = 6.0
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -2
Query: 680 VHADLSEYNLLYHKGNAVVIDVSQSVEHDHP 588
+H SEY+ + + VID+S + DHP
Sbjct: 39 IHETNSEYDEKKREESPEVIDISNLISSDHP 69
>SPAC1805.02c |||electron transfer flavoprotein beta subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 254
Score = 25.8 bits (54), Expect = 7.9
Identities = 10/36 (27%), Positives = 22/36 (61%)
Frame = -3
Query: 193 VEVVTALRMKIEMKNQVQNSRIARVLETSHQTVRNQ 86
+ V A+RMK +KN+++++ + +TS + + Q
Sbjct: 44 IAVEEAIRMKETLKNRIEDTLVVTAGQTSSEPILRQ 79
>SPAC30D11.09 |cwf19||complexed with Cdc5 protein Cwf19
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 639
Score = 25.8 bits (54), Expect = 7.9
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -2
Query: 416 RNFEDMTAQEQVEEEAFKNIYIPKRLTEVINYERDISKAK 297
RNF+D T E V+EE N ++ + Y + I+K K
Sbjct: 329 RNFDDPTIDEMVQEEKLLN--KQRKYGQNYEYAKQIAKDK 366
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,887,096
Number of Sequences: 5004
Number of extensions: 55088
Number of successful extensions: 181
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 176
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 178
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 430470850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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