Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_pT_F18
(889 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z77660-4|CAB01172.1| 501|Caenorhabditis elegans Hypothetical pr... 33 0.27
U41554-1|AAA83296.2| 556|Caenorhabditis elegans Hypothetical pr... 33 0.27
Z82269-7|CAB05204.2| 786|Caenorhabditis elegans Hypothetical pr... 32 0.48
AL021488-8|CAJ43919.1| 786|Caenorhabditis elegans Hypothetical ... 32 0.48
U40946-3|AAO91681.1| 851|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z81476-2|CAB03918.1| 1469|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical p... 30 2.5
Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical p... 30 2.5
Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical p... 30 2.5
Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z81066-5|CAB02969.1| 777|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z36719-1|CAA85311.2| 576|Caenorhabditis elegans Hypothetical pr... 29 4.4
U53154-11|AAC25848.1| 390|Caenorhabditis elegans Hypothetical p... 29 4.4
Z68301-9|CAA92628.1| 456|Caenorhabditis elegans Hypothetical pr... 29 5.9
Z68299-8|CAA92615.1| 456|Caenorhabditis elegans Hypothetical pr... 29 5.9
Z70309-10|CAA94361.2| 324|Caenorhabditis elegans Hypothetical p... 28 7.8
U64834-2|AAB04823.2| 1145|Caenorhabditis elegans Hypothetical pr... 28 7.8
AF014939-4|AAB63932.1| 1277|Caenorhabditis elegans Hypothetical ... 28 7.8
>Z77660-4|CAB01172.1| 501|Caenorhabditis elegans Hypothetical
protein F38H4.4 protein.
Length = 501
Score = 33.1 bits (72), Expect = 0.27
Identities = 25/83 (30%), Positives = 42/83 (50%)
Frame = -2
Query: 552 STENWEEIDNLCASFSKDTCIDDEKSKKENDLNQQKCTNLKKGRKNKNDLTTQDQSLSIQ 373
+++ ++ D L S SK DEKS D+ +K + K+G+K + +D
Sbjct: 124 ASKETDKDDKLQKSKSKTKL--DEKSDNNKDIKDEKKDDKKEGKKEEKKDEKKDDD---G 178
Query: 372 NKSTKKREFTLTGLYKRLLDKDA 304
N KK+++ GL KR +D+DA
Sbjct: 179 NTEEKKQKW--LGLAKRFVDEDA 199
>U41554-1|AAA83296.2| 556|Caenorhabditis elegans Hypothetical
protein F57C12.2 protein.
Length = 556
Score = 33.1 bits (72), Expect = 0.27
Identities = 31/120 (25%), Positives = 59/120 (49%)
Frame = -2
Query: 744 SFDYKILLAECNDAGILLPSDLLCIDSLIGFRKILKTTQKSLPLKMNTSKDDSASELLWP 565
++ K L+ + N+A + + + I L G + LK +++L ++ SE P
Sbjct: 24 NYTQKALIQKYNEANLKVENQKKSITQLHGAIQKLKMEKQNLETQL--------SEKNSP 75
Query: 564 ELDVSTENWEEIDNLCASFSKDTCIDDEKSKKENDLNQQKCTNLKKGRKNKNDLTTQDQS 385
+ TEN ++ T I+++K K+ N LN+ K T LK+ ++N N L+ ++S
Sbjct: 76 KTPNVTENMWSLEYESKLSDAKTKIENQK-KEINKLNE-KVTQLKEEQQNSNQLSKNNES 133
>Z82269-7|CAB05204.2| 786|Caenorhabditis elegans Hypothetical
protein F52G2.1b protein.
Length = 786
Score = 32.3 bits (70), Expect = 0.48
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = -2
Query: 561 LDVSTENWEEIDNLCASFSKDTCIDDE-KSKKENDLNQQKCTNLKKGRKNKNDLTTQDQS 385
+++STENW + + FSK+ + KS +E + QK + +NK+DL+ Q S
Sbjct: 1 MEISTENWCKKPKNRSIFSKNISFQKQNKSTEEPPSSVQKLLASLQQAQNKSDLSEQ-PS 59
Query: 384 LSIQNKSTKKRE 349
S K+ K+++
Sbjct: 60 TSKPKKNEKRKK 71
>AL021488-8|CAJ43919.1| 786|Caenorhabditis elegans Hypothetical
protein F52G2.1b protein.
Length = 786
Score = 32.3 bits (70), Expect = 0.48
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = -2
Query: 561 LDVSTENWEEIDNLCASFSKDTCIDDE-KSKKENDLNQQKCTNLKKGRKNKNDLTTQDQS 385
+++STENW + + FSK+ + KS +E + QK + +NK+DL+ Q S
Sbjct: 1 MEISTENWCKKPKNRSIFSKNISFQKQNKSTEEPPSSVQKLLASLQQAQNKSDLSEQ-PS 59
Query: 384 LSIQNKSTKKRE 349
S K+ K+++
Sbjct: 60 TSKPKKNEKRKK 71
>U40946-3|AAO91681.1| 851|Caenorhabditis elegans Hypothetical
protein W05H9.2 protein.
Length = 851
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = -2
Query: 585 ASELLWPELDVSTENWEEIDNLCASFSK-DTCIDDEKSKK 469
A+ELLWP++D ++ +CA S D +D EK K+
Sbjct: 542 AAELLWPKIDGVMFQLNKVPGICAFVSNFDDHVDREKVKE 581
>Z81476-2|CAB03918.1| 1469|Caenorhabditis elegans Hypothetical
protein C25F9.2 protein.
Length = 1469
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/24 (58%), Positives = 19/24 (79%), Gaps = 1/24 (4%)
Frame = -2
Query: 765 LVAHNGNSFDYKILLAECN-DAGI 697
+VAHNG S+D+ +LLAE + AGI
Sbjct: 711 IVAHNGGSYDHVMLLAELDRQAGI 734
>Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical protein
F07A11.6e protein.
Length = 2101
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/49 (28%), Positives = 23/49 (46%)
Frame = -2
Query: 498 TCIDDEKSKKENDLNQQKCTNLKKGRKNKNDLTTQDQSLSIQNKSTKKR 352
T DDE +++QQ+ T ++ RK + LT + K+ KR
Sbjct: 990 TSSDDEDHNDAGEIHQQRLTEDRENRKRQKSLTAYSSDEQGERKNVPKR 1038
>Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical protein
F07A11.6c protein.
Length = 2392
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/49 (28%), Positives = 23/49 (46%)
Frame = -2
Query: 498 TCIDDEKSKKENDLNQQKCTNLKKGRKNKNDLTTQDQSLSIQNKSTKKR 352
T DDE +++QQ+ T ++ RK + LT + K+ KR
Sbjct: 1281 TSSDDEDHNDAGEIHQQRLTEDRENRKRQKSLTAYSSDEQGERKNVPKR 1329
>Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical protein
F07A11.6b protein.
Length = 2407
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/49 (28%), Positives = 23/49 (46%)
Frame = -2
Query: 498 TCIDDEKSKKENDLNQQKCTNLKKGRKNKNDLTTQDQSLSIQNKSTKKR 352
T DDE +++QQ+ T ++ RK + LT + K+ KR
Sbjct: 1296 TSSDDEDHNDAGEIHQQRLTEDRENRKRQKSLTAYSSDEQGERKNVPKR 1344
>Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical protein
F07A11.6a protein.
Length = 2211
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/49 (28%), Positives = 23/49 (46%)
Frame = -2
Query: 498 TCIDDEKSKKENDLNQQKCTNLKKGRKNKNDLTTQDQSLSIQNKSTKKR 352
T DDE +++QQ+ T ++ RK + LT + K+ KR
Sbjct: 1296 TSSDDEDHNDAGEIHQQRLTEDRENRKRQKSLTAYSSDEQGERKNVPKR 1344
>Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical
protein F07A11.6e protein.
Length = 2101
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/49 (28%), Positives = 23/49 (46%)
Frame = -2
Query: 498 TCIDDEKSKKENDLNQQKCTNLKKGRKNKNDLTTQDQSLSIQNKSTKKR 352
T DDE +++QQ+ T ++ RK + LT + K+ KR
Sbjct: 990 TSSDDEDHNDAGEIHQQRLTEDRENRKRQKSLTAYSSDEQGERKNVPKR 1038
>Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical
protein F07A11.6c protein.
Length = 2392
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/49 (28%), Positives = 23/49 (46%)
Frame = -2
Query: 498 TCIDDEKSKKENDLNQQKCTNLKKGRKNKNDLTTQDQSLSIQNKSTKKR 352
T DDE +++QQ+ T ++ RK + LT + K+ KR
Sbjct: 1281 TSSDDEDHNDAGEIHQQRLTEDRENRKRQKSLTAYSSDEQGERKNVPKR 1329
>Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical
protein F07A11.6b protein.
Length = 2407
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/49 (28%), Positives = 23/49 (46%)
Frame = -2
Query: 498 TCIDDEKSKKENDLNQQKCTNLKKGRKNKNDLTTQDQSLSIQNKSTKKR 352
T DDE +++QQ+ T ++ RK + LT + K+ KR
Sbjct: 1296 TSSDDEDHNDAGEIHQQRLTEDRENRKRQKSLTAYSSDEQGERKNVPKR 1344
>Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical protein
F07A11.6a protein.
Length = 2211
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/49 (28%), Positives = 23/49 (46%)
Frame = -2
Query: 498 TCIDDEKSKKENDLNQQKCTNLKKGRKNKNDLTTQDQSLSIQNKSTKKR 352
T DDE +++QQ+ T ++ RK + LT + K+ KR
Sbjct: 1296 TSSDDEDHNDAGEIHQQRLTEDRENRKRQKSLTAYSSDEQGERKNVPKR 1344
>Z81066-5|CAB02969.1| 777|Caenorhabditis elegans Hypothetical
protein F17B5.1a protein.
Length = 777
Score = 29.5 bits (63), Expect = 3.4
Identities = 23/73 (31%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
Frame = -2
Query: 840 KNAPTFKQRANAIVSFLNELPKPICLVAHNGNSFDYKILLA--ECN-DAGILLPSDLLCI 670
K +FK R V FLN + I ++ + F YK+ A C+ D I L L
Sbjct: 111 KKIASFKGRQQKAVGFLNSGLEEIRILTSPNDKFCYKVKNASWRCSVDNSIDLQKIKLIC 170
Query: 669 DSLIGFRKILKTT 631
+ LIG K ++ T
Sbjct: 171 EKLIGLEKKMEVT 183
>Z36719-1|CAA85311.2| 576|Caenorhabditis elegans Hypothetical
protein C06C3.3 protein.
Length = 576
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/41 (29%), Positives = 27/41 (65%)
Frame = -2
Query: 477 SKKENDLNQQKCTNLKKGRKNKNDLTTQDQSLSIQNKSTKK 355
++ ++ +++K N++K ++KND + QD+S I+ K +K
Sbjct: 365 TRNSDETDRRKPENVEKTVESKNDRSVQDKSEKIEKKVPEK 405
>U53154-11|AAC25848.1| 390|Caenorhabditis elegans Hypothetical
protein C33G8.2 protein.
Length = 390
Score = 29.1 bits (62), Expect = 4.4
Identities = 14/44 (31%), Positives = 27/44 (61%)
Frame = -2
Query: 486 DEKSKKENDLNQQKCTNLKKGRKNKNDLTTQDQSLSIQNKSTKK 355
D+K KK+++ ++K + KK K K+D +D++ ++K KK
Sbjct: 182 DKKKKKDDNDEEEKEKDKKKKDKKKDDDDDEDENDKKKDKKKKK 225
>Z68301-9|CAA92628.1| 456|Caenorhabditis elegans Hypothetical
protein T04B2.5 protein.
Length = 456
Score = 28.7 bits (61), Expect = 5.9
Identities = 14/59 (23%), Positives = 27/59 (45%)
Frame = -2
Query: 639 KTTQKSLPLKMNTSKDDSASELLWPELDVSTENWEEIDNLCASFSKDTCIDDEKSKKEN 463
+ + K + ++++ D +++W L TEN EID L K E+ ++ N
Sbjct: 395 RLSPKGISVRIDQIDDSKLMDMIWTTLIYLTENVHEIDQLGEMIYKLKSDPTERKRRSN 453
>Z68299-8|CAA92615.1| 456|Caenorhabditis elegans Hypothetical
protein T04B2.5 protein.
Length = 456
Score = 28.7 bits (61), Expect = 5.9
Identities = 14/59 (23%), Positives = 27/59 (45%)
Frame = -2
Query: 639 KTTQKSLPLKMNTSKDDSASELLWPELDVSTENWEEIDNLCASFSKDTCIDDEKSKKEN 463
+ + K + ++++ D +++W L TEN EID L K E+ ++ N
Sbjct: 395 RLSPKGISVRIDQIDDSKLMDMIWTTLIYLTENVHEIDQLGEMIYKLKSDPTERKRRSN 453
>Z70309-10|CAA94361.2| 324|Caenorhabditis elegans Hypothetical
protein R102.7 protein.
Length = 324
Score = 28.3 bits (60), Expect = 7.8
Identities = 17/70 (24%), Positives = 35/70 (50%)
Frame = -2
Query: 468 ENDLNQQKCTNLKKGRKNKNDLTTQDQSLSIQNKSTKKREFTLTGLYKRLLDKDAVNAHR 289
E+D+ Q+K R +K TT++ +LS+Q T + + T K+++ K + H+
Sbjct: 249 EDDMTQKKVVKKPSSRPHKKPSTTREHTLSVQ--KTVEDDMT----QKKVVKKPSSRPHK 302
Query: 288 AEDDCVILIE 259
+L++
Sbjct: 303 KPSTMEVLLK 312
>U64834-2|AAB04823.2| 1145|Caenorhabditis elegans Hypothetical
protein F54D11.2 protein.
Length = 1145
Score = 28.3 bits (60), Expect = 7.8
Identities = 27/98 (27%), Positives = 44/98 (44%)
Frame = -2
Query: 642 LKTTQKSLPLKMNTSKDDSASELLWPELDVSTENWEEIDNLCASFSKDTCIDDEKSKKEN 463
+K +KSLP K S E S+ ++ C SFS++ +DDE +++
Sbjct: 1 MKPGRKSLPKKNRASNITEKMPTTSTEAQSSSSKNQD---RCRSFSQELGVDDEPEEQQA 57
Query: 462 DLNQQKCTNLKKGRKNKNDLTTQDQSLSIQNKSTKKRE 349
+ K T KK +K TT++ + KS +K E
Sbjct: 58 PVATPKQT--KKAQKTAK--TTEE--VKSPRKSARKSE 89
>AF014939-4|AAB63932.1| 1277|Caenorhabditis elegans Hypothetical
protein ZC132.5 protein.
Length = 1277
Score = 28.3 bits (60), Expect = 7.8
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = -2
Query: 699 ILLPSDLLCIDSLIGFRKILKTTQKSLPLKMNTS 598
I LPS +L I ++ G+ + K T+ S PL+M+++
Sbjct: 45 IQLPSGILLIKTVFGYTTMGKNTKWSKPLEMDST 78
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,420,522
Number of Sequences: 27780
Number of extensions: 357802
Number of successful extensions: 1231
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1110
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1227
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -