Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_pT_G13
         (838 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81520-1|CAB04223.1|  399|Caenorhabditis elegans Hypothetical pr...    31   1.3  
Z71259-7|CAA95793.1|  423|Caenorhabditis elegans Hypothetical pr...    29   4.1  
U59210-1|AAB09669.1|  423|Caenorhabditis elegans EAT-5 protein.        29   4.1  
Z75531-5|CAA99800.1|  384|Caenorhabditis elegans Hypothetical pr...    28   7.2  

>Z81520-1|CAB04223.1|  399|Caenorhabditis elegans Hypothetical
           protein F31B9.1 protein.
          Length = 399

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 16/55 (29%), Positives = 27/55 (49%)
 Frame = -1

Query: 376 CLQNLYYIFIVVVFIRKWFSNLYNDYFILFYILMSHSLFSKTKQYLIYSIKIVHL 212
           C   LY+I   +VF+    + +  + FI+F ILM   L S +    + ++ I  L
Sbjct: 53  CHPKLYFIVFGLVFMIIICAGVIGNIFIVFVILMDRKLMSSSVNQFLLNLAIADL 107


>Z71259-7|CAA95793.1|  423|Caenorhabditis elegans Hypothetical
           protein F13G3.8 protein.
          Length = 423

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 12/49 (24%), Positives = 25/49 (51%)
 Frame = -1

Query: 385 TLFCLQNLYYIFIVVVFIRKWFSNLYNDYFILFYILMSHSLFSKTKQYL 239
           TL       ++F+ + F+  +F  L++  F+ + +  SH L    +Q+L
Sbjct: 269 TLNMFNEKIFLFLYIWFLLVFFVTLFDSIFLCYNMFSSHKLVEFLQQFL 317


>U59210-1|AAB09669.1|  423|Caenorhabditis elegans EAT-5 protein.
          Length = 423

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 12/49 (24%), Positives = 25/49 (51%)
 Frame = -1

Query: 385 TLFCLQNLYYIFIVVVFIRKWFSNLYNDYFILFYILMSHSLFSKTKQYL 239
           TL       ++F+ + F+  +F  L++  F+ + +  SH L    +Q+L
Sbjct: 269 TLNMFNEKIFLFLYIWFLLVFFVTLFDSIFLCYNMFSSHKLVEFLQQFL 317


>Z75531-5|CAA99800.1|  384|Caenorhabditis elegans Hypothetical
           protein C54D10.5 protein.
          Length = 384

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 15/52 (28%), Positives = 25/52 (48%)
 Frame = -1

Query: 391 YFTLFCLQNLYYIFIVVVFIRKWFSNLYNDYFILFYILMSHSLFSKTKQYLI 236
           Y  +  L +LYY++IV  ++    + L   Y ++F  L      SK K  L+
Sbjct: 97  YLKIESLFSLYYVYIVPAYVMARITQLAIPYMLIFATLERLFWTSKNKSNLL 148


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,671,499
Number of Sequences: 27780
Number of extensions: 294970
Number of successful extensions: 649
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 630
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 649
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2066533546
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)