Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_pT_F08
(826 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0873 - 32372143-32372287,32372678-32372754,32372863-323730... 102 4e-22
09_04_0359 + 16941904-16942110,16943636-16943785,16944084-169442... 91 1e-18
07_03_1385 + 26189034-26189294,26189427-26189636,26191016-261910... 88 9e-18
03_03_0128 - 14677152-14677296,14677381-14677457,14679836-14680312 86 3e-17
03_05_1098 - 30395704-30395837,30396644-30396751,30396933-303971... 62 7e-10
06_01_0751 + 5630036-5630233,5630623-5630718,5631420-5631629,563... 61 9e-10
08_02_1381 - 26551920-26552053,26552963-26553070,26553154-265533... 44 2e-04
09_04_0676 - 19383757-19383890,19384308-19384415,19384493-193846... 36 0.030
08_02_0963 + 23068851-23069042,23069262-23069414,23069590-230696... 36 0.039
01_03_0103 - 12567986-12568141,12568307-12568442,12568751-125688... 31 1.5
11_06_0689 - 26294961-26294976,26295271-26295414,26295506-262959... 29 3.4
01_07_0226 + 42130300-42131430,42131530-42131715,42133244-421333... 29 4.5
01_01_0608 - 4513604-4513701,4513790-4513919,4514027-4514116,451... 29 5.9
08_01_0889 + 8753877-8754236,8754995-8755054,8755174-8755250,875... 28 7.8
02_02_0062 - 6476019-6476419,6476624-6476960,6476985-6479657 28 7.8
>02_05_0873 -
32372143-32372287,32372678-32372754,32372863-32373072,
32374645-32374869
Length = 218
Score = 102 bits (244), Expect = 4e-22
Identities = 59/191 (30%), Positives = 104/191 (54%), Gaps = 4/191 (2%)
Frame = -3
Query: 815 DAIMWSLAPNTHKCLKEELHANVLVAGEYDVT----EIQGQRVDYIIKDSKGHILSQKDT 648
+A+ L + KC+ EE+ +NV+V +Y + + + G+ L +
Sbjct: 30 EAVWLDLPQSGTKCVSEEIQSNVVVLADYALMYESHPSSHPTIAVKVTSPYGNTLHHNEN 89
Query: 647 VTKGKFSFVTENYDMFEVCFISKVPSERRGIPHQVSLDIKIGIEAKTYEGIGEAAKLKPM 468
T G+F+F T + CF + S +G ++LD KIGI AK ++ I + K++ +
Sbjct: 90 ATVGQFAFTTSEAGNYLACFW--IDSAEKGSGISINLDWKIGIAAKDWDVIAKKEKIEGV 147
Query: 467 EVELKRLEDLSEAIVQDFTLMRKREEEMRDTXESTNNRVLFFSIFSMACLLGLATWQVLY 288
E+EL++LE ++I Q+ ++ RE EMR E TN RV +FSI S++ + ++ Q+ +
Sbjct: 148 ELELRKLEVAVQSIHQNMIYLKAREAEMRTVSEKTNARVAWFSILSLSVCIVVSILQLWH 207
Query: 287 LRRFFKAKKLI 255
L+ +F+ KKLI
Sbjct: 208 LQGYFQKKKLI 218
>09_04_0359 +
16941904-16942110,16943636-16943785,16944084-16944293,
16944376-16944452,16944554-16944698
Length = 262
Score = 90.6 bits (215), Expect = 1e-18
Identities = 47/140 (33%), Positives = 84/140 (60%)
Frame = -3
Query: 674 GHILSQKDTVTKGKFSFVTENYDMFEVCFISKVPSERRGIPHQVSLDIKIGIEAKTYEGI 495
G I+ K V+ G+FSF T + CF + ++R + +++LD ++GI K ++ +
Sbjct: 125 GDIVHHKQKVSTGQFSFTTAEAGNYLACFSADGRNKRLVV--KLNLDWRVGIATKDWDSV 182
Query: 494 GEAAKLKPMEVELKRLEDLSEAIVQDFTLMRKREEEMRDTXESTNNRVLFFSIFSMACLL 315
+ KL+ +E+EL +LE +AI ++ L+R +E MRDT E TN R + SI S+ +
Sbjct: 183 AKKEKLEGVELELVKLETSVQAIHENLLLLRSKEANMRDTSEKTNARATWLSIISLIVCI 242
Query: 314 GLATWQVLYLRRFFKAKKLI 255
++ Q+ +L+++F+ KKLI
Sbjct: 243 IVSVLQLWHLQQYFRKKKLI 262
Score = 35.1 bits (77), Expect = 0.068
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = -3
Query: 821 GTDAIMWSLAPNTHKCLKEELHANVLVAGEYDV 723
G A+ + P+ KC+ EE+ +NV+V G+Y V
Sbjct: 24 GAGAVWLEIPPSATKCVSEEIQSNVVVIGDYSV 56
>07_03_1385 +
26189034-26189294,26189427-26189636,26191016-26191092,
26191196-26191340
Length = 230
Score = 87.8 bits (208), Expect = 9e-18
Identities = 52/196 (26%), Positives = 97/196 (49%), Gaps = 10/196 (5%)
Frame = -3
Query: 812 AIMWSLAPNTHKCLKEELHANVLVAGEYDVTEIQGQRVDYIIKDSK----------GHIL 663
A+ + L KC+ +E+ N +V G+Y V D + DS G+ +
Sbjct: 37 ALRFDLESGHTKCISDEIKVNSMVVGKYHVVGPDPNFPDNPLPDSHRISLRVTSPYGNSV 96
Query: 662 SQKDTVTKGKFSFVTENYDMFEVCFISKVPSERRGIPHQVSLDIKIGIEAKTYEGIGEAA 483
+ V G F+F + CF + P + + D + G+ AK + + +
Sbjct: 97 HYAENVPSGNFAFTATEAGDYLACFWA--PDHKPPVSIGFEFDWRSGVAAKDWSNVAKKG 154
Query: 482 KLKPMEVELKRLEDLSEAIVQDFTLMRKREEEMRDTXESTNNRVLFFSIFSMACLLGLAT 303
++ ME+ELK+LE+ ++I ++ +R+REEEM++ + TN+R+ + S+ L +A
Sbjct: 155 QVDVMEMELKKLEETIKSIHEEMFYLREREEEMQNLNKQTNSRMAWLGFLSLGICLSVAG 214
Query: 302 WQVLYLRRFFKAKKLI 255
Q+ +L+ FF+ KKL+
Sbjct: 215 LQLWHLKTFFERKKLL 230
>03_03_0128 - 14677152-14677296,14677381-14677457,14679836-14680312
Length = 232
Score = 86.2 bits (204), Expect = 3e-17
Identities = 46/153 (30%), Positives = 78/153 (50%)
Frame = -3
Query: 713 QGQRVDYIIKDSKGHILSQKDTVTKGKFSFVTENYDMFEVCFISKVPSERRGIPHQVSLD 534
+ RV + G+ L + V G F+F + CF + P R D
Sbjct: 82 ESHRVSLRVTSPYGNSLHYSENVQSGNFAFTASEAGDYLACFWA--PDHRPTATVGFEFD 139
Query: 533 IKIGIEAKTYEGIGEAAKLKPMEVELKRLEDLSEAIVQDFTLMRKREEEMRDTXESTNNR 354
+ G+ A+ + + + ++ MEVELK+LED +I ++ +R REEEM++ TN+R
Sbjct: 140 WRSGVSARDWTNVAKKGQVDMMEVELKKLEDTINSIHEEMFYLRAREEEMQELNRRTNSR 199
Query: 353 VLFFSIFSMACLLGLATWQVLYLRRFFKAKKLI 255
+ + FS+A L +A Q+ +L+ FF+ KKL+
Sbjct: 200 MAWLGFFSLAICLSVAGLQLWHLKNFFERKKLL 232
>03_05_1098 -
30395704-30395837,30396644-30396751,30396933-30397119,
30398127-30398330
Length = 210
Score = 61.7 bits (143), Expect = 7e-10
Identities = 37/143 (25%), Positives = 65/143 (45%)
Frame = -3
Query: 701 VDYIIKDSKGHILSQKDTVTKGKFSFVTENYDMFEVCFISKVPSERRGIPHQVSLDIKIG 522
+D + G+ + + KF F M++ CF + G P VS I +G
Sbjct: 65 IDLTVTSPGGNTVYTLKGKSGDKFEFKAPRGGMYKFCFHNPY-----GAPETVSFYIHVG 119
Query: 521 IEAKTYEGIGEAAKLKPMEVELKRLEDLSEAIVQDFTLMRKREEEMRDTXESTNNRVLFF 342
+ + L P+ V++ L++ E++ + ++ RE R T EST RV+F+
Sbjct: 120 -HIPNEHNLAKDEHLDPINVKIAELKEALESVTAEQKYLKAREARHRHTNESTRRRVMFY 178
Query: 341 SIFSMACLLGLATWQVLYLRRFF 273
+I +G + QV+Y+RR F
Sbjct: 179 TIAEYLAFMGASALQVVYIRRLF 201
>06_01_0751 +
5630036-5630233,5630623-5630718,5631420-5631629,
5631735-5631811,5632204-5632222,5632304-5632348
Length = 214
Score = 61.3 bits (142), Expect = 9e-10
Identities = 31/98 (31%), Positives = 55/98 (56%)
Frame = -3
Query: 674 GHILSQKDTVTKGKFSFVTENYDMFEVCFISKVPSERRGIPHQVSLDIKIGIEAKTYEGI 495
G+ + + T G+F+F T + CF P + G+ ++LD KIGI AK ++ +
Sbjct: 104 GNTVHHNENATTGQFAFTTSEAGNYLACFWLDSPEKGSGV--SLNLDWKIGIAAKDWDTV 161
Query: 494 GEAAKLKPMEVELKRLEDLSEAIVQDFTLMRKREEEMR 381
+ K++ +E+EL++LE E+I + ++ RE EMR
Sbjct: 162 AKKEKIEGVELELRKLEAAVESIHHNLLYLKAREAEMR 199
Score = 28.7 bits (61), Expect = 5.9
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -3
Query: 815 DAIMWSLAPNTHKCLKEELHANVLVAGEY 729
+A+ L P KC+ EE+ NV+V +Y
Sbjct: 21 EAVWLDLPPTGTKCVSEEIQPNVVVLADY 49
>08_02_1381 -
26551920-26552053,26552963-26553070,26553154-26553340,
26554107-26554316
Length = 212
Score = 43.6 bits (98), Expect = 2e-04
Identities = 30/146 (20%), Positives = 60/146 (41%)
Frame = -3
Query: 701 VDYIIKDSKGHILSQKDTVTKGKFSFVTENYDMFEVCFISKVPSERRGIPHQVSLDIKIG 522
VD ++KD G + T KF F+ + + CF +K P V D+ +G
Sbjct: 67 VDLVVKDPNGAQVRDSRDKTSDKFEFIVQKRGVHRFCFTNKSPYH-----ETVDFDVHVG 121
Query: 521 IEAKTYEGIGEAAKLKPMEVELKRLEDLSEAIVQDFTLMRKREEEMRDTXESTNNRVLFF 342
++ + P+ ++ +L++ I + + + + E+ + R +
Sbjct: 122 -HFSYFDQHAKDEHFAPLFEQIAKLDEALYNIQFEQHWLEAQTDRQAILNENMSRRAVHK 180
Query: 341 SIFSMACLLGLATWQVLYLRRFFKAK 264
++ A L+ + QV LRR F+ K
Sbjct: 181 ALLESAALIAASVIQVYLLRRLFERK 206
>09_04_0676 -
19383757-19383890,19384308-19384415,19384493-19384679,
19384937-19385143
Length = 211
Score = 36.3 bits (80), Expect = 0.030
Identities = 27/146 (18%), Positives = 56/146 (38%)
Frame = -3
Query: 701 VDYIIKDSKGHILSQKDTVTKGKFSFVTENYDMFEVCFISKVPSERRGIPHQVSLDIKIG 522
VD +++D G+ + KF F+ + CF +K P V D+ +
Sbjct: 66 VDLVVRDPNGNQIHDSRDKISDKFEFIVHRRGVHRFCFTNKSPYH-----ETVDFDVLVS 120
Query: 521 IEAKTYEGIGEAAKLKPMEVELKRLEDLSEAIVQDFTLMRKREEEMRDTXESTNNRVLFF 342
Y+ + + ++ +L++ I + + + + E+ + R +
Sbjct: 121 -HFSYYDQHAKDEHFSALFEQIAKLDEALYNIQFEQHWLEAQTDRQAILNENMSRRAVHK 179
Query: 341 SIFSMACLLGLATWQVLYLRRFFKAK 264
+ F A L+ + QV L R F+ K
Sbjct: 180 AFFESAALIAASVVQVYLLHRLFERK 205
>08_02_0963 +
23068851-23069042,23069262-23069414,23069590-23069666,
23069744-23069762,23070182-23070202
Length = 153
Score = 35.9 bits (79), Expect = 0.039
Identities = 23/88 (26%), Positives = 39/88 (44%), Gaps = 12/88 (13%)
Frame = -3
Query: 815 DAIMWSLAPNTHKCLKEELHANVLVAGEYDVTEIQGQRVDYI------------IKDSKG 672
+A+ L+ KC E + +NV+V G+YD+ G I + G
Sbjct: 20 EAVWMELSTTATKCFSERIQSNVVVIGDYDIL-FDGYPTRPILSIQVILGLLLQVTSPYG 78
Query: 671 HILSQKDTVTKGKFSFVTENYDMFEVCF 588
+L ++ V +G+FSF T ++ CF
Sbjct: 79 KVLHHREKVMQGQFSFNTAEPGVYLACF 106
>01_03_0103 -
12567986-12568141,12568307-12568442,12568751-12568824,
12568932-12569175,12569480-12569766,12570618-12571103,
12571348-12571459,12571540-12571745,12573071-12573276,
12573831-12574162,12574284-12574825,12574967-12576308,
12576386-12576457,12578438-12578505,12579011-12580174
Length = 1808
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/48 (27%), Positives = 25/48 (52%)
Frame = +3
Query: 474 LQFCSLPDPFISLCFYADFNI*AYLMWNTSSF*WYFRYKANFKHIIIL 617
L C + S Y+ FN+ + L W + S W+ +N+++I++L
Sbjct: 647 LTLCCFEEDCSSRAIYSGFNLSSSLDWQSYSKRWWMGELSNYEYILVL 694
>11_06_0689 -
26294961-26294976,26295271-26295414,26295506-26295909,
26296112-26296261,26296334-26296497,26296526-26296836,
26296948-26297084,26297276-26297416,26297821-26297867,
26297977-26298072,26298168-26298249,26298332-26298472,
26298607-26298702,26298809-26298877,26298959-26299030,
26299201-26299368,26299577-26299711,26299792-26299958,
26301213-26301369
Length = 898
Score = 29.5 bits (63), Expect = 3.4
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = -3
Query: 788 NTHKCLKEELHANVLVAGEYDVTEIQGQRVDYIIKDSKGHILSQKDTVTKGK 633
+T +KEE+ VLV GE V IQ ++ D + HI K + K
Sbjct: 294 HTSVSMKEEVSTAVLVNGENVVEHIQAKQTDKYFDQQQKHIKDLKSNLATMK 345
>01_07_0226 +
42130300-42131430,42131530-42131715,42133244-42133345,
42133425-42133481,42133563-42133658,42133736-42133828,
42133945-42134064,42134155-42134187,42134266-42134316,
42135129-42135191
Length = 643
Score = 29.1 bits (62), Expect = 4.5
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -3
Query: 644 TKGKFSFVTENYDMFEVCFISKVPSE 567
T+G+F + ENYD++ C VP +
Sbjct: 585 TRGRFRSMKENYDLYVACIDETVPEK 610
>01_01_0608 -
4513604-4513701,4513790-4513919,4514027-4514116,
4514225-4514330,4514442-4514542,4514678-4514773,
4514860-4514959,4515133-4515269,4515563-4515661,
4515740-4515937,4516058-4516235,4516635-4516690,
4516781-4516933,4517248-4517340,4517422-4517523,
4517609-4517650,4517812-4517855,4518087-4518186,
4518323-4518394,4518499-4518621,4519309-4519452
Length = 753
Score = 28.7 bits (61), Expect = 5.9
Identities = 20/96 (20%), Positives = 46/96 (47%), Gaps = 3/96 (3%)
Frame = -3
Query: 623 VTENYDMFEVCFISKVPSERRG---IPHQVSLDIKIGIEAKTYEGIGEAAKLKPMEVELK 453
VT D F+ + V R+G + HQ + +IK E K + + +P+E LK
Sbjct: 341 VTYTSDYFQALYEHAVELIRKGLAYVDHQTAEEIKEYREKK----MNSPWRDRPIEESLK 396
Query: 452 RLEDLSEAIVQDFTLMRKREEEMRDTXESTNNRVLF 345
ED+ ++ + + +++M++ ++ ++ + +
Sbjct: 397 LFEDMRRGLIAEGAATLRMKQDMQNDNKNMSDLIAY 432
>08_01_0889 +
8753877-8754236,8754995-8755054,8755174-8755250,
8755481-8755622,8755736-8755772,8755852-8755921,
8756021-8756212,8756321-8756413,8756545-8756773,
8756861-8756944,8757041-8757192,8757279-8757375,
8757576-8757725,8757813-8757890,8757982-8758104,
8758169-8758315,8758418-8758472,8758807-8758874
Length = 737
Score = 28.3 bits (60), Expect = 7.8
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -2
Query: 330 DGVPLGSGHLASPVPSQV 277
DG PLG G LA P PS +
Sbjct: 385 DGTPLGGGSLAPPFPSPI 402
>02_02_0062 - 6476019-6476419,6476624-6476960,6476985-6479657
Length = 1136
Score = 28.3 bits (60), Expect = 7.8
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = -3
Query: 521 IEAKTYEGIGEAAKLKPMEVELKRLEDLSEAIVQDFTLMRK 399
IE K EGIG LK + +++ RLE + A + ++ K
Sbjct: 507 IEGKIPEGIGNLINLKLLYMDINRLEGIIPASLGKLKMLNK 547
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,490,633
Number of Sequences: 37544
Number of extensions: 334839
Number of successful extensions: 854
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 822
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 850
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2268190812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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