Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_pT_G13
         (838 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          22   8.1  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          22   8.1  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   8.1  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      22   8.1  
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          22   8.1  

>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +2

Query: 434 FNKLYQKLESYRLKY 478
           F  LYQK+ SY L+Y
Sbjct: 420 FYMLYQKILSYFLRY 434


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 12/45 (26%), Positives = 20/45 (44%)
 Frame = +2

Query: 434 FNKLYQKLESYRLKYYRRIFFLNFQNLNYNIKAVRDSDKDKDITY 568
           F  +Y+ +  Y  KY   +     + LN+   ++     DK ITY
Sbjct: 417 FFSIYKTILDYYHKYKENLPKYTTEELNFPGVSIESVTVDKLITY 461


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -3

Query: 152 NELYNLNSTLVYFIK 108
           N  YNL + L+YFI+
Sbjct: 211 NHDYNLENKLIYFIE 225


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 12/45 (26%), Positives = 20/45 (44%)
 Frame = +2

Query: 434 FNKLYQKLESYRLKYYRRIFFLNFQNLNYNIKAVRDSDKDKDITY 568
           F  +Y+ +  Y  KY   +     + LN+   ++     DK ITY
Sbjct: 417 FFSIYKTILDYYHKYKENLPKYTTEELNFPGVSIESVTVDKLITY 461


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 12/45 (26%), Positives = 20/45 (44%)
 Frame = +2

Query: 434 FNKLYQKLESYRLKYYRRIFFLNFQNLNYNIKAVRDSDKDKDITY 568
           F  +Y+ +  Y  KY   +     + LN+   ++     DK ITY
Sbjct: 43  FFSIYKTILDYYHKYKENLPKYTTEELNFPGVSIESVTVDKLITY 87


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 203,522
Number of Sequences: 438
Number of extensions: 4873
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26824317
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)