Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_pT_G22
(864 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF067624-5|AAC17564.4| 506|Caenorhabditis elegans Hypothetical ... 171 5e-43
Z22181-2|CAA80180.1| 510|Caenorhabditis elegans Hypothetical pr... 102 3e-22
AF067624-6|AAP68904.1| 264|Caenorhabditis elegans Hypothetical ... 45 6e-05
AL132877-9|CAC70109.2| 529|Caenorhabditis elegans Hypothetical ... 42 4e-04
Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical pr... 32 0.61
AF040642-2|AAN73874.2| 411|Caenorhabditis elegans Hypothetical ... 31 1.4
AF043693-4|AAB97538.1| 971|Caenorhabditis elegans Hypothetical ... 29 3.2
Z74034-4|CAE17842.2| 319|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z68215-2|CAA92451.2| 452|Caenorhabditis elegans Hypothetical pr... 28 7.5
AC024137-2|AAK09075.1| 1603|Caenorhabditis elegans Vitellogenin ... 28 7.5
AC024137-1|AAK09074.1| 1603|Caenorhabditis elegans Vitellogenin ... 28 7.5
AC006677-3|AAF39952.2| 298|Caenorhabditis elegans Serpentine re... 28 7.5
U10402-10|AAA19064.1| 355|Caenorhabditis elegans Gro-1 operon g... 28 9.9
AY052770-1|AAL14109.1| 355|Caenorhabditis elegans GOP-2 protein. 28 9.9
AF045643-5|AAC02592.1| 607|Caenorhabditis elegans Hypothetical ... 28 9.9
AC024202-6|AAF36035.1| 199|Caenorhabditis elegans Mediator prot... 28 9.9
>AF067624-5|AAC17564.4| 506|Caenorhabditis elegans Hypothetical
protein M01B12.5a protein.
Length = 506
Score = 171 bits (416), Expect = 5e-43
Identities = 85/204 (41%), Positives = 123/204 (60%)
Frame = -2
Query: 845 RAYILRSHVLVMTFMGEGGWPSPKLKDVEISQSTARSLYRDCITMMWKMYNICKLVHADL 666
+ ++L+ HVLVM F+G+ GWP+P LK+ +SQ A +Y + M ++Y CKLVHADL
Sbjct: 227 KPHLLKGHVLVMDFLGKDGWPAPLLKNANLSQEDAEPMYVGLVRDMRRLYRECKLVHADL 286
Query: 665 SEYNLLYHKGNAVVIDVSQSVEHDHPHAFEFLRKDCTNISDFFRKRGVATLTVKELFDFI 486
SE+N+L H G +IDVSQSVE DHPHA EFLR DC N++ FFR+ GV L+V+ LF+ I
Sbjct: 287 SEFNMLVHDGKLWIIDVSQSVEQDHPHALEFLRMDCNNVNKFFRELGVPVLSVRRLFEVI 346
Query: 485 TDSSINVNNLEECLEKLSDKAASRNFEDMTAQEQVEEEAFKNIYIPKRLTEVINYERDIS 306
D ++ +E +E E+ ++ F N +IP +L V+++ERD
Sbjct: 347 VDPLMSSKEMETIIE-----------EERVLVNSEDDSLFMNAFIPHKLEHVLHFERDGK 395
Query: 305 KAKKGDTEDLTYKKIAGFKEDLSG 234
AK+G + ++ I K DL G
Sbjct: 396 LAKEGVEANNPFQNIVS-KIDLKG 418
>Z22181-2|CAA80180.1| 510|Caenorhabditis elegans Hypothetical
protein ZK632.3 protein.
Length = 510
Score = 102 bits (245), Expect = 3e-22
Identities = 60/151 (39%), Positives = 92/151 (60%), Gaps = 6/151 (3%)
Frame = -2
Query: 851 CARAYILRSHVLVMTFMGEGGWPSPKLKDVE---ISQSTARSLYRDCITMMWKMYNICKL 681
C + +R +VLVM+F+G+ G +P+LK+VE + R++Y ++M +MY C L
Sbjct: 325 CPQPVKVRRNVLVMSFLGDQGLAAPRLKNVEWEFFTDDERRNVYDQVQSIMCRMYKECLL 384
Query: 680 VHADLSEYNLLYHKGNAV-VIDVSQSVEHDHPHAFEFLRKDCTNISDFFRKRGVATL-TV 507
VHADLSE+NLL N V VIDVSQ+++ HP + +FL +D NI FF + G L T
Sbjct: 385 VHADLSEFNLLLTPDNKVHVIDVSQAMDLSHPRSLQFLTRDIQNIITFFTRIGTPNLPTY 444
Query: 506 KELFDFITD-SSINVNNLEECLEKLSDKAAS 417
+LF+ ITD + ++L +E+ S++ S
Sbjct: 445 VQLFNLITDLDMVEDHDLLVQVEQFSEENRS 475
>AF067624-6|AAP68904.1| 264|Caenorhabditis elegans Hypothetical
protein M01B12.5b protein.
Length = 264
Score = 45.2 bits (102), Expect = 6e-05
Identities = 16/36 (44%), Positives = 26/36 (72%)
Frame = -2
Query: 845 RAYILRSHVLVMTFMGEGGWPSPKLKDVEISQSTAR 738
+ ++L+ HVLVM F+G+ GWP+P LK+ +SQ +
Sbjct: 227 KPHLLKGHVLVMDFLGKDGWPAPLLKNANLSQENVK 262
>AL132877-9|CAC70109.2| 529|Caenorhabditis elegans Hypothetical
protein Y105E8B.3 protein.
Length = 529
Score = 42.3 bits (95), Expect = 4e-04
Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Frame = -2
Query: 743 ARSLYRDCITMMWKMYNICKLVHADLSEYNLLYHKGNAVV-IDVSQSVEHDHPHAFEFLR 567
A +LY + ++ KM ++H D +E+NL+ + +V ID Q V DHP+A +
Sbjct: 205 AGALYDRLMALIVKMARH-GVIHGDFNEFNLIMLEDERIVMIDFPQMVSIDHPNAEYYFD 263
Query: 566 KDCTNISDFFRKR 528
+D T + FF+++
Sbjct: 264 RDVTCVRTFFKRK 276
>Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical
protein R05H10.2 protein.
Length = 608
Score = 31.9 bits (69), Expect = 0.61
Identities = 25/102 (24%), Positives = 41/102 (40%), Gaps = 1/102 (0%)
Frame = -2
Query: 596 DHPHAFEFLRKDCTNISDFFRK-RGVATLTVKELFDFITDSSINVNNLEECLEKLSDKAA 420
+H HA E L+K N F + R + +V+ L + NV N EK+S++
Sbjct: 471 EHMHALECLKKLNNNAETFHKDHRPIVEFSVENLLALQARARRNVKNTT---EKMSERVV 527
Query: 419 SRNFEDMTAQEQVEEEAFKNIYIPKRLTEVINYERDISKAKK 294
+ Q E ++PK + I + +AKK
Sbjct: 528 NEKIRQQVKQSIGEVHTAGMKFLPKFTGKKIRHRNLSGRAKK 569
>AF040642-2|AAN73874.2| 411|Caenorhabditis elegans Hypothetical
protein C50D2.9 protein.
Length = 411
Score = 30.7 bits (66), Expect = 1.4
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = -2
Query: 452 ECLEKLSDKAASRNFEDMTAQEQVEEEAFKNIYIPKRLTEV-INYERDISKAKKGDTEDL 276
+ +++L+ AA + +A EQV + AF+N+ I + + V NY + +KKGD
Sbjct: 288 QVMKRLAVSAAFHTRQMESAVEQVAK-AFQNVEIHRPVCNVWSNYSGKVMSSKKGDVRGA 346
Query: 275 TYKKI 261
K+I
Sbjct: 347 VAKQI 351
>AF043693-4|AAB97538.1| 971|Caenorhabditis elegans Hypothetical
protein C34B2.6 protein.
Length = 971
Score = 29.5 bits (63), Expect = 3.2
Identities = 22/81 (27%), Positives = 38/81 (46%)
Frame = -2
Query: 611 QSVEHDHPHAFEFLRKDCTNISDFFRKRGVATLTVKELFDFITDSSINVNNLEECLEKLS 432
+ VE H H LRKD + ++ + + ++EL S V NL++ +E++
Sbjct: 655 EKVEIAHQHLIPQLRKDTSLATEQLK---IEDSALEELIKHYCRES-GVRNLQQHIERIF 710
Query: 431 DKAASRNFEDMTAQEQVEEEA 369
KAA + E E+ E+A
Sbjct: 711 RKAALQIAEQQNEDEEPAEKA 731
>Z74034-4|CAE17842.2| 319|Caenorhabditis elegans Hypothetical
protein F43A11.3 protein.
Length = 319
Score = 28.3 bits (60), Expect = 7.5
Identities = 12/41 (29%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Frame = +1
Query: 634 FPLWYSKLYSDRSACTNLHILYIFHI-IVMQSLYNDLAVDC 753
FP +YSK+++ + + + + Y++ + IV+ D+A DC
Sbjct: 121 FPQFYSKIFAIKPSLIVICLFYVYRLTIVIYMTAKDVARDC 161
>Z68215-2|CAA92451.2| 452|Caenorhabditis elegans Hypothetical
protein C53B4.2 protein.
Length = 452
Score = 28.3 bits (60), Expect = 7.5
Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = -2
Query: 500 LFDFITDSSINVNNLEECLEKLSD-KAASRNFEDMTAQEQVEEEAFKNIYIPKRLTEVIN 324
+F S INV +EKL K++S+N +D +E+ + N+ + + ++ + +
Sbjct: 350 VFSNTVRSLINVQG--PAMEKLQPIKSSSKNEDDEGEREEATQLEGNNVTMAENISRIFS 407
Query: 323 YER 315
YER
Sbjct: 408 YER 410
>AC024137-2|AAK09075.1| 1603|Caenorhabditis elegans Vitellogenin
structural genes (yolk protein genes) protein 3 protein.
Length = 1603
Score = 28.3 bits (60), Expect = 7.5
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = -2
Query: 497 FDFITDSSINVNNLEE-CLEKLSDKAASRNFEDMTAQEQVEEEAFKNIYIPK 345
++F T S V N + + +LS + SR + +MT Q +E KN+ IP+
Sbjct: 1234 YNFWTVSEKRVQNEDRRVVLQLSVEPLSRQYMNMTIQTPEQEVELKNVRIPR 1285
>AC024137-1|AAK09074.1| 1603|Caenorhabditis elegans Vitellogenin
structural genes (yolk protein genes) protein 4 protein.
Length = 1603
Score = 28.3 bits (60), Expect = 7.5
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = -2
Query: 497 FDFITDSSINVNNLEE-CLEKLSDKAASRNFEDMTAQEQVEEEAFKNIYIPK 345
++F T S V N + + +LS + SR + +MT Q +E KN+ IP+
Sbjct: 1234 YNFWTVSEKRVQNEDRRVVLQLSVEPLSRQYMNMTIQTPEQEVELKNVRIPR 1285
>AC006677-3|AAF39952.2| 298|Caenorhabditis elegans Serpentine
receptor, class x protein28 protein.
Length = 298
Score = 28.3 bits (60), Expect = 7.5
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +1
Query: 637 PLWYSKLYSDRSACTNLHILYIFHIIVMQSLY 732
PLWY+ ++S+ + ++IF II +LY
Sbjct: 108 PLWYTHIFSNSKTVFYRNFIWIFSIIFCITLY 139
>U10402-10|AAA19064.1| 355|Caenorhabditis elegans Gro-1 operon gene
protein 2 protein.
Length = 355
Score = 27.9 bits (59), Expect = 9.9
Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Frame = -2
Query: 425 AASRNFEDMTAQEQVEEEAFKNIYIPKRLTEVINYER---DISKAKKGDTEDLTYKKIAG 255
A FED+ EA+K Y+P + E + E+ D + KK D E L K +
Sbjct: 258 ATGEGFEDVMTAIDESVEAYKKEYVP--MYEKVLAEKKLLDEEERKKRDEETLKGKAV-- 313
Query: 254 FKEDLSGTANRPEIL 210
DL+ AN E L
Sbjct: 314 --HDLNKVANPDEFL 326
>AY052770-1|AAL14109.1| 355|Caenorhabditis elegans GOP-2 protein.
Length = 355
Score = 27.9 bits (59), Expect = 9.9
Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 3/75 (4%)
Frame = -2
Query: 425 AASRNFEDMTAQEQVEEEAFKNIYIPKRLTEVINYER---DISKAKKGDTEDLTYKKIAG 255
A FED+ EA+K Y+P + E + E+ D + KK D E L K +
Sbjct: 258 ATGEGFEDVMTAIDESVEAYKKEYVP--MYEKVLAEKKLLDEEERKKRDEETLKGKAV-- 313
Query: 254 FKEDLSGTANRPEIL 210
DL+ AN E L
Sbjct: 314 --HDLNKVANPDEFL 326
>AF045643-5|AAC02592.1| 607|Caenorhabditis elegans Hypothetical
protein F58H7.1 protein.
Length = 607
Score = 27.9 bits (59), Expect = 9.9
Identities = 18/43 (41%), Positives = 22/43 (51%)
Frame = +2
Query: 656 CTQIDQHVPIYIYYTFSTSLLCSLYIMTWLLTVIFPHLLI*AT 784
C + QH P I STS SL++ LL V+ HLL AT
Sbjct: 567 CLNVTQHFPPLI----STSYRPSLFVCVSLLAVLSRHLLYYAT 605
>AC024202-6|AAF36035.1| 199|Caenorhabditis elegans Mediator protein
19 protein.
Length = 199
Score = 27.9 bits (59), Expect = 9.9
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = -1
Query: 87 KKESDKGRKGGKEEI*NEETRKKA 16
KK+ DK RK KEE+ + E RK+A
Sbjct: 169 KKKKDKKRKKEKEELGDAEKRKRA 192
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,807,922
Number of Sequences: 27780
Number of extensions: 299587
Number of successful extensions: 916
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 885
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 912
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2160943708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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