Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_pT_G10
         (751 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     24   1.8  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   7.1  
S76959-1|AAB33934.1|   85|Apis mellifera olfactory receptor prot...    21   9.3  

>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +1

Query: 574 VRTENLPSLCEPLCGLIIFHCIIIL 648
           +R  + PSL E L G   F C+ +L
Sbjct: 31  LRLHDNPSLREGLAGASTFRCVFVL 55


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = -1

Query: 148 RTEDVPLGEQTVAQGLQAXKGATEM 74
           RTE+V L    V QGL   K   E+
Sbjct: 340 RTEEVALDRTPVTQGLLRVKKEEEL 364


>S76959-1|AAB33934.1|   85|Apis mellifera olfactory receptor
           protein.
          Length = 85

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 9/33 (27%), Positives = 16/33 (48%)
 Frame = +2

Query: 20  IFSLVSLLQLCFFHFNQAHFSCSLXCLQSLGHC 118
           + SL+ L+      FN  H S +    +++G C
Sbjct: 21  VSSLIILISYALILFNILHMSSAEGWFKAIGTC 53


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 208,928
Number of Sequences: 438
Number of extensions: 4431
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23510295
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)