Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_pT_F19
         (801 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U88173-6|AAM15575.1| 1282|Caenorhabditis elegans Hypothetical pr...    30   2.2  
U88173-5|AAM15574.1| 1280|Caenorhabditis elegans Hypothetical pr...    30   2.2  
Z81576-3|CAB04641.1|  534|Caenorhabditis elegans Hypothetical pr...    28   6.8  
AL032630-2|CAA21559.1|  217|Caenorhabditis elegans Hypothetical ...    28   6.8  
Z81533-14|CAB04331.2|  707|Caenorhabditis elegans Hypothetical p...    28   8.9  
Z81146-5|CAB03522.3|  699|Caenorhabditis elegans Hypothetical pr...    28   8.9  
AC024824-3|AAK85501.1|  543|Caenorhabditis elegans Hypothetical ...    28   8.9  

>U88173-6|AAM15575.1| 1282|Caenorhabditis elegans Hypothetical
           protein F46F11.9b protein.
          Length = 1282

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 25/117 (21%), Positives = 48/117 (41%)
 Frame = -2

Query: 650 MTSELNEQSVRRAVEPCPNLSVATVENFIMTLKKRLKCRVKLMHELQDLESGKISPPKGS 471
           MT+++  + +RR V  CP LS +     + T+   L   +   H  + +E      PK  
Sbjct: 572 MTTDIASECIRRLVAVCPKLSPSLQTERLRTIVNALD--IYFPHRNEPVEM-LTDIPKVE 628

Query: 470 LPPSMRLAGSLTQWQSVGWPEYSQAPSTAFLVTEGLVSANDLLYRAIITRQSAKLVA 300
           +     + G    W  +   E+    S  ++  E   +A+  L+ A    +  +LV+
Sbjct: 629 METVKAIYGERPLWNEIDENEHQSVSSDGWITVER--AAHHALFGASAPYRGMQLVS 683


>U88173-5|AAM15574.1| 1280|Caenorhabditis elegans Hypothetical
           protein F46F11.9a protein.
          Length = 1280

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 25/117 (21%), Positives = 48/117 (41%)
 Frame = -2

Query: 650 MTSELNEQSVRRAVEPCPNLSVATVENFIMTLKKRLKCRVKLMHELQDLESGKISPPKGS 471
           MT+++  + +RR V  CP LS +     + T+   L   +   H  + +E      PK  
Sbjct: 570 MTTDIASECIRRLVAVCPKLSPSLQTERLRTIVNALD--IYFPHRNEPVEM-LTDIPKVE 626

Query: 470 LPPSMRLAGSLTQWQSVGWPEYSQAPSTAFLVTEGLVSANDLLYRAIITRQSAKLVA 300
           +     + G    W  +   E+    S  ++  E   +A+  L+ A    +  +LV+
Sbjct: 627 METVKAIYGERPLWNEIDENEHQSVSSDGWITVER--AAHHALFGASAPYRGMQLVS 681


>Z81576-3|CAB04641.1|  534|Caenorhabditis elegans Hypothetical
           protein R10E8.4 protein.
          Length = 534

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = -2

Query: 677 AQRMCGIDFMTSELNE-QSVRRAVEPCPNLSVATVENFIMTL 555
           A+R+C  DFM S L   +    +V  C +LS+ T  + + TL
Sbjct: 73  AERICSGDFMRSSLEHFRQFLSSVHVCSSLSITTGSSSLNTL 114


>AL032630-2|CAA21559.1|  217|Caenorhabditis elegans Hypothetical
           protein Y62H9A.2 protein.
          Length = 217

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +1

Query: 610 TALLTDCSFNSEVIKSIPHILC 675
           TAL  +C    E +KS+ HILC
Sbjct: 62  TALRAECELTIERVKSLDHILC 83


>Z81533-14|CAB04331.2|  707|Caenorhabditis elegans Hypothetical
           protein F36G9.12 protein.
          Length = 707

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 4/33 (12%)
 Frame = -1

Query: 468 ASFYASSRFFDSVAVCWLA*VQ----SGPINSF 382
           A++Y  SRFF ++AV W+         GPIN+F
Sbjct: 562 ATYYNFSRFFWAIAVSWVIVANHMGWGGPINNF 594


>Z81146-5|CAB03522.3|  699|Caenorhabditis elegans Hypothetical
           protein K10D11.3 protein.
          Length = 699

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 12/41 (29%), Positives = 22/41 (53%)
 Frame = -2

Query: 353 NDLLYRAIITRQSAKLVALVALRSDYPKSVPIFSLTLHWNG 231
           +++LY   +T  +     +VA  S YP   P+  +TL ++G
Sbjct: 363 DEMLYENSVTITAETRATIVAFPSTYPDFTPLLRITLVFDG 403


>AC024824-3|AAK85501.1|  543|Caenorhabditis elegans Hypothetical
           protein Y55B1BR.1 protein.
          Length = 543

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = -2

Query: 635 NEQSVRRAVE-PCPNLSVATVENFIMTLKKRLKCRVKL 525
           N   +R A E P P+LS A+ E F   L K  KC+  L
Sbjct: 185 NHARLRVAQEVPVPDLSQASEEEFYTNLAKEWKCQATL 222


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,125,511
Number of Sequences: 27780
Number of extensions: 339931
Number of successful extensions: 677
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 653
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 677
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1956310428
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)