BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_pT_F08
(826 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc... 25 3.7
AJ010299-1|CAA09070.1| 722|Anopheles gambiae stat protein. 25 3.7
AY578808-1|AAT07313.1| 458|Anopheles gambiae saxophone protein. 24 4.9
AY578811-1|AAT07316.1| 565|Anopheles gambiae thickveins protein. 24 6.5
AY193727-1|AAO24698.1| 492|Anopheles gambiae cytochrome P450 pr... 23 8.6
AF487780-1|AAL96667.1| 490|Anopheles gambiae cytochrome P450 CY... 23 8.6
>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
channel alpha1 subunit protein.
Length = 1893
Score = 24.6 bits (51), Expect = 3.7
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = +1
Query: 673 PFESLII*STLCPCISVTSYSPATNT 750
PFE LI+ + C+++ Y+P N+
Sbjct: 114 PFEYLILLTIFANCVALAVYTPFPNS 139
>AJ010299-1|CAA09070.1| 722|Anopheles gambiae stat protein.
Length = 722
Score = 24.6 bits (51), Expect = 3.7
Identities = 34/145 (23%), Positives = 62/145 (42%), Gaps = 5/145 (3%)
Frame = -3
Query: 812 AIMWSLAPNTHKCLKEELHANVLVAGEYDVTEIQGQRVDYI-IKDSKGHIL-SQKDTVTK 639
AIMW+ H +K +L +V D+ ++ D+I + K I+ +Q V K
Sbjct: 244 AIMWNTKDQIHLTMKSQLREHVSQEINSDLWKVMKDVKDFIKLLLHKAFIVENQPPQVMK 303
Query: 638 GKFSFVTENYDMFEVCFISKVPSERRGIPHQVSLDIKIGIEAKTYEGIGEAAKLKPMEVE 459
F + + I K+ G P +V++ I +A+ + AA E+E
Sbjct: 304 MNTRFCASVRLLIDNALIMKI-----GNP-KVTVSIISETQAQQIQSTNAAADFSAGEIE 357
Query: 458 --LKRLE-DLSEAIVQDFTLMRKRE 393
+ L+ LS + +F+ MR ++
Sbjct: 358 NNIGNLQYQLSNKFLANFSNMRLKK 382
>AY578808-1|AAT07313.1| 458|Anopheles gambiae saxophone protein.
Length = 458
Score = 24.2 bits (50), Expect = 4.9
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -2
Query: 669 HLITERYSNKGKVLIRHREL 610
HL TE + +GK I HR+L
Sbjct: 261 HLHTEIFGTEGKPAIAHRDL 280
>AY578811-1|AAT07316.1| 565|Anopheles gambiae thickveins protein.
Length = 565
Score = 23.8 bits (49), Expect = 6.5
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -2
Query: 672 AHLITERYSNKGKVLIRHREL 610
AHL TE + GK I HR++
Sbjct: 368 AHLHTEIFGTPGKPSIAHRDI 388
>AY193727-1|AAO24698.1| 492|Anopheles gambiae cytochrome P450
protein.
Length = 492
Score = 23.4 bits (48), Expect = 8.6
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = +3
Query: 117 PVLRKNCTL*YKLP 158
P+L + CT+ YK+P
Sbjct: 366 PILNRECTIDYKVP 379
>AF487780-1|AAL96667.1| 490|Anopheles gambiae cytochrome P450
CYP6Z2 protein protein.
Length = 490
Score = 23.4 bits (48), Expect = 8.6
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = +3
Query: 117 PVLRKNCTL*YKLP 158
P+L + CT+ YK+P
Sbjct: 366 PILNRECTIDYKVP 379
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 751,270
Number of Sequences: 2352
Number of extensions: 13907
Number of successful extensions: 20
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 87734433
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -