Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_pT_G18
         (912 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       24   1.7  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    23   3.9  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    23   3.9  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    22   8.9  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    22   8.9  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    22   8.9  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   8.9  

>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 24.2 bits (50), Expect = 1.7
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = -1

Query: 207 RAEGFFGVQNDNKLKXLLKPFIKRGRETIPD 115
           RA  FF  + D  L+  L   +K+  +++PD
Sbjct: 550 RATSFFDPEEDAPLRGDLVRILKQANQSVPD 580


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 23.0 bits (47), Expect = 3.9
 Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = +3

Query: 672 RSYKLVTCESYVPIYQFL-AIKNQIYTAHDIITTK 773
           R  +L  CE   P+Y++L  I+N I +  ++I  K
Sbjct: 308 RELQLPGCEVLCPLYKYLQLIENVIPSNEELICDK 342


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 23.0 bits (47), Expect = 3.9
 Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = +3

Query: 672 RSYKLVTCESYVPIYQFL-AIKNQIYTAHDIITTK 773
           R  +L  CE   P+Y++L  I+N I +  ++I  K
Sbjct: 323 RELQLPGCEVLCPLYKYLQLIENVIPSNEELICDK 357


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = +3

Query: 735 NQIYTAHDIIT 767
           NQ+YTA D++T
Sbjct: 441 NQLYTAFDVLT 451


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -2

Query: 617 KVYNSTCPTPLRDLTKIV 564
           ++Y + CP P  D+T +V
Sbjct: 208 EIYYNCCPEPYIDITFVV 225


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = +3

Query: 735 NQIYTAHDIIT 767
           NQ+YTA D++T
Sbjct: 441 NQLYTAFDVLT 451


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = -2

Query: 911 RPVRKCYFC 885
           +P+ KCYFC
Sbjct: 422 KPLDKCYFC 430


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 242,217
Number of Sequences: 438
Number of extensions: 5473
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29630055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)