Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_pT_F17
         (812 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dp...    25   2.1  
AY534995-1|AAT07393.1|  461|Anopheles gambiae XK-related protein.      25   3.7  
L10440-1|AAA29360.1|  154|Anopheles gambiae transposase protein.       24   4.8  
AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin s...    24   6.4  

>AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dpp
           protein.
          Length = 474

 Score = 25.4 bits (53), Expect = 2.1
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = +2

Query: 356 VRTTKGLIENHENIRMCPSQPPLVNTLP 439
           ++  KG IE  E    CP QP    T+P
Sbjct: 55  LKKRKGAIEELERALSCPGQPSKCVTIP 82


>AY534995-1|AAT07393.1|  461|Anopheles gambiae XK-related protein.
          Length = 461

 Score = 24.6 bits (51), Expect = 3.7
 Identities = 14/61 (22%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
 Frame = +2

Query: 440 SLRVFTLLMPGFLIVTSNLRVKL----KSFLPKLNICITFEALPMIPLCCSRW*STDIGH 607
           +L +  L +PG +    NL + L    ++   +   C T   + ++P CC  W S  + +
Sbjct: 139 ALTLVGLFVPGIITSLLNLLMYLDDARRNRRDRQPCCSTLLCVVVVPFCCRYWHSLRLSY 198

Query: 608 S 610
           +
Sbjct: 199 A 199


>L10440-1|AAA29360.1|  154|Anopheles gambiae transposase protein.
          Length = 154

 Score = 24.2 bits (50), Expect = 4.8
 Identities = 13/46 (28%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = -3

Query: 471 PGINKVKT-RSDGKVFTSGGWDGHIRIFSWFSMRPLVVLTEHKQAI 337
           P   + KT +S GKV  S  WD H   F  +  +  ++ +++ +A+
Sbjct: 58  PAPKRGKTQKSAGKVMASVFWDAHGIFFIEYLQKGKIINSDYYKAL 103


>AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin
           subunit AgBnu protein.
          Length = 803

 Score = 23.8 bits (49), Expect = 6.4
 Identities = 10/31 (32%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
 Frame = -3

Query: 693 CLLAGYEAGWLL--LWDLNTNKCISKLQVLE 607
           CL A  +  W    L+D+  ++C++K ++LE
Sbjct: 42  CLDADKDCAWCTDELYDMRKSRCMTKHELLE 72


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 815,636
Number of Sequences: 2352
Number of extensions: 16792
Number of successful extensions: 20
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 86071221
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)