Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_pT_G04
         (635 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50469-1|AAA93473.1|  160|Anopheles gambiae protein ( Anopheles ...    26   1.1  
AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform ...    24   4.6  
AY028783-1|AAK32957.1|  499|Anopheles gambiae cytochrome P450 pr...    24   4.6  

>U50469-1|AAA93473.1|  160|Anopheles gambiae protein ( Anopheles
           gambiae putativecuticle protein mRNA, partial cds. ).
          Length = 160

 Score = 25.8 bits (54), Expect = 1.1
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = -1

Query: 311 AYAAPASKTVVSQSLTQSHPAQIAPLLAY 225
           +YAAP +KT VSQ    S+ A +A  ++Y
Sbjct: 133 SYAAPLTKTYVSQP-ALSYAATVAKTISY 160



 Score = 23.8 bits (49), Expect = 4.6
 Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 2/32 (6%)
 Frame = -1

Query: 311 AYAAPASKTV--VSQSLTQSHPAQIAPLLAYA 222
           AYAAP +KT+   +   T+++ AQ  P L+YA
Sbjct: 106 AYAAPVAKTISYAAPVATKTYVAQ--PALSYA 135


>AY943928-1|AAX49501.1|  753|Anopheles gambiae laccase-2 isoform A
           protein.
          Length = 753

 Score = 23.8 bits (49), Expect = 4.6
 Identities = 8/28 (28%), Positives = 17/28 (60%)
 Frame = -1

Query: 287 TVVSQSLTQSHPAQIAPLLAYAGHGLDY 204
           TV++      HPAQ+  +++++G   D+
Sbjct: 410 TVIATDGEPVHPAQVNTIISFSGERYDF 437


>AY028783-1|AAK32957.1|  499|Anopheles gambiae cytochrome P450
           protein.
          Length = 499

 Score = 23.8 bits (49), Expect = 4.6
 Identities = 12/32 (37%), Positives = 14/32 (43%)
 Frame = +3

Query: 276 RDHSLAGGSGVRGMSEHWSAITCVSSGITSVG 371
           R H    G  +   SE WS +   SS I S G
Sbjct: 106 RQHDPLSGHMLNSGSERWSVLRHASSPIFSTG 137


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 361,738
Number of Sequences: 2352
Number of extensions: 6130
Number of successful extensions: 18
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 62305095
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)