Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_pT_G10
(751 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC002849-1|AAH02849.1| 177|Homo sapiens coatomer protein comple... 219 9e-57
AF151878-1|AAD34115.1| 177|Homo sapiens CGI-120 protein protein. 219 9e-57
AF086911-1|AAP97141.1| 177|Homo sapiens z-cop protein. 219 9e-57
AB047848-1|BAB17659.1| 177|Homo sapiens zeta1-COP protein. 219 9e-57
AK223188-1|BAD96908.1| 177|Homo sapiens coatomer protein comple... 217 4e-56
BC015924-1|AAH15924.1| 210|Homo sapiens coatomer protein comple... 186 1e-46
AB047849-1|BAB17660.1| 210|Homo sapiens zeta2-COP protein. 186 1e-46
AB037938-1|BAA90670.1| 210|Homo sapiens nonclathrin coat protei... 186 1e-46
CR457100-1|CAG33381.1| 144|Homo sapiens AP4S1 protein. 38 0.051
AF155159-1|AAD43329.1| 144|Homo sapiens adaptor-related protein... 38 0.051
AB030654-1|BAA82970.1| 144|Homo sapiens AP-4 clathrin adaptor-r... 38 0.051
AF393369-1|AAL09586.1| 154|Homo sapiens sigma 1C adaptin protein. 31 4.4
>BC002849-1|AAH02849.1| 177|Homo sapiens coatomer protein complex,
subunit zeta 1 protein.
Length = 177
Score = 219 bits (535), Expect = 9e-57
Identities = 103/177 (58%), Positives = 139/177 (78%)
Frame = -1
Query: 595 MEGSLFEPTLYIVKGMCILDYEGNRILAKYYDKDVLPTTKEQKAFEKNLFNKTHRANAEI 416
ME + EP+LY VK + ILD +G+R+ AKYYD D P+ KEQKAFEKN+FNKTHR ++EI
Sbjct: 1 MEALILEPSLYTVKAILILDNDGDRLFAKYYD-DTYPSVKEQKAFEKNIFNKTHRTDSEI 59
Query: 415 IMLDGLTCVYKSNVDLFFYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLD 236
+L+GLT VYKS++DL+FYV+GSS+ENEL+L +VLN L++S+S +LR+N+E+R L+EN++
Sbjct: 60 ALLEGLTVVYKSSIDLYFYVIGSSYENELMLMAVLNCLFDSLSQMLRKNVEKRALLENME 119
Query: 235 AVMLAFDEICDGGVILDAXPTXSVSRAALRTEDVPLGEQTVAQGLQAXKGATEMGLI 65
+ LA DEI DGGVIL++ P V R ALR EDVPL EQTV+Q LQ+ K + L+
Sbjct: 120 GLFLAVDEIVDGGVILESDPQQVVHRVALRGEDVPLTEQTVSQVLQSAKEQIKWSLL 176
>AF151878-1|AAD34115.1| 177|Homo sapiens CGI-120 protein protein.
Length = 177
Score = 219 bits (535), Expect = 9e-57
Identities = 103/177 (58%), Positives = 139/177 (78%)
Frame = -1
Query: 595 MEGSLFEPTLYIVKGMCILDYEGNRILAKYYDKDVLPTTKEQKAFEKNLFNKTHRANAEI 416
ME + EP+LY VK + ILD +G+R+ AKYYD D P+ KEQKAFEKN+FNKTHR ++EI
Sbjct: 1 MEALILEPSLYTVKAILILDNDGDRLFAKYYD-DTYPSVKEQKAFEKNIFNKTHRTDSEI 59
Query: 415 IMLDGLTCVYKSNVDLFFYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLD 236
+L+GLT VYKS++DL+FYV+GSS+ENEL+L +VLN L++S+S +LR+N+E+R L+EN++
Sbjct: 60 ALLEGLTVVYKSSIDLYFYVIGSSYENELMLMAVLNCLFDSLSQMLRKNVEKRALLENME 119
Query: 235 AVMLAFDEICDGGVILDAXPTXSVSRAALRTEDVPLGEQTVAQGLQAXKGATEMGLI 65
+ LA DEI DGGVIL++ P V R ALR EDVPL EQTV+Q LQ+ K + L+
Sbjct: 120 GLFLAVDEIVDGGVILESDPQQVVHRVALRGEDVPLTEQTVSQVLQSAKEQIKWSLL 176
>AF086911-1|AAP97141.1| 177|Homo sapiens z-cop protein.
Length = 177
Score = 219 bits (535), Expect = 9e-57
Identities = 103/177 (58%), Positives = 139/177 (78%)
Frame = -1
Query: 595 MEGSLFEPTLYIVKGMCILDYEGNRILAKYYDKDVLPTTKEQKAFEKNLFNKTHRANAEI 416
ME + EP+LY VK + ILD +G+R+ AKYYD D P+ KEQKAFEKN+FNKTHR ++EI
Sbjct: 1 MEALILEPSLYTVKAILILDNDGDRLFAKYYD-DTYPSVKEQKAFEKNIFNKTHRTDSEI 59
Query: 415 IMLDGLTCVYKSNVDLFFYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLD 236
+L+GLT VYKS++DL+FYV+GSS+ENEL+L +VLN L++S+S +LR+N+E+R L+EN++
Sbjct: 60 ALLEGLTVVYKSSIDLYFYVIGSSYENELMLMAVLNCLFDSLSQMLRKNVEKRALLENME 119
Query: 235 AVMLAFDEICDGGVILDAXPTXSVSRAALRTEDVPLGEQTVAQGLQAXKGATEMGLI 65
+ LA DEI DGGVIL++ P V R ALR EDVPL EQTV+Q LQ+ K + L+
Sbjct: 120 GLFLAVDEIVDGGVILESDPQQVVHRVALRGEDVPLTEQTVSQVLQSAKEQIKWSLL 176
>AB047848-1|BAB17659.1| 177|Homo sapiens zeta1-COP protein.
Length = 177
Score = 219 bits (535), Expect = 9e-57
Identities = 103/177 (58%), Positives = 139/177 (78%)
Frame = -1
Query: 595 MEGSLFEPTLYIVKGMCILDYEGNRILAKYYDKDVLPTTKEQKAFEKNLFNKTHRANAEI 416
ME + EP+LY VK + ILD +G+R+ AKYYD D P+ KEQKAFEKN+FNKTHR ++EI
Sbjct: 1 MEALILEPSLYTVKAILILDNDGDRLFAKYYD-DTYPSVKEQKAFEKNIFNKTHRTDSEI 59
Query: 415 IMLDGLTCVYKSNVDLFFYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLD 236
+L+GLT VYKS++DL+FYV+GSS+ENEL+L +VLN L++S+S +LR+N+E+R L+EN++
Sbjct: 60 ALLEGLTVVYKSSIDLYFYVIGSSYENELMLMAVLNCLFDSLSQMLRKNVEKRALLENME 119
Query: 235 AVMLAFDEICDGGVILDAXPTXSVSRAALRTEDVPLGEQTVAQGLQAXKGATEMGLI 65
+ LA DEI DGGVIL++ P V R ALR EDVPL EQTV+Q LQ+ K + L+
Sbjct: 120 GLFLAVDEIVDGGVILESDPQQVVHRVALRGEDVPLTEQTVSQVLQSAKEQIKWSLL 176
>AK223188-1|BAD96908.1| 177|Homo sapiens coatomer protein complex,
subunit zeta 1 variant protein.
Length = 177
Score = 217 bits (530), Expect = 4e-56
Identities = 102/177 (57%), Positives = 138/177 (77%)
Frame = -1
Query: 595 MEGSLFEPTLYIVKGMCILDYEGNRILAKYYDKDVLPTTKEQKAFEKNLFNKTHRANAEI 416
ME + EP+LY VK + ILD +G+R+ AKYYD D P+ KEQKAFEKN+FNKTHR ++EI
Sbjct: 1 MEALILEPSLYTVKAILILDNDGDRLFAKYYD-DTYPSVKEQKAFEKNIFNKTHRTDSEI 59
Query: 415 IMLDGLTCVYKSNVDLFFYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLD 236
+L+GLT VYKS++DL+FYV+GSS+ENEL+L +VLN L++S+ +LR+N+E+R L+EN++
Sbjct: 60 ALLEGLTVVYKSSIDLYFYVIGSSYENELMLMAVLNCLFDSLRQMLRKNVEKRALLENME 119
Query: 235 AVMLAFDEICDGGVILDAXPTXSVSRAALRTEDVPLGEQTVAQGLQAXKGATEMGLI 65
+ LA DEI DGGVIL++ P V R ALR EDVPL EQTV+Q LQ+ K + L+
Sbjct: 120 GLFLAVDEIVDGGVILESDPQQVVHRVALRGEDVPLTEQTVSQVLQSAKEQIKWSLL 176
>BC015924-1|AAH15924.1| 210|Homo sapiens coatomer protein complex,
subunit zeta 2 protein.
Length = 210
Score = 186 bits (452), Expect = 1e-46
Identities = 89/174 (51%), Positives = 123/174 (70%)
Frame = -1
Query: 583 LFEPTLYIVKGMCILDYEGNRILAKYYDKDVLPTTKEQKAFEKNLFNKTHRANAEIIMLD 404
L EP+LY +K + ILD +G R+LAKYYD D P+ KEQ FEKN+FNKT R +EI
Sbjct: 38 LQEPSLYTIKAVFILDNDGRRLLAKYYD-DTFPSMKEQMVFEKNVFNKTSRTESEIAFFG 96
Query: 403 GLTCVYKSNVDLFFYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLDAVML 224
G+T VYK+++DLF YV+GSS+ENEL+L SVL L+ES++ +LR+N+E+R L+EN+D L
Sbjct: 97 GMTIVYKNSIDLFLYVVGSSYENELMLMSVLTCLFESLNHMLRKNVEKRWLLENMDGAFL 156
Query: 223 AFDEICDGGVILDAXPTXSVSRAALRTEDVPLGEQTVAQGLQAXKGATEMGLIE 62
DEI DGGVIL++ P + + R +D L EQ+VAQ LQ+ K + L++
Sbjct: 157 VLDEIVDGGVILESDPQQVIQKVNFRADDGGLTEQSVAQVLQSAKEQIKWSLLK 210
>AB047849-1|BAB17660.1| 210|Homo sapiens zeta2-COP protein.
Length = 210
Score = 186 bits (452), Expect = 1e-46
Identities = 89/174 (51%), Positives = 123/174 (70%)
Frame = -1
Query: 583 LFEPTLYIVKGMCILDYEGNRILAKYYDKDVLPTTKEQKAFEKNLFNKTHRANAEIIMLD 404
L EP+LY +K + ILD +G R+LAKYYD D P+ KEQ FEKN+FNKT R +EI
Sbjct: 38 LQEPSLYTIKAVFILDNDGRRLLAKYYD-DTFPSMKEQMVFEKNVFNKTSRTESEIAFFG 96
Query: 403 GLTCVYKSNVDLFFYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLDAVML 224
G+T VYK+++DLF YV+GSS+ENEL+L SVL L+ES++ +LR+N+E+R L+EN+D L
Sbjct: 97 GMTIVYKNSIDLFLYVVGSSYENELMLMSVLTCLFESLNHMLRKNVEKRWLLENMDGAFL 156
Query: 223 AFDEICDGGVILDAXPTXSVSRAALRTEDVPLGEQTVAQGLQAXKGATEMGLIE 62
DEI DGGVIL++ P + + R +D L EQ+VAQ LQ+ K + L++
Sbjct: 157 VLDEIVDGGVILESDPQQVIQKVNFRADDGGLTEQSVAQVLQSAKEQIKWSLLK 210
>AB037938-1|BAA90670.1| 210|Homo sapiens nonclathrin coat protein
zeta-COP protein.
Length = 210
Score = 186 bits (452), Expect = 1e-46
Identities = 89/174 (51%), Positives = 123/174 (70%)
Frame = -1
Query: 583 LFEPTLYIVKGMCILDYEGNRILAKYYDKDVLPTTKEQKAFEKNLFNKTHRANAEIIMLD 404
L EP+LY +K + ILD +G R+LAKYYD D P+ KEQ FEKN+FNKT R +EI
Sbjct: 38 LQEPSLYTIKAVFILDNDGRRLLAKYYD-DTFPSMKEQMVFEKNVFNKTSRTESEIAFFG 96
Query: 403 GLTCVYKSNVDLFFYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLDAVML 224
G+T VYK+++DLF YV+GSS+ENEL+L SVL L+ES++ +LR+N+E+R L+EN+D L
Sbjct: 97 GMTIVYKNSIDLFLYVVGSSYENELMLMSVLTCLFESLNHMLRKNVEKRWLLENMDGAFL 156
Query: 223 AFDEICDGGVILDAXPTXSVSRAALRTEDVPLGEQTVAQGLQAXKGATEMGLIE 62
DEI DGGVIL++ P + + R +D L EQ+VAQ LQ+ K + L++
Sbjct: 157 VLDEIVDGGVILESDPQQVIQKVNFRADDGGLTEQSVAQVLQSAKEQIKWSLLK 210
>CR457100-1|CAG33381.1| 144|Homo sapiens AP4S1 protein.
Length = 144
Score = 37.5 bits (83), Expect = 0.051
Identities = 28/127 (22%), Positives = 57/127 (44%), Gaps = 1/127 (0%)
Frame = -1
Query: 562 IVKGMCILDYEGNRILAKYYDK-DVLPTTKEQKAFEKNLFNKTHRANAEIIMLDGLTCVY 386
++K +++ +G L+KYY+ D+ T + K+ ++++ I +Y
Sbjct: 1 MIKFFLMVNKQGQTRLSKYYEHVDINKRTLLETEVIKSCLSRSNE-QCSFIEYKDFKLIY 59
Query: 385 KSNVDLFFYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLDAVMLAFDEIC 206
+ LF V + ENE+ + ++ E + R E ++ NLD V + DE+
Sbjct: 60 RQYAALFIVVGVNDTENEMAIYEFIHNFVEVLDEYFSRVSELDIMF-NLDKVHIILDEMV 118
Query: 205 DGGVILD 185
G I++
Sbjct: 119 LNGCIVE 125
>AF155159-1|AAD43329.1| 144|Homo sapiens adaptor-related protein
complex AP-4 sigma4 subunit protein.
Length = 144
Score = 37.5 bits (83), Expect = 0.051
Identities = 28/127 (22%), Positives = 57/127 (44%), Gaps = 1/127 (0%)
Frame = -1
Query: 562 IVKGMCILDYEGNRILAKYYDK-DVLPTTKEQKAFEKNLFNKTHRANAEIIMLDGLTCVY 386
++K +++ +G L+KYY+ D+ T + K+ ++++ I +Y
Sbjct: 1 MIKFFLMVNKQGQTRLSKYYEHVDINKRTLLETEVIKSCLSRSNE-QCSFIEYKDFKLIY 59
Query: 385 KSNVDLFFYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLDAVMLAFDEIC 206
+ LF V + ENE+ + ++ E + R E ++ NLD V + DE+
Sbjct: 60 RQYAALFIVVGVNDTENEMAIYEFIHNFVEVLDEYFSRVSELDIMF-NLDKVHIILDEMV 118
Query: 205 DGGVILD 185
G I++
Sbjct: 119 LNGCIVE 125
>AB030654-1|BAA82970.1| 144|Homo sapiens AP-4 clathrin
adaptor-related complex sigma4 subunit protein.
Length = 144
Score = 37.5 bits (83), Expect = 0.051
Identities = 28/127 (22%), Positives = 57/127 (44%), Gaps = 1/127 (0%)
Frame = -1
Query: 562 IVKGMCILDYEGNRILAKYYDK-DVLPTTKEQKAFEKNLFNKTHRANAEIIMLDGLTCVY 386
++K +++ +G L+KYY+ D+ T + K+ ++++ I +Y
Sbjct: 1 MIKFFLMVNKQGQTRLSKYYEHVDINKRTLLETEVIKSCLSRSNE-QCSFIEYKDFKLIY 59
Query: 385 KSNVDLFFYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLDAVMLAFDEIC 206
+ LF V + ENE+ + ++ E + R E ++ NLD V + DE+
Sbjct: 60 RQYAALFIVVGVNDTENEMAIYEFIHNFVEVLDEYFSRVSELDIMF-NLDKVHIILDEMV 118
Query: 205 DGGVILD 185
G I++
Sbjct: 119 LNGCIVE 125
>AF393369-1|AAL09586.1| 154|Homo sapiens sigma 1C adaptin protein.
Length = 154
Score = 31.1 bits (67), Expect = 4.4
Identities = 34/146 (23%), Positives = 61/146 (41%), Gaps = 4/146 (2%)
Frame = -1
Query: 532 EGNRILAKYYDKDVLPTTKEQKAFEKNL----FNKTHRANAEIIMLDGLTCVYKSNVDLF 365
+G L K+Y LP KE+K + + ++ HR ++ + + L VYK L+
Sbjct: 11 QGKLRLQKWYI--TLPD-KERKKITREIVQIILSRGHRTSSFVDWKE-LKLVYKRYASLY 66
Query: 364 FYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLDAVMLAFDEICDGGVILD 185
F + +NEL+ +++ E + E ++ N + DE GG I +
Sbjct: 67 FCCAIENQDNELLTLEIVHRYVELLDKYFGNVCELDIIF-NFEKAYFILDEFIIGGEIQE 125
Query: 184 AXPTXSVSRAALRTEDVPLGEQTVAQ 107
+V A+ D+ TV+Q
Sbjct: 126 TSKKIAVK--AIEDSDMLQEVSTVSQ 149
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,123,211
Number of Sequences: 237096
Number of extensions: 2415408
Number of successful extensions: 5596
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 5318
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5586
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9015132854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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