Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_pT_F18
         (889 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    25   0.92 
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    24   1.6  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    23   2.8  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    23   2.8  
DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.              23   3.7  

>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 25.0 bits (52), Expect = 0.92
 Identities = 9/37 (24%), Positives = 19/37 (51%)
 Frame = -2

Query: 495 CIDDEKSKKENDLNQQKCTNLKKGRKNKNDLTTQDQS 385
           C+++ ++    + N Q   N K  +KN N+    +Q+
Sbjct: 414 CVNNNQNDNIQNTNNQNDNNQKNNKKNANNQKNNNQN 450


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = -2

Query: 675  CIDSLIGFRKILKTTQKSLPLKMNTSKDDSASEL 574
            C++ +    KIL+T QK++ L M   + D + E+
Sbjct: 1310 CVEDMKRGNKILRTCQKAVVLSMLLDEVDISMEV 1343


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -2

Query: 336 GLYKRLLDKDAVNAHRAEDDCVI 268
           G +KR + KD   A R E  C+I
Sbjct: 132 GFFKRTVRKDLSYACREEKSCII 154


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -2

Query: 336 GLYKRLLDKDAVNAHRAEDDCVI 268
           G +KR + KD   A R E  C+I
Sbjct: 132 GFFKRTVRKDLSYACREEKSCII 154


>DQ435330-1|ABD92645.1|  132|Apis mellifera OBP13 protein.
          Length = 132

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 9/22 (40%), Positives = 16/22 (72%)
 Frame = -2

Query: 471 KENDLNQQKCTNLKKGRKNKND 406
           +EN ++ +K  ++KKG  +KND
Sbjct: 35  EENGIDLKKADDVKKGIFDKND 56


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 208,484
Number of Sequences: 438
Number of extensions: 4121
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28662543
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)