Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_pT_G22
         (864 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    23   3.6  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    22   8.4  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    22   8.4  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    22   8.4  

>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -2

Query: 758 ISQSTARSLYRDCITMMWKMYNICK 684
           I  S+  S Y  CI M++  YNI K
Sbjct: 344 IIYSSLSSFYIPCIIMVFLYYNIFK 368


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = -3

Query: 688 VNWYMLIYLSTTC 650
           + W +L+YL  TC
Sbjct: 2   IRWLLLMYLGITC 14


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +1

Query: 691 ILYIFHIIVMQSLYNDLAVDCDISTSFNLGD 783
           +L IF+  +M S+      +CD   + NLG+
Sbjct: 22  VLLIFYGSIMFSMTQVNKEECDYYQNLNLGE 52


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -3

Query: 706 GKCIIYVNWYMLIYLST 656
           G+ I   NW M++YL T
Sbjct: 308 GQMIYMDNWKMMMYLGT 324


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,317
Number of Sequences: 438
Number of extensions: 3980
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27916710
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)