Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_pT_G05
         (792 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z80216-6|CAB02285.2|  313|Caenorhabditis elegans Hypothetical pr...   109   2e-24

>Z80216-6|CAB02285.2|  313|Caenorhabditis elegans Hypothetical
           protein F10G8.6 protein.
          Length = 313

 Score =  109 bits (262), Expect = 2e-24
 Identities = 47/92 (51%), Positives = 69/92 (75%)
 Frame = -2

Query: 575 KVGLLDIDLCGPSVPYILNLEGHDVHQSAEGWVPVYMDSEQRLGVLSIGFLLTSRNDSVV 396
           +V +LD+D+CGPS P ++ +E  +VH SA+GW PV +  +  L ++SI FLL  +ND+V+
Sbjct: 90  QVAILDVDICGPSQPRMMGVEDEEVHNSADGWTPVGI--QPNLTLMSIAFLLGDKNDAVI 147

Query: 395 LRGPKKTSIIKQFLEDVYWQELDFLVIDTPPG 300
            RG +K  +IKQFL+DV W E+D+L+IDTPPG
Sbjct: 148 WRGARKNGMIKQFLKDVDWGEVDYLLIDTPPG 179


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,210,448
Number of Sequences: 27780
Number of extensions: 324799
Number of successful extensions: 689
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 670
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 688
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1924757034
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)