Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_pT_G15
(820 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone este... 40 3e-05
AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein. 40 3e-05
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.28
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.28
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.28
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.28
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.28
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 27 0.28
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 27 0.28
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 27 0.28
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 25 0.84
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot... 25 1.1
DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor pro... 24 1.5
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 23 3.4
>AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone
esterase protein.
Length = 567
Score = 39.9 bits (89), Expect = 3e-05
Identities = 36/167 (21%), Positives = 67/167 (40%), Gaps = 4/167 (2%)
Frame = -3
Query: 785 EDTRAQYLQXISDYYFLYHVNKTVRLHSQYSHEYPIYYYLLTYAGEWCVPESLN-FFNSL 609
E T + SD +F+ K R+ ++ + + P+++Y TY G + E ++ N
Sbjct: 402 ETTLKHLIDVASDRFFITDGEKAARMQAKVNRQ-PVWFYYYTYKGAHSISEIMSGTSNKY 460
Query: 608 GHCAEIPFVFGIKVPGKLNEAVCKGSRDSIKTRSRVVKMWTNFAKYGNPTPASDDPLLQI 429
G C + P + + + IK + ++ W +F G P S +
Sbjct: 461 GVCHADDAYMVVDTPFLASTT----TTNDIKMQKVLIDFWVSFVNNGVPNVNS------V 510
Query: 428 TWDPVQSSEK-LNYLSIG--SELTKGRNPFLERMQFWDQLYENHTFL 297
W + +EK L+YL I ++ + R FW+ + N L
Sbjct: 511 QWPRLNPNEKSLHYLHIAGPGKIQMDSSTNFGREDFWNSINFNENKL 557
>AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein.
Length = 567
Score = 39.9 bits (89), Expect = 3e-05
Identities = 36/167 (21%), Positives = 67/167 (40%), Gaps = 4/167 (2%)
Frame = -3
Query: 785 EDTRAQYLQXISDYYFLYHVNKTVRLHSQYSHEYPIYYYLLTYAGEWCVPESLN-FFNSL 609
E T + SD +F+ K R+ ++ + + P+++Y TY G + E ++ N
Sbjct: 402 ETTLKHLIDVASDRFFITDGEKAARMQAKVNRQ-PVWFYYYTYKGAHSISEIMSGTSNKY 460
Query: 608 GHCAEIPFVFGIKVPGKLNEAVCKGSRDSIKTRSRVVKMWTNFAKYGNPTPASDDPLLQI 429
G C + P + + + IK + ++ W +F G P S +
Sbjct: 461 GVCHADDAYMVVDTPFLASTT----TTNDIKMQKVLIDFWVSFVNNGVPNVNS------V 510
Query: 428 TWDPVQSSEK-LNYLSIG--SELTKGRNPFLERMQFWDQLYENHTFL 297
W + +EK L+YL I ++ + R FW+ + N L
Sbjct: 511 QWPRLNPNEKSLHYLHIAGPGKIQMDSSTNFGREDFWNSINFNENKL 557
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 26.6 bits (56), Expect = 0.28
Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Frame = -1
Query: 142 LPGVQNTASK---PEPLASLIVHLTVLTDVFVASRSLFYFFHIILP 14
+PG +NT + PEP ++ V + + R+L+YFF++I+P
Sbjct: 165 MPGKKNTITYQCCPEP------YVDVTFTIQIRRRTLYYFFNLIVP 204
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 26.6 bits (56), Expect = 0.28
Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Frame = -1
Query: 142 LPGVQNTASK---PEPLASLIVHLTVLTDVFVASRSLFYFFHIILP 14
+PG +NT + PEP ++ V + + R+L+YFF++I+P
Sbjct: 165 MPGKKNTITYQCCPEP------YVDVTFTIQIRRRTLYYFFNLIVP 204
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 26.6 bits (56), Expect = 0.28
Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Frame = -1
Query: 142 LPGVQNTASK---PEPLASLIVHLTVLTDVFVASRSLFYFFHIILP 14
+PG +NT + PEP ++ V + + R+L+YFF++I+P
Sbjct: 165 MPGKKNTITYQCCPEP------YVDVTFTIQIRRRTLYYFFNLIVP 204
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 26.6 bits (56), Expect = 0.28
Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Frame = -1
Query: 142 LPGVQNTASK---PEPLASLIVHLTVLTDVFVASRSLFYFFHIILP 14
+PG +NT + PEP ++ V + + R+L+YFF++I+P
Sbjct: 165 MPGKKNTITYQCCPEP------YVDVTFTIQIRRRTLYYFFNLIVP 204
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 26.6 bits (56), Expect = 0.28
Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Frame = -1
Query: 142 LPGVQNTASK---PEPLASLIVHLTVLTDVFVASRSLFYFFHIILP 14
+PG +NT + PEP ++ V + + R+L+YFF++I+P
Sbjct: 165 MPGKKNTITYQCCPEP------YVDVTFTIQIRRRTLYYFFNLIVP 204
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 26.6 bits (56), Expect = 0.28
Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Frame = -1
Query: 142 LPGVQNTASK---PEPLASLIVHLTVLTDVFVASRSLFYFFHIILP 14
+PG +NT + PEP ++ V + + R+L+YFF++I+P
Sbjct: 165 MPGKKNTITYQCCPEP------YVDVTFTIQIRRRTLYYFFNLIVP 204
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 26.6 bits (56), Expect = 0.28
Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Frame = -1
Query: 142 LPGVQNTASK---PEPLASLIVHLTVLTDVFVASRSLFYFFHIILP 14
+PG +NT + PEP ++ V + + R+L+YFF++I+P
Sbjct: 233 MPGKKNTITYQCCPEP------YVDVTFTIQIRRRTLYYFFNLIVP 272
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 26.6 bits (56), Expect = 0.28
Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Frame = -1
Query: 142 LPGVQNTASK---PEPLASLIVHLTVLTDVFVASRSLFYFFHIILP 14
+PG +NT + PEP ++ V + + R+L+YFF++I+P
Sbjct: 233 MPGKKNTITYQCCPEP------YVDVTFTIQIRRRTLYYFFNLIVP 272
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 25.0 bits (52), Expect = 0.84
Identities = 8/17 (47%), Positives = 14/17 (82%)
Frame = -1
Query: 64 VFVASRSLFYFFHIILP 14
V + R+L+YFF++I+P
Sbjct: 225 VIIRRRTLYYFFNLIVP 241
>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
protein.
Length = 1010
Score = 24.6 bits (51), Expect = 1.1
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = -3
Query: 746 YYFLYHVNKTVRLHSQYSHEYPIYYY 669
+Y LY K + L+ QY P+Y Y
Sbjct: 434 FYQLY--KKVMNLYQQYQQSLPVYQY 457
>DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor
protein.
Length = 405
Score = 24.2 bits (50), Expect = 1.5
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = +1
Query: 115 CSPCFELRVRKDQGRRKLP 171
C CF+ R D RKLP
Sbjct: 375 CRKCFKSRTNLDPSNRKLP 393
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 23.0 bits (47), Expect = 3.4
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -3
Query: 317 YENHTFLRAQVYFNDLGVSW*LQQTLG 237
Y N TF+R + F+ L VS+ LQ+ G
Sbjct: 219 YRNLTFVRREGEFSVLQVSFNLQRHTG 245
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 233,065
Number of Sequences: 438
Number of extensions: 5870
Number of successful extensions: 27
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26096055
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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