Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_pT_G03
         (828 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50479-1|AAA93478.1|  151|Anopheles gambiae protein ( Anopheles ...    28   0.40 
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    25   2.2  
M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.              25   3.8  
DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1 pro...    25   3.8  
U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.          24   5.0  
U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.          24   5.0  
U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.          24   5.0  
CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.           24   5.0  
AY344832-1|AAR05803.1|  333|Anopheles gambiae ICHIT protein.           24   6.6  
AY344831-1|AAR05802.1|  333|Anopheles gambiae ICHIT protein.           24   6.6  

>U50479-1|AAA93478.1|  151|Anopheles gambiae protein ( Anopheles
           gambiae putativeribosomal protein S13 mRNA, complete
           cds. ).
          Length = 151

 Score = 27.9 bits (59), Expect = 0.40
 Identities = 10/33 (30%), Positives = 20/33 (60%)
 Frame = -1

Query: 399 LMKILKENGFKPTLPEAGYFVVADWTDLEKKID 301
           +++I+K  G KP +PE  YF++     + K ++
Sbjct: 71  VLRIMKAVGLKPDIPEDLYFLIKKAVSIRKHLE 103


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 25.4 bits (53), Expect = 2.2
 Identities = 10/26 (38%), Positives = 11/26 (42%)
 Frame = -2

Query: 761 LPICARSTTCFVSPMRSTSGWCTSPN 684
           L  C   TTC      +   WCT PN
Sbjct: 33  LTTCPGKTTCSQCIQTTNCRWCTMPN 58


>M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.
          Length = 613

 Score = 24.6 bits (51), Expect = 3.8
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = -3

Query: 589 RVGVRTSRPDEESASCAPELCVHVLHASRGSRG 491
           R+G R+    ++ A+ AP +     H+SR  RG
Sbjct: 181 RMGARSVIELQQQAAAAPMMTAQGAHSSRNRRG 213


>DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1
           protein.
          Length = 545

 Score = 24.6 bits (51), Expect = 3.8
 Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
 Frame = -1

Query: 459 DSPECYF-YSLARELRPKRDYLMKILKE 379
           DS +C    +LAR L PK DY+ + L E
Sbjct: 430 DSSKCTCPIALARRLDPKGDYVKRYLPE 457


>U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 24.2 bits (50), Expect = 5.0
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = -1

Query: 417 RPKRDYLMKILKENGFKPT 361
           R   DYLMKIL E G+  T
Sbjct: 184 RDLTDYLMKILTERGYSFT 202


>U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 24.2 bits (50), Expect = 5.0
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = -1

Query: 417 RPKRDYLMKILKENGFKPT 361
           R   DYLMKIL E G+  T
Sbjct: 184 RDLTDYLMKILTERGYSFT 202


>U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 24.2 bits (50), Expect = 5.0
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = -1

Query: 417 RPKRDYLMKILKENGFKPT 361
           R   DYLMKIL E G+  T
Sbjct: 184 RDLTDYLMKILTERGYSFT 202


>CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.
          Length = 376

 Score = 24.2 bits (50), Expect = 5.0
 Identities = 11/19 (57%), Positives = 12/19 (63%)
 Frame = -1

Query: 417 RPKRDYLMKILKENGFKPT 361
           R   DYLMKIL E G+  T
Sbjct: 184 RDLTDYLMKILTERGYSFT 202


>AY344832-1|AAR05803.1|  333|Anopheles gambiae ICHIT protein.
          Length = 333

 Score = 23.8 bits (49), Expect = 6.6
 Identities = 9/35 (25%), Positives = 16/35 (45%)
 Frame = -2

Query: 794 ARCSPNASWNSLPICARSTTCFVSPMRSTSGWCTS 690
           A+C P +  +      R  T  + P  +T+ W T+
Sbjct: 86  AKCEPQSPGDQTTTTLRPATTTLRPTTTTTDWITT 120


>AY344831-1|AAR05802.1|  333|Anopheles gambiae ICHIT protein.
          Length = 333

 Score = 23.8 bits (49), Expect = 6.6
 Identities = 9/35 (25%), Positives = 16/35 (45%)
 Frame = -2

Query: 794 ARCSPNASWNSLPICARSTTCFVSPMRSTSGWCTS 690
           A+C P +  +      R  T  + P  +T+ W T+
Sbjct: 86  AKCEPQSPGDQTTTTLRPATTTLRPTTTTTDWITT 120


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 834,575
Number of Sequences: 2352
Number of extensions: 16539
Number of successful extensions: 47
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 88150236
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)