Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_pT_F22
(685 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_06_0071 + 25355853-25356095,25356183-25356239,25356848-253570... 32 0.49
08_01_0108 - 791835-792398 31 0.85
07_01_0045 - 357463-357921 31 0.85
06_03_0432 - 20715482-20716123 31 0.85
06_01_0193 - 1491710-1491739,1492194-1492319,1492631-1492766,149... 31 0.85
04_03_0284 + 13896307-13896765 31 0.85
02_05_0101 - 25824093-25824112,25824734-25824842,25824927-258264... 31 0.85
03_06_0695 - 35599454-35600018,35600445-35600491,35600556-35600672 31 1.1
05_01_0569 + 5056261-5057712 30 1.5
11_06_0732 - 26740718-26741704,26741876-26742478 30 2.0
10_02_0149 - 5873273-5874514,5874826-5875731,5875903-5876505 30 2.0
06_01_1011 + 7879283-7879885,7880057-7880962,7881274-7882515 30 2.0
05_01_0180 + 1268129-1268237,1268382-1268731,1268903-1269808,127... 30 2.0
12_02_0507 + 19810446-19811048,19811220-19811466,19811590-198121... 29 2.6
10_06_0026 + 9783435-9783481,9783562-9783596,9783801-9784033 29 2.6
10_05_0020 - 8094412-8094653,8094692-8095017,8095632-8095798 29 2.6
10_01_0334 - 3680612-3681266,3682253-3682374 29 2.6
08_01_0973 + 9803917-9804519,9804691-9805596,9805908-9807149 29 2.6
06_03_0228 - 18439659-18440900,18441212-18441736,18441813-184421... 29 2.6
04_03_0101 - 11242252-11243295,11243607-11244131,11244208-112445... 29 2.6
10_03_0033 - 7248131-7248711,7248947-7249079,7249470-7249994,725... 29 3.4
07_03_1794 - 29580767-29584189 29 3.4
04_02_0046 - 9181351-9181791,9182143-9182439 29 3.4
02_02_0312 + 8855664-8855807,8856402-8856465,8858399-8858547,885... 29 3.4
12_02_0030 + 12469707-12469902,12470337-12470658,12472208-124722... 29 4.5
09_04_0258 - 16175258-16176069,16176111-16176414 29 4.5
05_03_0226 - 10645036-10646001,10646313-10646828,10646905-106472... 29 4.5
03_05_1116 + 30522573-30523112,30523201-30523353,30524053-30524325 29 4.5
03_02_0955 - 12690405-12690842,12690940-12691130,12691208-126917... 29 4.5
03_02_0025 + 5084003-5084303,5084449-5084639,5084793-5084873,508... 29 4.5
02_05_0785 - 31730300-31730701,31730785-31730856,31730940-317328... 29 4.5
01_01_0668 - 5109476-5110112,5110196-5110439,5110519-5110917,511... 29 4.5
07_03_1533 + 27523811-27524710 28 6.0
07_01_0471 + 3559951-3560145,3561259-3561300,3561544-3561640,356... 28 6.0
06_03_0206 - 17898551-17900056,17900439-17900564,17902420-17902881 28 6.0
03_01_0540 - 4055635-4055743,4055829-4055981,4056037-4056104,405... 28 6.0
02_05_0856 - 32272757-32273494,32273578-32273866,32273961-322743... 28 6.0
01_01_0218 + 1856104-1856700,1856814-1857452 28 6.0
11_01_0125 + 1018059-1018403 28 7.9
06_03_1472 - 30377744-30378622 28 7.9
06_03_0809 + 24814590-24816593 28 7.9
06_01_1062 + 8594333-8594860 28 7.9
05_03_0245 + 10890555-10890962 28 7.9
05_03_0244 + 10857139-10857516 28 7.9
>05_06_0071 +
25355853-25356095,25356183-25356239,25356848-25357069,
25357143-25357227,25357993-25358083,25358172-25358336,
25358583-25358699,25358773-25358848,25359940-25360102,
25360184-25361064
Length = 699
Score = 31.9 bits (69), Expect = 0.49
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +3
Query: 102 CRYKGS*IGGDYRGRVGEGRDDRAVGHGSDNRPLAEV 212
CR G + G+ G GEG DD A+ G +N P+ E+
Sbjct: 641 CRLFGFSLTGNMLGEDGEGLDDGAIEAGCENPPVLEL 677
>08_01_0108 - 791835-792398
Length = 187
Score = 31.1 bits (67), Expect = 0.85
Identities = 18/44 (40%), Positives = 24/44 (54%)
Frame = +2
Query: 143 KSRRGERRQSCRPRERQQTACGGGGSQTELLPGSERRGQRRPQE 274
+SR +RR+ R R R++ CGGGG G + RG RP E
Sbjct: 117 RSRTRQRRRRSRRRRRRRRTCGGGGGCGR---GGDARG--RPAE 155
>07_01_0045 - 357463-357921
Length = 152
Score = 31.1 bits (67), Expect = 0.85
Identities = 18/44 (40%), Positives = 24/44 (54%)
Frame = +2
Query: 143 KSRRGERRQSCRPRERQQTACGGGGSQTELLPGSERRGQRRPQE 274
+SR +RR+ R R R++ CGGGG G + RG RP E
Sbjct: 82 RSRTRQRRRRSRRRRRRRRTCGGGGGCGR---GGDARG--RPAE 120
>06_03_0432 - 20715482-20716123
Length = 213
Score = 31.1 bits (67), Expect = 0.85
Identities = 23/57 (40%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +2
Query: 53 KGFSGIGKKEKLQE*NMPIQRELNRRRLQGKSRRGER-RQSCRPRE-RQQTACGGGG 217
K F+G G+ + Q E R L+ +S+ G R R S PRE RQ A GGGG
Sbjct: 140 KRFNGFGRTHPVL-----FQAEAMREILRKRSKLGPRSRSSINPREARQAGAAGGGG 191
>06_01_0193 -
1491710-1491739,1492194-1492319,1492631-1492766,
1493048-1493112,1493213-1493305,1493433-1493498,
1493763-1493843,1493977-1494032,1494692-1494780,
1495340-1495425,1495531-1495647,1496109-1496254,
1496665-1496725,1496831-1496914,1497028-1497135,
1497286-1497388,1497802-1497845,1498100-1498584,
1499417-1499603,1500150-1500362,1501066-1501323
Length = 877
Score = 31.1 bits (67), Expect = 0.85
Identities = 18/44 (40%), Positives = 24/44 (54%)
Frame = +2
Query: 143 KSRRGERRQSCRPRERQQTACGGGGSQTELLPGSERRGQRRPQE 274
+SR +RR+ R R R++ CGGGG G + RG RP E
Sbjct: 340 RSRTRQRRRRSRRRRRRRKTCGGGGGCGR---GGDARG--RPAE 378
>04_03_0284 + 13896307-13896765
Length = 152
Score = 31.1 bits (67), Expect = 0.85
Identities = 18/44 (40%), Positives = 24/44 (54%)
Frame = +2
Query: 143 KSRRGERRQSCRPRERQQTACGGGGSQTELLPGSERRGQRRPQE 274
+SR +RR+ R R R++ CGGGG G + RG RP E
Sbjct: 82 RSRTRQRRRRSRRRRRRRRTCGGGGGCGR---GGDARG--RPAE 120
>02_05_0101 -
25824093-25824112,25824734-25824842,25824927-25826429,
25826596-25827333,25827712-25827919,25828455-25830409,
25830868-25830960,25831044-25831100,25831189-25831272,
25831345-25831437,25831622-25832053,25833593-25833933,
25834663-25835215
Length = 2061
Score = 31.1 bits (67), Expect = 0.85
Identities = 18/44 (40%), Positives = 24/44 (54%)
Frame = +2
Query: 143 KSRRGERRQSCRPRERQQTACGGGGSQTELLPGSERRGQRRPQE 274
+SR +RR+ R R R++ CGGGG G + RG RP E
Sbjct: 131 RSRTRQRRRRSRRRRRRRRTCGGGGGCGR---GGDARG--RPTE 169
>03_06_0695 - 35599454-35600018,35600445-35600491,35600556-35600672
Length = 242
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +2
Query: 143 KSRRGERRQSCRPRERQQTACGGGG 217
+SR +RR+ R R R++ CGGGG
Sbjct: 172 RSRTRQRRRRSRRRRRRRRTCGGGG 196
>05_01_0569 + 5056261-5057712
Length = 483
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/41 (41%), Positives = 20/41 (48%)
Frame = +2
Query: 143 KSRRGERRQSCRPRERQQTACGGGGSQTELLPGSERRGQRR 265
K R+ S P R + GGGG E P +ERRG RR
Sbjct: 81 KRRKKAPTNSTSPSNRDGSGGGGGGEGNE--PTAERRGSRR 119
>11_06_0732 - 26740718-26741704,26741876-26742478
Length = 529
Score = 29.9 bits (64), Expect = 2.0
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +3
Query: 126 GGDYRGRVGEG-RDDRAVGHGSDNRPLAEVVVARQSFCLEVSGAGSDDLRS 275
G + G GE R +RAVG G +N P++ R S +VS A S +S
Sbjct: 374 GEEEAGDAGEAARGERAVGDGYENSPMSNNSRKRGSSSCDVSTASSPGKKS 424
>10_02_0149 - 5873273-5874514,5874826-5875731,5875903-5876505
Length = 916
Score = 29.9 bits (64), Expect = 2.0
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +3
Query: 126 GGDYRGRVGEG-RDDRAVGHGSDNRPLAEVVVARQSFCLEVSGAGSDDLRS 275
G + G GE R +RAVG G +N P++ R S +VS A S +S
Sbjct: 374 GEEEAGDAGEAARGERAVGDGYENSPMSNNSRKRGSSSCDVSTASSPGKKS 424
>06_01_1011 + 7879283-7879885,7880057-7880962,7881274-7882515
Length = 916
Score = 29.9 bits (64), Expect = 2.0
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +3
Query: 126 GGDYRGRVGEG-RDDRAVGHGSDNRPLAEVVVARQSFCLEVSGAGSDDLRS 275
G + G GE R +RAVG G +N P++ R S +VS A S +S
Sbjct: 374 GEEEAGDAGEAARGERAVGDGYENSPMSNNSRKRGSSSCDVSTASSPGKKS 424
>05_01_0180 +
1268129-1268237,1268382-1268731,1268903-1269808,
1270120-1271361
Length = 868
Score = 29.9 bits (64), Expect = 2.0
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +3
Query: 126 GGDYRGRVGEG-RDDRAVGHGSDNRPLAEVVVARQSFCLEVSGAGSDDLRS 275
G + G GE R +RAVG G +N P++ R S +VS A S +S
Sbjct: 326 GEEEAGDAGEAARGERAVGDGYENSPMSNNSRKRGSSSYDVSTASSPGKKS 376
>12_02_0507 +
19810446-19811048,19811220-19811466,19811590-19812125,
19812397-19813620
Length = 869
Score = 29.5 bits (63), Expect = 2.6
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +3
Query: 126 GGDYRGRVGEG-RDDRAVGHGSDNRPLAEVVVARQSFCLEVSGAGSDDLRS 275
G + G GE R +RAVG G +N P++ R S +VS A S +S
Sbjct: 333 GEEEAGDAGEAARGERAVGDGYENSPMSTNSRKRGSSSCDVSTASSPGKKS 383
>10_06_0026 + 9783435-9783481,9783562-9783596,9783801-9784033
Length = 104
Score = 29.5 bits (63), Expect = 2.6
Identities = 20/57 (35%), Positives = 23/57 (40%), Gaps = 2/57 (3%)
Frame = +3
Query: 315 RRVRG--LREGGDCRNHTGSDECSVVHSRSYQRRSMDHTGAVLGQRTNSRHDSAVGQ 479
RR RG E DC+N +E S VHS R MDH HD A +
Sbjct: 16 RRARGRIFVEIEDCKNEKMFEESSWVHSHLISRGFMDHYKCWRKHGDQETHDVATDE 72
>10_05_0020 - 8094412-8094653,8094692-8095017,8095632-8095798
Length = 244
Score = 29.5 bits (63), Expect = 2.6
Identities = 29/124 (23%), Positives = 46/124 (37%), Gaps = 3/124 (2%)
Frame = +3
Query: 126 GGDYRGRVGEGRDDRAVGHGSD---NRPLAEVVVARQSFCLEVSGAGSDDLRSVEGDTVN 296
GGD R R+ D+RAV ++ RPL+ + C+ V G G +
Sbjct: 110 GGDARRRLDVEHDERAVRAEAEVVGRRPLSSSPLVLTPACICVGGGGGAATATWTAGGAG 169
Query: 297 SIQDDSRRVRGLREGGDCRNHTGSDECSVVHSRSYQRRSMDHTGAVLGQRTNSRHDSAVG 476
+D+ +R + D R + C + RRS G + +R + G
Sbjct: 170 RAEDEEQRTDDEDQDDDDRAEATAARCPGWAAAG--RRSGLRGGGLREKRGIEGEEKVKG 227
Query: 477 QRSH 488
Q H
Sbjct: 228 QERH 231
>10_01_0334 - 3680612-3681266,3682253-3682374
Length = 258
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 6/46 (13%)
Frame = +2
Query: 131 RLQGKSRRGERRQSCRPRERQQTACG------GGGSQTELLPGSER 250
+++G+ + +RR++ R R+RQQ A G G E L SER
Sbjct: 37 KIEGQEKATQRRRAARMRQRQQAARGREDGEKASGEDEEALASSER 82
>08_01_0973 + 9803917-9804519,9804691-9805596,9805908-9807149
Length = 916
Score = 29.5 bits (63), Expect = 2.6
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +3
Query: 126 GGDYRGRVGEG-RDDRAVGHGSDNRPLAEVVVARQSFCLEVSGAGSDDLRS 275
G + G GE R +RAVG G +N P++ R S +VS A S +S
Sbjct: 374 GEEEAGDAGEAARGERAVGDGYENSPMSTNSRKRGSSSCDVSTASSPGKKS 424
>06_03_0228 -
18439659-18440900,18441212-18441736,18441813-18442118,
18442290-18442877
Length = 886
Score = 29.5 bits (63), Expect = 2.6
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +3
Query: 126 GGDYRGRVGEG-RDDRAVGHGSDNRPLAEVVVARQSFCLEVSGAGSDDLRS 275
G + G GE R +RAVG G +N P++ R S +VS A S +S
Sbjct: 344 GEEEAGDAGEAARGERAVGDGYENSPMSTNSRKRGSSSCDVSTASSPGKKS 394
>04_03_0101 -
11242252-11243295,11243607-11244131,11244208-11244513,
11244692-11245231
Length = 804
Score = 29.5 bits (63), Expect = 2.6
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +3
Query: 126 GGDYRGRVGEG-RDDRAVGHGSDNRPLAEVVVARQSFCLEVSGAGSDDLRS 275
G + G GE R +RAVG G +N P++ R S +VS A S +S
Sbjct: 328 GEEEAGDAGEAARGERAVGDGYENSPMSTNSRKRGSSSCDVSTASSPGKKS 378
>10_03_0033 -
7248131-7248711,7248947-7249079,7249470-7249994,
7250545-7250764,7250913-7251145
Length = 563
Score = 29.1 bits (62), Expect = 3.4
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +3
Query: 126 GGDYRGRVGE-GRDDRAVGHGSDNRPLAEVVVARQSFCLEVSGAGSDDLRS 275
G + G GE R +RAVG G +N P++ R S +VS A S +S
Sbjct: 197 GEEEAGDAGETARGERAVGDGYENSPMSTNNRKRGSSSCDVSTASSPGKKS 247
>07_03_1794 - 29580767-29584189
Length = 1140
Score = 29.1 bits (62), Expect = 3.4
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 2/93 (2%)
Frame = +3
Query: 228 SFCLEV--SGAGSDDLRSVEGDTVNSIQDDSRRVRGLREGGDCRNHTGSDECSVVHSRSY 401
S CL+ + + SD+ S TVNS S+R++GLR GGD + +G+ S++
Sbjct: 556 SECLDTLTNKSDSDEKGSSVVVTVNSF-GGSKRIQGLRIGGDENSMSGN---SLIQEELR 611
Query: 402 QRRSMDHTGAVLGQRTNSRHDSAVGQRSHHTGL 500
+S+ G V + ++H + G + L
Sbjct: 612 DDKSLKTPGYVNLVGSTNQHSLSDGSTTEEISL 644
>04_02_0046 - 9181351-9181791,9182143-9182439
Length = 245
Score = 29.1 bits (62), Expect = 3.4
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = -3
Query: 464 IVPGVSSLSQYSTSVVHGSPL-VAPAVYNAALIAPGVVPAVAALSQAPHS 318
++ GV+++ +VV GSP + P L PGV P + L APHS
Sbjct: 156 MMEGVNAVWAQPLAVVPGSPANLEPIGELRGLAEPGVEPNPSRLRSAPHS 205
>02_02_0312 +
8855664-8855807,8856402-8856465,8858399-8858547,
8859258-8859674
Length = 257
Score = 29.1 bits (62), Expect = 3.4
Identities = 23/89 (25%), Positives = 34/89 (38%), Gaps = 2/89 (2%)
Frame = +3
Query: 252 AGSDDLRSVEGDTVNSIQDDSRRVRGLREGGDCRN--HTGSDECSVVHSRSYQRRSMDHT 425
AGS + + G+ + RRV G GGD + + E + +
Sbjct: 137 AGSGGVAADGGEGDGDEDGELRRVVGTDGGGDGNSGPDLAAPEADLRPPKGRSGVGQTRG 196
Query: 426 GAVLGQRTNSRHDSAVGQRSHHTGLGDGG 512
V R NSR +S ++ H GDGG
Sbjct: 197 DGVGDNRVNSRRESTSRRQQRHGARGDGG 225
>12_02_0030 +
12469707-12469902,12470337-12470658,12472208-12472245,
12472486-12473573
Length = 547
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/44 (29%), Positives = 19/44 (43%)
Frame = +2
Query: 110 QRELNRRRLQGKSRRGERRQSCRPRERQQTACGGGGSQTELLPG 241
+R RR+ R +R RP R+Q GG G+ + G
Sbjct: 54 KRSSGTRRISWVGERRQRSDEARPERRRQEGAGGRGAGVRRVEG 97
>09_04_0258 - 16175258-16176069,16176111-16176414
Length = 371
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +2
Query: 110 QRELNRRRLQGKSRRGERRQSCRPRERQQTACGGGGSQ 223
+R+ R G + RQ+ RPR + A GGGG +
Sbjct: 66 RRDARRHTTGGVAAAASERQTTRPRGGARAAGGGGGGE 103
>05_03_0226 -
10645036-10646001,10646313-10646828,10646905-10647210,
10647382-10647984
Length = 796
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +3
Query: 156 GRDDRAVGHGSDNRPLAEVVVARQSFCLEVSGAGS 260
GR +RAVG G +N P++ R S +VS A S
Sbjct: 357 GRGERAVGDGYENSPMSNNSRKRGSSSCDVSTASS 391
>03_05_1116 + 30522573-30523112,30523201-30523353,30524053-30524325
Length = 321
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +2
Query: 167 QSCRPRERQQTACGGGGSQTELLPG 241
+S RPR++Q+ A GGGG PG
Sbjct: 64 KSRRPRQQQEAAGGGGGGAGRKTPG 88
>03_02_0955 -
12690405-12690842,12690940-12691130,12691208-12691718,
12692240-12693171,12693260-12693351,12693430-12693509,
12693568-12693621,12693734-12693850,12693949-12694194,
12694273-12694432,12694512-12694576,12694686-12694877,
12694980-12695061,12695153-12695925
Length = 1310
Score = 28.7 bits (61), Expect = 4.5
Identities = 20/58 (34%), Positives = 25/58 (43%)
Frame = -3
Query: 395 PAVYNAALIAPGVVPAVAALSQAPHSPAVVLDAVNGVPLDTPEVVAARAAHFQAKALS 222
PAV + A++AL AP P+ L AV + D P R F AK LS
Sbjct: 71 PAVLALSPSPTAAAAALSALLSAPSWPSPTLLAVASLLRDLPAAYRHRVPAFVAKVLS 128
>03_02_0025 +
5084003-5084303,5084449-5084639,5084793-5084873,
5084972-5085319,5085409-5086293
Length = 601
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +2
Query: 47 DAKGFSGIGKKEKLQE*NMPIQRELNRRRLQGKSRRGERRQSCRPRERQQ 196
+ +G G G+KE+ +E ++E RR Q + R+ + RER++
Sbjct: 471 EEEGGGGKGEKEREEEERRQREKEEEERRRQEEERKRREEEEKERREREE 520
>02_05_0785 -
31730300-31730701,31730785-31730856,31730940-31732864,
31733000-31733150,31733944-31734009,31734247-31734645
Length = 1004
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = +2
Query: 317 ESAGLERGRRLQEPHRER*VQRCTQQELPEAIHGPHWC 430
++A ER RR + P R + Q QQE P A GP C
Sbjct: 28 DAAEKERRRRRRAPRRTK--QAAAQQEEPAAAAGPRSC 63
>01_01_0668 -
5109476-5110112,5110196-5110439,5110519-5110917,
5111390-5111668,5111886-5112257,5112371-5112475,
5112832-5112909,5112990-5113199,5113287-5113406,
5113508-5113606,5113685-5113750,5113914-5114141,
5114216-5114521,5115324-5115381
Length = 1066
Score = 28.7 bits (61), Expect = 4.5
Identities = 20/65 (30%), Positives = 27/65 (41%), Gaps = 2/65 (3%)
Frame = -2
Query: 255 PRRSLPGKSSVW-LPPPPQAVCCRSRGLQLCRLSPRLLFPCSLRLFSSLCIGIFYSCS-F 82
P P +W LPPPP + C S P PC L + +G+ S +
Sbjct: 403 PGPKAPSAHPIWALPPPPPNLDCNSLACPEPLTDPPAGAPCVCVL--PIKVGVRLSVDLY 460
Query: 81 SFFPI 67
SFFP+
Sbjct: 461 SFFPL 465
>07_03_1533 + 27523811-27524710
Length = 299
Score = 28.3 bits (60), Expect = 6.0
Identities = 21/59 (35%), Positives = 23/59 (38%), Gaps = 5/59 (8%)
Frame = +3
Query: 249 GAGSDDLRS-----VEGDTVNSIQDDSRRVRGLREGGDCRNHTGSDECSVVHSRSYQRR 410
G G D RS V D DD+ RV G G NHT VV R +RR
Sbjct: 119 GGGDGDRRSNRKSMVTVDAEVDTDDDALRVNGTGAGAGAGNHTRGSGGVVVRRRHRRRR 177
>07_01_0471 +
3559951-3560145,3561259-3561300,3561544-3561640,
3561708-3561727
Length = 117
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/46 (26%), Positives = 22/46 (47%)
Frame = -3
Query: 422 VVHGSPLVAPAVYNAALIAPGVVPAVAALSQAPHSPAVVLDAVNGV 285
++H +AP NA + P ++P A + P P+ + A G+
Sbjct: 15 IIHVVDDLAPPPPNAIAVPPRILPPATAFRRRPPPPSEAVRAARGI 60
>06_03_0206 - 17898551-17900056,17900439-17900564,17902420-17902881
Length = 697
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +2
Query: 128 RRLQGKSRRGERRQSCRPRERQQTACGGGGS-QTELLPGSERRGQR 262
RR++ + RRG +R Q++CGGG T L+ + G+R
Sbjct: 134 RRIRRRGRRGGVAGDDDEADRPQSSCGGGEHLSTSLMEHDKLHGER 179
>03_01_0540 -
4055635-4055743,4055829-4055981,4056037-4056104,
4056486-4056580,4057180-4057241,4057371-4057410,
4058124-4059141,4059231-4059611,4059873-4059880,
4061005-4061067,4061416-4061719
Length = 766
Score = 28.3 bits (60), Expect = 6.0
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = -2
Query: 414 WIASGSSCCVQRCTHRSRCGSCSRRPL 334
W+AS +C + CT S+ G S +P+
Sbjct: 335 WVASDEACQFELCTFSSKTGRWSSKPV 361
>02_05_0856 -
32272757-32273494,32273578-32273866,32273961-32274312,
32275232-32275850
Length = 665
Score = 28.3 bits (60), Expect = 6.0
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = -3
Query: 449 SSLSQYSTSVVHGSPLVA-PAVYNAALIAPGVVPAVAALSQAPHSPAVVLDAVNGVPLDT 273
SS + +T+ V L P + ++ G +P S+ PH P V+D V V LDT
Sbjct: 73 SSQQRTTTTTVSSHGLFRLPTALSPPVLTRGSIPPPP--SRRPHPPRAVVDRVRAVLLDT 130
>01_01_0218 + 1856104-1856700,1856814-1857452
Length = 411
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/53 (28%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Frame = -3
Query: 461 VPGVSSLSQYSTSVVHGSPLVAPAVYNAALIAPG--VVPAVAALSQAPHSPAV 309
+ G+ S++ + +GSPL++P + + + +AP +P A S +P +P V
Sbjct: 26 IMGMISMANFPN--FYGSPLLSPMLLSVSSLAPSSTPMPTPTAPSPSPETPCV 76
>11_01_0125 + 1018059-1018403
Length = 114
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +2
Query: 137 QGKSRRGERRQSCRPRERQQTACGGGGS 220
+G +RRG RRQ RPR+ + + GGG+
Sbjct: 68 RGAARRGRRRQ--RPRDEKASGGRGGGA 93
>06_03_1472 - 30377744-30378622
Length = 292
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +2
Query: 128 RRLQGKSRRGERR-QSCRPRERQQTACGGGGSQ 223
R L G +R GER PR+R+Q GGGG +
Sbjct: 62 RELPGLARIGEREWYFFVPRDRKQATGGGGGGR 94
>06_03_0809 + 24814590-24816593
Length = 667
Score = 27.9 bits (59), Expect = 7.9
Identities = 20/60 (33%), Positives = 29/60 (48%)
Frame = -3
Query: 458 PGVSSLSQYSTSVVHGSPLVAPAVYNAALIAPGVVPAVAALSQAPHSPAVVLDAVNGVPL 279
P + L+ S + SP+ + NA+ VPAVAA + P SP V D + VP+
Sbjct: 56 PCTAYLTFRSAPPSYASPITVSYLLNAS------VPAVAAANSVPVSPPVARDGLLLVPV 109
>06_01_1062 + 8594333-8594860
Length = 175
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +2
Query: 110 QRELNRRRLQGKSRRGERRQSCRPRERQQTACGGGGSQTELLPGSERR 253
Q L R G++ RG S RPR + GGG++ ++ G R
Sbjct: 6 QPHLRVRAADGRAPRGSH--SARPRAAKPARLAGGGARAPMVAGGGHR 51
>05_03_0245 + 10890555-10890962
Length = 135
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/32 (40%), Positives = 15/32 (46%), Gaps = 4/32 (12%)
Frame = -2
Query: 423 CGPWIASGSSCCVQRC----THRSRCGSCSRR 340
C G SCC RC + R CGSCS +
Sbjct: 90 CNKACKHGRSCCGGRCVDLLSDRDNCGSCSNQ 121
>05_03_0244 + 10857139-10857516
Length = 125
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/32 (40%), Positives = 15/32 (46%), Gaps = 4/32 (12%)
Frame = -2
Query: 423 CGPWIASGSSCCVQRC----THRSRCGSCSRR 340
C G SCC RC + R CGSCS +
Sbjct: 81 CNKACKHGRSCCGGRCVDLLSDRDNCGSCSNQ 112
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,397,478
Number of Sequences: 37544
Number of extensions: 386117
Number of successful extensions: 1927
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 1802
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1920
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1733104716
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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