Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_pT_F05
(932 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78019-5|CAB01455.1| 305|Caenorhabditis elegans Hypothetical pr... 78 1e-14
U21302-2|AAA92287.1| 305|Caenorhabditis elegans RNP-1 protein. 78 1e-14
U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene... 49 5e-06
U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprote... 49 5e-06
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 47 2e-05
Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical pr... 43 4e-04
DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding p... 43 4e-04
U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein (sp... 42 5e-04
U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein (spl... 42 5e-04
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 40 0.003
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 40 0.003
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 40 0.003
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 38 0.008
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 38 0.008
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 38 0.008
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 38 0.008
Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical pr... 38 0.010
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 38 0.010
AC006672-4|AAK84542.1| 151|Caenorhabditis elegans Hypothetical ... 38 0.010
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 36 0.031
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 36 0.041
Z54236-5|CAA90980.1| 386|Caenorhabditis elegans Hypothetical pr... 36 0.055
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 35 0.072
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 35 0.072
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 35 0.072
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 35 0.072
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 35 0.072
AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen prot... 35 0.072
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 35 0.096
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 35 0.096
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 35 0.096
Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical pr... 34 0.13
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 33 0.29
U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna b... 33 0.29
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 33 0.39
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 33 0.39
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 33 0.39
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 33 0.39
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 33 0.39
AF077533-3|AAC64626.1| 1023|Caenorhabditis elegans Hypothetical ... 32 0.51
Z81532-7|CAJ34990.1| 363|Caenorhabditis elegans Hypothetical pr... 32 0.67
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 32 0.67
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 32 0.67
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 32 0.67
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 32 0.67
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 32 0.67
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 32 0.67
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 32 0.67
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 31 0.89
U39644-7|AAO44908.1| 307|Caenorhabditis elegans Collagen protei... 31 0.89
AF016670-8|AAB66101.1| 783|Caenorhabditis elegans Hypothetical ... 31 0.89
Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical pr... 31 1.2
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 31 1.2
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 31 1.2
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 31 1.2
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 31 1.2
AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical ... 31 1.2
AF022985-9|AAB69960.1| 314|Caenorhabditis elegans Collagen prot... 31 1.2
Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical pr... 31 1.6
Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical pr... 31 1.6
U23515-13|AAK21453.1| 823|Caenorhabditis elegans Hypothetical p... 31 1.6
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z79694-6|CAB01958.1| 316|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z49069-2|CAA88865.1| 333|Caenorhabditis elegans Hypothetical pr... 30 2.1
U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna b... 30 2.1
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 30 2.1
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 30 2.1
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 30 2.1
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 30 2.1
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 30 2.1
AF098993-1|AAC67471.2| 367|Caenorhabditis elegans Zinc finger t... 30 2.1
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 30 2.1
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 30 2.7
Z49938-3|CAA90188.1| 306|Caenorhabditis elegans Hypothetical pr... 30 2.7
U41553-3|AAA83293.1| 289|Caenorhabditis elegans Collagen protei... 30 2.7
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 30 2.7
M25481-1|AAA27987.1| 283|Caenorhabditis elegans collagen protein. 30 2.7
CU457737-9|CAM36330.1| 281|Caenorhabditis elegans Hypothetical ... 30 2.7
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 30 2.7
Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 29 3.6
AF100656-7|AAF99964.2| 615|Caenorhabditis elegans Hypothetical ... 29 3.6
AF022985-12|AAB69959.1| 319|Caenorhabditis elegans Collagen pro... 29 3.6
Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z67738-4|CAJ43444.1| 279|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z67738-3|CAA91544.2| 332|Caenorhabditis elegans Hypothetical pr... 29 4.8
U50312-9|AAA92325.1| 294|Caenorhabditis elegans Collagen protei... 29 4.8
U50312-7|AAA92323.2| 306|Caenorhabditis elegans Collagen protei... 29 4.8
AF016687-1|AAC48094.2| 315|Caenorhabditis elegans Dumpy : short... 29 4.8
AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily a... 29 4.8
Z81567-3|CAB04587.1| 301|Caenorhabditis elegans Hypothetical pr... 29 6.3
Z68297-6|CAE45045.1| 302|Caenorhabditis elegans Hypothetical pr... 29 6.3
Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical pr... 29 6.3
U80847-7|AAO91744.1| 778|Caenorhabditis elegans Hypothetical pr... 29 6.3
U80847-6|AAK68190.1| 796|Caenorhabditis elegans Hypothetical pr... 29 6.3
U80847-5|AAK68189.1| 793|Caenorhabditis elegans Hypothetical pr... 29 6.3
AL032625-2|CAB63351.1| 138|Caenorhabditis elegans Hypothetical ... 29 6.3
AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen pro... 29 6.3
Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical pr... 28 8.3
Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical pr... 28 8.3
Z54238-5|CAA90997.1| 299|Caenorhabditis elegans Hypothetical pr... 28 8.3
Z54238-3|CAA90995.1| 299|Caenorhabditis elegans Hypothetical pr... 28 8.3
Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical pr... 28 8.3
U70849-7|AAF99925.2| 332|Caenorhabditis elegans Collagen protei... 28 8.3
U41624-5|AAF99941.1| 314|Caenorhabditis elegans Collagen protei... 28 8.3
L15419-1|AAA17726.1| 308|Caenorhabditis elegans col-40 collagen... 28 8.3
AY347576-1|AAP97870.1| 299|Caenorhabditis elegans COLlagen stru... 28 8.3
AY347574-1|AAP97868.1| 299|Caenorhabditis elegans COLlagen stru... 28 8.3
AL032654-7|CAA21719.1| 219|Caenorhabditis elegans Hypothetical ... 28 8.3
AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen prot... 28 8.3
AC006770-1|AAF60594.1| 1365|Caenorhabditis elegans Hypothetical ... 28 8.3
>Z78019-5|CAB01455.1| 305|Caenorhabditis elegans Hypothetical
protein ZK863.7 protein.
Length = 305
Score = 77.8 bits (183), Expect = 1e-14
Identities = 35/91 (38%), Positives = 57/91 (62%)
Frame = -3
Query: 921 DQTRAPEVRELFQKFGTVXECDIVRXYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLS 742
D + +++++FQ F V ECDIV+ Y FVH++ DV+ I L G +DG+ + ++ S
Sbjct: 12 DNVDSNKLKQVFQPFCKVTECDIVKNYAFVHIE-EDDVDPIITRLTGYTIDGKVVNIKKS 70
Query: 741 TSRVRQRPGMGDPEQCYRCGRGGHWSKECPK 649
TS++R PGM P +C+RC H + +CP+
Sbjct: 71 TSKLRPTPGM--PNRCFRCQSDEHRTPQCPQ 99
>U21302-2|AAA92287.1| 305|Caenorhabditis elegans RNP-1 protein.
Length = 305
Score = 77.8 bits (183), Expect = 1e-14
Identities = 35/91 (38%), Positives = 57/91 (62%)
Frame = -3
Query: 921 DQTRAPEVRELFQKFGTVXECDIVRXYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLS 742
D + +++++FQ F V ECDIV+ Y FVH++ DV+ I L G +DG+ + ++ S
Sbjct: 12 DNVDSNKLKQVFQPFCKVTECDIVKNYAFVHIE-EDDVDPIITRLTGYTIDGKVVNIKKS 70
Query: 741 TSRVRQRPGMGDPEQCYRCGRGGHWSKECPK 649
TS++R PGM P +C+RC H + +CP+
Sbjct: 71 TSKLRPTPGM--PNRCFRCQSDEHRTPQCPQ 99
>U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene on
x protein 1 protein.
Length = 415
Score = 48.8 bits (111), Expect = 5e-06
Identities = 22/70 (31%), Positives = 44/70 (62%), Gaps = 6/70 (8%)
Frame = -3
Query: 912 RAPEVRELFQKFGTVXECDIV------RXYGFVHLDATGDVNDAIKELNGMMVDGQPMKV 751
R P+++ +F+KFG V + +I+ + +GFV ++ D A +EL+G M++G+ ++V
Sbjct: 165 RDPDLKTMFEKFGVVSDVEIIFNERGSKGFGFVTMERPQDAERARQELHGSMIEGRKIEV 224
Query: 750 QLSTSRVRQR 721
+T+RV +
Sbjct: 225 NCATARVHSK 234
>U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprotein
protein.
Length = 415
Score = 48.8 bits (111), Expect = 5e-06
Identities = 22/70 (31%), Positives = 44/70 (62%), Gaps = 6/70 (8%)
Frame = -3
Query: 912 RAPEVRELFQKFGTVXECDIV------RXYGFVHLDATGDVNDAIKELNGMMVDGQPMKV 751
R P+++ +F+KFG V + +I+ + +GFV ++ D A +EL+G M++G+ ++V
Sbjct: 165 RDPDLKTMFEKFGVVSDVEIIFNERGSKGFGFVTMERPQDAERARQELHGSMIEGRKIEV 224
Query: 750 QLSTSRVRQR 721
+T+RV +
Sbjct: 225 NCATARVHSK 234
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 46.8 bits (106), Expect = 2e-05
Identities = 33/105 (31%), Positives = 48/105 (45%), Gaps = 3/105 (2%)
Frame = -3
Query: 903 EVRELFQKFGTVXECDIVRX---YGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTSR 733
E+ E+F +FG + + + R + FV D D DA++ L+G + G +V+LST +
Sbjct: 18 ELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDGSRICGVRARVELSTGQ 77
Query: 732 VRQRPGMGDPEQCYRCGRGGHWSKECPKALGPDRNGFRDRAFGRD 598
R G G GRGG P R+ R R GRD
Sbjct: 78 RRGGGGRGGGFG----GRGGGGRDRSPYRGDRGRSRSRSRDRGRD 118
>Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical
protein R74.5a protein.
Length = 404
Score = 42.7 bits (96), Expect = 4e-04
Identities = 21/70 (30%), Positives = 39/70 (55%), Gaps = 6/70 (8%)
Frame = -3
Query: 912 RAPEVRELFQKFGTVXECDIV------RXYGFVHLDATGDVNDAIKELNGMMVDGQPMKV 751
R P++ +F+K G V + +I+ + +GFV + D + A E NG ++G+ ++V
Sbjct: 112 REPDLTAMFEKVGPVVDVEIIFNERGSKGFGFVTMQNPDDADRARAEFNGTTIEGRRVEV 171
Query: 750 QLSTSRVRQR 721
L+T RV +
Sbjct: 172 NLATQRVHNK 181
>DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding
protein ASD-1 protein.
Length = 404
Score = 42.7 bits (96), Expect = 4e-04
Identities = 21/70 (30%), Positives = 39/70 (55%), Gaps = 6/70 (8%)
Frame = -3
Query: 912 RAPEVRELFQKFGTVXECDIV------RXYGFVHLDATGDVNDAIKELNGMMVDGQPMKV 751
R P++ +F+K G V + +I+ + +GFV + D + A E NG ++G+ ++V
Sbjct: 112 REPDLTAMFEKVGPVVDVEIIFNERGSKGFGFVTMQNPDDADRARAEFNGTTIEGRRVEV 171
Query: 750 QLSTSRVRQR 721
L+T RV +
Sbjct: 172 NLATQRVHNK 181
>U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform c protein.
Length = 118
Score = 42.3 bits (95), Expect = 5e-04
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Frame = -3
Query: 903 EVRELFQKFGTVXECDIVRX---YGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTSR 733
E+ E+F +FG + + + R + FV D D DA++ L+G + G +V+LST +
Sbjct: 18 ELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDGSRICGVRARVELSTGQ 77
Query: 732 VRQRPGMG 709
R G G
Sbjct: 78 RRGGGGRG 85
>U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform b protein.
Length = 153
Score = 42.3 bits (95), Expect = 5e-04
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Frame = -3
Query: 903 EVRELFQKFGTVXECDIVRX---YGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTSR 733
E+ E+F +FG + + + R + FV D D DA++ L+G + G +V+LST +
Sbjct: 18 ELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDGSRICGVRARVELSTGQ 77
Query: 732 VRQRPGMG 709
R G G
Sbjct: 78 RRGGGGRG 85
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 39.9 bits (89), Expect = 0.003
Identities = 23/84 (27%), Positives = 39/84 (46%)
Frame = -3
Query: 924 TDQTRAPEVRELFQKFGTVXECDIVRXYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQL 745
T + ++ F+ +G + + + +GFV D D DA+ +LNG + G+ + +
Sbjct: 11 TSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKRDAEDAVHDLNGKELGGERVILDY 70
Query: 744 STSRVRQRPGMGDPEQCYRCGRGG 673
S + R G GD GRGG
Sbjct: 71 S----KPRGGGGDRGGFGGGGRGG 90
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 39.9 bits (89), Expect = 0.003
Identities = 23/84 (27%), Positives = 39/84 (46%)
Frame = -3
Query: 924 TDQTRAPEVRELFQKFGTVXECDIVRXYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQL 745
T + ++ F+ +G + + + +GFV D D DA+ +LNG + G+ + +
Sbjct: 11 TSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKRDAEDAVHDLNGKELGGERVILDY 70
Query: 744 STSRVRQRPGMGDPEQCYRCGRGG 673
S + R G GD GRGG
Sbjct: 71 S----KPRGGGGDRGGFGGGGRGG 90
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 39.9 bits (89), Expect = 0.003
Identities = 23/84 (27%), Positives = 39/84 (46%)
Frame = -3
Query: 924 TDQTRAPEVRELFQKFGTVXECDIVRXYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQL 745
T + ++ F+ +G + + + +GFV D D DA+ +LNG + G+ + +
Sbjct: 11 TSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKRDAEDAVHDLNGKELGGERVILDY 70
Query: 744 STSRVRQRPGMGDPEQCYRCGRGG 673
S + R G GD GRGG
Sbjct: 71 S----KPRGGGGDRGGFGGGGRGG 90
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 38.3 bits (85), Expect = 0.008
Identities = 23/92 (25%), Positives = 44/92 (47%), Gaps = 11/92 (11%)
Frame = -3
Query: 900 VRELFQKFGTVXECDIV-------RXYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLS 742
+ + F FG + C + + YGFVH + +AI+++NGM++ G+ + V
Sbjct: 136 IYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAAQNAIQKVNGMLLAGKKVFVGKF 195
Query: 741 TSRVRQRPGMGDPEQ----CYRCGRGGHWSKE 658
R ++ +G+ + Y G H++KE
Sbjct: 196 QPRAQRNRELGETAKQFTNVYVKNFGDHYNKE 227
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/65 (20%), Positives = 31/65 (47%), Gaps = 6/65 (9%)
Frame = -3
Query: 921 DQTRAPEVRELFQKFGTVXECDIV------RXYGFVHLDATGDVNDAIKELNGMMVDGQP 760
D + ++F KFG + C+++ + +GFV + A++ L+ ++G
Sbjct: 222 DHYNKETLEKVFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQALHDSTIEGTD 281
Query: 759 MKVQL 745
+K+ +
Sbjct: 282 LKLHV 286
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 38.3 bits (85), Expect = 0.008
Identities = 31/105 (29%), Positives = 49/105 (46%), Gaps = 7/105 (6%)
Frame = -3
Query: 912 RAPEVRELFQKFGTVXECDIVRXYG----FVHLDATGDVNDAIKELNGMMVDGQPMKVQL 745
R EV ++F K+G + DI G FV + D DA++ +G DG+ ++V+
Sbjct: 21 REKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDAEDAVRARDGYEFDGRRIRVEF 80
Query: 744 STSRVRQRPGMGDPEQCYRCGRGGHW--SKECPKALGPD-RNGFR 619
+ + PG G P Q RGG + + + GP R G+R
Sbjct: 81 TRGVGPRGPG-GRPLQDGGDHRGGDFRGGRGGGRGGGPQRRTGYR 124
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 38.3 bits (85), Expect = 0.008
Identities = 23/92 (25%), Positives = 44/92 (47%), Gaps = 11/92 (11%)
Frame = -3
Query: 900 VRELFQKFGTVXECDIV-------RXYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLS 742
+ + F FG + C + + YGFVH + +AI+++NGM++ G+ + V
Sbjct: 73 IYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAAQNAIQKVNGMLLAGKKVFVGKF 132
Query: 741 TSRVRQRPGMGDPEQ----CYRCGRGGHWSKE 658
R ++ +G+ + Y G H++KE
Sbjct: 133 QPRAQRNRELGETAKQFTNVYVKNFGDHYNKE 164
Score = 29.9 bits (64), Expect = 2.7
Identities = 14/65 (21%), Positives = 31/65 (47%), Gaps = 6/65 (9%)
Frame = -3
Query: 921 DQTRAPEVRELFQKFGTVXECDIV------RXYGFVHLDATGDVNDAIKELNGMMVDGQP 760
D + +LF KFG + C+++ + +GFV + A++ L+ ++G
Sbjct: 159 DHYNKETLEKLFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQALHDSTIEGTD 218
Query: 759 MKVQL 745
+K+ +
Sbjct: 219 LKLHV 223
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 38.3 bits (85), Expect = 0.008
Identities = 23/92 (25%), Positives = 44/92 (47%), Gaps = 11/92 (11%)
Frame = -3
Query: 900 VRELFQKFGTVXECDIV-------RXYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLS 742
+ + F FG + C + + YGFVH + +AI+++NGM++ G+ + V
Sbjct: 136 IYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAAQNAIQKVNGMLLAGKKVFVGKF 195
Query: 741 TSRVRQRPGMGDPEQ----CYRCGRGGHWSKE 658
R ++ +G+ + Y G H++KE
Sbjct: 196 QPRAQRNRELGETAKQFTNVYVKNFGDHYNKE 227
Score = 29.9 bits (64), Expect = 2.7
Identities = 14/65 (21%), Positives = 31/65 (47%), Gaps = 6/65 (9%)
Frame = -3
Query: 921 DQTRAPEVRELFQKFGTVXECDIV------RXYGFVHLDATGDVNDAIKELNGMMVDGQP 760
D + +LF KFG + C+++ + +GFV + A++ L+ ++G
Sbjct: 222 DHYNKETLEKLFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQALHDSTIEGTD 281
Query: 759 MKVQL 745
+K+ +
Sbjct: 282 LKLHV 286
>Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical
protein R74.5b protein.
Length = 286
Score = 37.9 bits (84), Expect = 0.010
Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 6/63 (9%)
Frame = -3
Query: 891 LFQKFGTVXECDIV------RXYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTSRV 730
+F+K G V + +I+ + +GFV + D + A E NG ++G+ ++V L+T RV
Sbjct: 1 MFEKVGPVVDVEIIFNERGSKGFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLATQRV 60
Query: 729 RQR 721
+
Sbjct: 61 HNK 63
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 37.9 bits (84), Expect = 0.010
Identities = 32/105 (30%), Positives = 48/105 (45%), Gaps = 7/105 (6%)
Frame = -3
Query: 912 RAPEVRELFQKFGTVXECDIVRXYG----FVHLDATGDVNDAIKELNGMMVDGQPMKVQL 745
R EV ++F K+G + DI G FV + D DA++ +G DG+ ++V+
Sbjct: 21 REKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDAEDAVRARDGYEFDGRRIRVEF 80
Query: 744 STSRVRQRPGMGDPEQCYRCGRGGHW--SKECPKALGPD-RNGFR 619
T V R G P Q RGG + + + GP R G+R
Sbjct: 81 -TRGVGPRGPSGRPLQDGGDHRGGDFRGGRGGGRGGGPQRRTGYR 124
>AC006672-4|AAK84542.1| 151|Caenorhabditis elegans Hypothetical
protein K08D12.3a protein.
Length = 151
Score = 37.9 bits (84), Expect = 0.010
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -3
Query: 726 QRPGMGDPEQCYRCGRGGHWSKECPKALGPDRNG 625
QR G G CY CG GH+S++CP A +G
Sbjct: 59 QRGGGGGGGSCYNCGGRGHYSRDCPSARSEGGSG 92
Score = 33.5 bits (73), Expect = 0.22
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -3
Query: 723 RPGMGDPEQCYRCGRGGHWSKECPK 649
R G G CY C GH+S++CPK
Sbjct: 28 RRGGGGGSTCYNCQETGHFSRDCPK 52
Score = 32.7 bits (71), Expect = 0.39
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = -3
Query: 702 EQCYRCGRGGHWSKECPKA 646
++CY CGR GH S+EC ++
Sbjct: 107 QKCYNCGRSGHISRECTES 125
Score = 31.1 bits (67), Expect = 1.2
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -3
Query: 738 SRVRQRPGMGDPEQCYRCGRGGHWSKECP 652
SR G + ++CY+C GH S++CP
Sbjct: 119 SRECTESGSAEEKRCYQCQETGHISRDCP 147
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 36.3 bits (80), Expect = 0.031
Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 8/85 (9%)
Frame = -3
Query: 903 EVRELFQKFGTVXECDIVRX--------YGFVHLDATGDVNDAIKELNGMMVDGQPMKVQ 748
++RE F KFG V E I+R YGFV D AI E+NG + + ++
Sbjct: 147 KLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSYPRREDAERAIDEMNGAWLGRRTIRTN 206
Query: 747 LSTSRVRQRPGMGDPEQCYRCGRGG 673
+T + + G R G GG
Sbjct: 207 WATRKPDEDGERGGDRGDRRGGGGG 231
Score = 28.7 bits (61), Expect = 6.3
Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Frame = -3
Query: 903 EVRELFQKFGTVXECDI--VRXYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTSRV 730
E+R F +FG + E ++ Y FV + AI ++N + GQ ++ S
Sbjct: 270 EIRRAFDRFGPINEVRTFKIQGYAFVKFETKESAARAIVQMNNADIGGQIVRCSWGKSGD 329
Query: 729 RQRP 718
+P
Sbjct: 330 SGKP 333
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 35.9 bits (79), Expect = 0.041
Identities = 20/77 (25%), Positives = 38/77 (49%), Gaps = 8/77 (10%)
Frame = -3
Query: 915 TRAPEVRELFQKFGTVXECDIV--------RXYGFVHLDATGDVNDAIKELNGMMVDGQP 760
T ++R++F +FG + +CD+V R +GF++ + D A +L +DG
Sbjct: 87 TTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYFNLIEDATAARDKLCNTDLDGHK 146
Query: 759 MKVQLSTSRVRQRPGMG 709
++V S ++ P G
Sbjct: 147 IRVDFSLTKRGHSPTPG 163
>Z54236-5|CAA90980.1| 386|Caenorhabditis elegans Hypothetical
protein C27B7.5 protein.
Length = 386
Score = 35.5 bits (78), Expect = 0.055
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -3
Query: 723 RPGMGDPEQCYRCGRGGHWSKECPKALG-PDRNG 625
R G G P C+ C GH S+ CPK +G D +G
Sbjct: 161 RRGRGGPGHCFHCQEHGHISRMCPKKVGETDEHG 194
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 35.1 bits (77), Expect = 0.072
Identities = 18/72 (25%), Positives = 34/72 (47%), Gaps = 7/72 (9%)
Frame = -3
Query: 900 VRELFQKFGTVXECDIV-------RXYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLS 742
V + F FG + C + + YGFVH + AI+++NGM++ + + V
Sbjct: 161 VYDTFSLFGNILSCKVATDDEGNSKGYGFVHFETEHSAQTAIEKVNGMLLSDKKVYVGKF 220
Query: 741 TSRVRQRPGMGD 706
R ++ +G+
Sbjct: 221 QPRAQRMKELGE 232
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 35.1 bits (77), Expect = 0.072
Identities = 18/72 (25%), Positives = 34/72 (47%), Gaps = 7/72 (9%)
Frame = -3
Query: 900 VRELFQKFGTVXECDIV-------RXYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLS 742
V + F FG + C + + YGFVH + AI+++NGM++ + + V
Sbjct: 161 VYDTFSLFGNILSCKVATDDEGNSKGYGFVHFETEHSAQTAIEKVNGMLLSDKKVYVGKF 220
Query: 741 TSRVRQRPGMGD 706
R ++ +G+
Sbjct: 221 QPRAQRMKELGE 232
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 35.1 bits (77), Expect = 0.072
Identities = 14/61 (22%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = -3
Query: 921 DQTRAPEVRELFQKFGTVXECDIV-RXYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQL 745
++ + E++ELF G + EC + + + F+ LD A + ++G ++ G+ ++V+
Sbjct: 125 NEVKETELKELFSPHGDIAECYLSGKGFAFLRLDTRAHAESAKEAIDGRIIHGRQVRVRF 184
Query: 744 S 742
+
Sbjct: 185 A 185
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 35.1 bits (77), Expect = 0.072
Identities = 14/61 (22%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = -3
Query: 921 DQTRAPEVRELFQKFGTVXECDIV-RXYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQL 745
++ + E++ELF G + EC + + + F+ LD A + ++G ++ G+ ++V+
Sbjct: 125 NEVKETELKELFSPHGDIAECYLSGKGFAFLRLDTRAHAESAKEAIDGRIIHGRQVRVRF 184
Query: 744 S 742
+
Sbjct: 185 A 185
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 35.1 bits (77), Expect = 0.072
Identities = 14/54 (25%), Positives = 31/54 (57%)
Frame = -3
Query: 903 EVRELFQKFGTVXECDIVRXYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLS 742
++ ELF+++ ++ V+ Y F+H + D A++E NG ++G ++ L+
Sbjct: 392 KLNELFKEYASLDRVKKVKDYAFIHFNERDDCLKAMEEWNGKELEGTVVEASLA 445
>AF040642-7|AAB94952.1| 329|Caenorhabditis elegans Collagen protein
68 protein.
Length = 329
Score = 35.1 bits (77), Expect = 0.072
Identities = 20/43 (46%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = +3
Query: 630 CGRGP-APSGTPWTSGPRGHSGSTAR-GRPCPAAAGHDSSTTA 752
CG GP PSG P T G G+ GS G P A G +S T A
Sbjct: 138 CGVGPPGPSGAPGTDGNPGNDGSPGNPGTPGQDAVGDESPTAA 180
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 34.7 bits (76), Expect = 0.096
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = -3
Query: 708 DPEQCYRCGRGGHWSKECPKALGP--DRNGFRDRAFG 604
+P CY C + GH S++CP+ P RNGF + G
Sbjct: 280 EPRVCYNCQQPGHNSRDCPEERKPREGRNGFTGGSSG 316
Score = 34.3 bits (75), Expect = 0.13
Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Frame = -3
Query: 708 DPEQCYRCGRGGHWSKECPKALGP--DRNGF 622
+P CY C + GH S++CP+ P RNGF
Sbjct: 394 EPRVCYNCQQPGHNSRDCPEERKPREGRNGF 424
Score = 31.9 bits (69), Expect = 0.67
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -3
Query: 705 PEQCYRCGRGGHWSKECPKALGP 637
P C+ CG GH S ECP P
Sbjct: 472 PRGCFNCGEQGHRSNECPNPAKP 494
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 34.7 bits (76), Expect = 0.096
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = -3
Query: 708 DPEQCYRCGRGGHWSKECPKALGP--DRNGFRDRAFG 604
+P CY C + GH S++CP+ P RNGF + G
Sbjct: 280 EPRVCYNCQQPGHNSRDCPEERKPREGRNGFTGGSSG 316
Score = 34.3 bits (75), Expect = 0.13
Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Frame = -3
Query: 708 DPEQCYRCGRGGHWSKECPKALGP--DRNGF 622
+P CY C + GH S++CP+ P RNGF
Sbjct: 394 EPRVCYNCQQPGHNSRDCPEERKPREGRNGF 424
Score = 31.9 bits (69), Expect = 0.67
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -3
Query: 705 PEQCYRCGRGGHWSKECPKALGP 637
P C+ CG GH S ECP P
Sbjct: 472 PRGCFNCGEQGHRSNECPNPAKP 494
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 34.7 bits (76), Expect = 0.096
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = -3
Query: 708 DPEQCYRCGRGGHWSKECPKALGP--DRNGFRDRAFG 604
+P CY C + GH S++CP+ P RNGF + G
Sbjct: 280 EPRVCYNCQQPGHNSRDCPEERKPREGRNGFTGGSSG 316
Score = 34.3 bits (75), Expect = 0.13
Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Frame = -3
Query: 708 DPEQCYRCGRGGHWSKECPKALGP--DRNGF 622
+P CY C + GH S++CP+ P RNGF
Sbjct: 394 EPRVCYNCQQPGHNSRDCPEERKPREGRNGF 424
Score = 31.9 bits (69), Expect = 0.67
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -3
Query: 705 PEQCYRCGRGGHWSKECPKALGP 637
P C+ CG GH S ECP P
Sbjct: 472 PRGCFNCGEQGHRSNECPNPAKP 494
>Z81503-1|CAB04111.1| 305|Caenorhabditis elegans Hypothetical
protein F14F7.1 protein.
Length = 305
Score = 34.3 bits (75), Expect = 0.13
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +3
Query: 642 PAPSGTPWTSGPRGHSGSTARGRPCPA 722
P P+G GP GH GS+ GRP PA
Sbjct: 223 PGPAGPRGAPGPAGHPGSSGGGRPGPA 249
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 33.1 bits (72), Expect = 0.29
Identities = 17/68 (25%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Frame = -3
Query: 903 EVRELFQKFGTVXECDIVRXYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTSRV-- 730
+V F+ +G + + + +GFV D +DA+ +LNG + G+ + ++ +V
Sbjct: 17 DVEHFFRGYGKLSDVIMKNGFGFVDFQDQRDADDAVHDLNGKELCGERVILEFPRRKVGY 76
Query: 729 -RQRPGMG 709
+R G G
Sbjct: 77 NEERSGSG 84
>U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 5 protein.
Length = 289
Score = 33.1 bits (72), Expect = 0.29
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = -3
Query: 849 RXYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTSR 733
R YG+V D D +IK ++G +DG + V+++ R
Sbjct: 175 RGYGYVEYDNLEDAEKSIKHMDGGQIDGMAVHVEMTIGR 213
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 32.7 bits (71), Expect = 0.39
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 8/59 (13%)
Frame = -3
Query: 903 EVRELFQKFGTVXECDIVRX--------YGFVHLDATGDVNDAIKELNGMMVDGQPMKV 751
EVR LF G + C +VR YGFV+ D A+ NG+ + + +KV
Sbjct: 57 EVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDALRAVSSFNGLRLQNKTIKV 115
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 32.7 bits (71), Expect = 0.39
Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 8/67 (11%)
Frame = -3
Query: 918 QTRAPEVRELFQKFGTVXECDIVRX--------YGFVHLDATGDVNDAIKELNGMMVDGQ 763
QT ++R F+++G + + I R +GFV D A+ +G +VDG+
Sbjct: 29 QTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALDRTDGKLVDGR 88
Query: 762 PMKVQLS 742
++V L+
Sbjct: 89 ELRVTLA 95
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 32.7 bits (71), Expect = 0.39
Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 8/67 (11%)
Frame = -3
Query: 918 QTRAPEVRELFQKFGTVXECDIVRX--------YGFVHLDATGDVNDAIKELNGMMVDGQ 763
QT ++R F+++G + + I R +GFV D A+ +G +VDG+
Sbjct: 29 QTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALDRTDGKLVDGR 88
Query: 762 PMKVQLS 742
++V L+
Sbjct: 89 ELRVTLA 95
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 32.7 bits (71), Expect = 0.39
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -3
Query: 726 QRPGMGDPEQCYRCGRGGHWSKECP 652
+R M E C RC GHW ECP
Sbjct: 657 ERVRMEPTEPCRRCAEEGHWGYECP 681
Score = 31.5 bits (68), Expect = 0.89
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -3
Query: 705 PEQCYRCGRGGHWSKECPKALGP 637
P C+ CG GH SKEC K P
Sbjct: 569 PRGCHNCGEEGHISKECDKPKVP 591
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line
helicase protein 4 protein.
Length = 1156
Score = 32.7 bits (71), Expect = 0.39
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -3
Query: 726 QRPGMGDPEQCYRCGRGGHWSKECP 652
+R M E C RC GHW ECP
Sbjct: 657 ERVRMEPTEPCRRCAEEGHWGYECP 681
Score = 31.5 bits (68), Expect = 0.89
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -3
Query: 705 PEQCYRCGRGGHWSKECPKALGP 637
P C+ CG GH SKEC K P
Sbjct: 569 PRGCHNCGEEGHISKECDKPKVP 591
>AF077533-3|AAC64626.1| 1023|Caenorhabditis elegans Hypothetical
protein F54G2.2 protein.
Length = 1023
Score = 32.3 bits (70), Expect = 0.51
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = -3
Query: 729 RQRPGMGDPEQCYRCGRGGHWSKECPKAL 643
R+RP P QC+ CG GH S CPK +
Sbjct: 603 RERP----PPQCFTCGEMGHISTYCPKRI 627
>Z81532-7|CAJ34990.1| 363|Caenorhabditis elegans Hypothetical
protein F36F2.3b protein.
Length = 363
Score = 31.9 bits (69), Expect = 0.67
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 5/34 (14%)
Frame = -3
Query: 729 RQRPGM--GDPEQ---CYRCGRGGHWSKECPKAL 643
R++PG+ G P C RC + GHW K CP L
Sbjct: 142 RRQPGIMTGPPPPTYTCNRCSQPGHWYKNCPMKL 175
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 31.9 bits (69), Expect = 0.67
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +3
Query: 642 PAPSGTPWTSGPRGHSGSTARGRPCPAA-AGHDSSTTAP 755
P P+G P +GP G+ G+ G P PA G + AP
Sbjct: 220 PGPAGPPGPAGPAGNDGAPGTGGPGPAGPKGPPGAAGAP 258
Score = 29.1 bits (62), Expect = 4.8
Identities = 21/48 (43%), Positives = 25/48 (52%), Gaps = 9/48 (18%)
Frame = +3
Query: 639 GPA-PSGTPWTSGPRGHSGSTA-------RGRPCPAA-AGHDSSTTAP 755
GPA P+G P GP G+ GS A G P PA AG+D + AP
Sbjct: 156 GPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAP 203
Score = 28.3 bits (60), Expect = 8.3
Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = +3
Query: 639 GPAPSGTPWTSGPRGHSGST-ARGRPCPAAAGHDSSTTAP 755
GP P+G P +GP G+ G+ A G P A P
Sbjct: 181 GPGPAGPPGPAGPAGNDGAPGAPGGPGEPGASEQGGPGEP 220
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 31.9 bits (69), Expect = 0.67
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +3
Query: 642 PAPSGTPWTSGPRGHSGSTARGRPCPAA-AGHDSSTTAP 755
P P+G P +GP G+ G+ G P PA G + AP
Sbjct: 220 PGPAGPPGPAGPAGNDGAPGTGGPGPAGPKGPPGAAGAP 258
Score = 29.1 bits (62), Expect = 4.8
Identities = 21/48 (43%), Positives = 25/48 (52%), Gaps = 9/48 (18%)
Frame = +3
Query: 639 GPA-PSGTPWTSGPRGHSGSTA-------RGRPCPAA-AGHDSSTTAP 755
GPA P+G P GP G+ GS A G P PA AG+D + AP
Sbjct: 156 GPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAP 203
Score = 28.3 bits (60), Expect = 8.3
Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = +3
Query: 639 GPAPSGTPWTSGPRGHSGST-ARGRPCPAAAGHDSSTTAP 755
GP P+G P +GP G+ G+ A G P A P
Sbjct: 181 GPGPAGPPGPAGPAGNDGAPGAPGGPGEPGASEQGGPGEP 220
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 31.9 bits (69), Expect = 0.67
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -3
Query: 705 PEQCYRCGRGGHWSKECPKALGP 637
P C+ CG GH S ECP P
Sbjct: 261 PRGCFNCGEQGHRSNECPNPAKP 283
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -3
Query: 708 DPEQCYRCGRGGHWSKECPKALGPDRNGFRDRAFG 604
+P CY C + GH S+EC + P R G R FG
Sbjct: 181 EPRVCYNCQQPGHTSRECTEERKP-REG-RTGGFG 213
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 31.9 bits (69), Expect = 0.67
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -3
Query: 705 PEQCYRCGRGGHWSKECPKALGP 637
P C+ CG GH S ECP P
Sbjct: 261 PRGCFNCGEQGHRSNECPNPAKP 283
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -3
Query: 708 DPEQCYRCGRGGHWSKECPKALGPDRNGFRDRAFG 604
+P CY C + GH S+EC + P R G R FG
Sbjct: 181 EPRVCYNCQQPGHTSRECTEERKP-REG-RTGGFG 213
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 31.9 bits (69), Expect = 0.67
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +3
Query: 642 PAPSGTPWTSGPRGHSGSTARGRPCPAA-AGHDSSTTAP 755
P P+G P +GP G+ G+ G P PA G + AP
Sbjct: 220 PGPAGPPGPAGPAGNDGAPGTGGPGPAGPKGPPGAAGAP 258
Score = 29.1 bits (62), Expect = 4.8
Identities = 21/48 (43%), Positives = 25/48 (52%), Gaps = 9/48 (18%)
Frame = +3
Query: 639 GPA-PSGTPWTSGPRGHSGSTA-------RGRPCPAA-AGHDSSTTAP 755
GPA P+G P GP G+ GS A G P PA AG+D + AP
Sbjct: 156 GPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAP 203
Score = 28.3 bits (60), Expect = 8.3
Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = +3
Query: 639 GPAPSGTPWTSGPRGHSGST-ARGRPCPAAAGHDSSTTAP 755
GP P+G P +GP G+ G+ A G P A P
Sbjct: 181 GPGPAGPPGPAGPAGNDGAPGAPGGPGEPGASEQGGPGEP 220
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 31.9 bits (69), Expect = 0.67
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +3
Query: 642 PAPSGTPWTSGPRGHSGSTARGRPCPAA-AGHDSSTTAP 755
P P+G P +GP G+ G+ G P PA G + AP
Sbjct: 220 PGPAGPPGPAGPAGNDGAPGTGGPGPAGPKGPPGAAGAP 258
Score = 29.1 bits (62), Expect = 4.8
Identities = 21/48 (43%), Positives = 25/48 (52%), Gaps = 9/48 (18%)
Frame = +3
Query: 639 GPA-PSGTPWTSGPRGHSGSTA-------RGRPCPAA-AGHDSSTTAP 755
GPA P+G P GP G+ GS A G P PA AG+D + AP
Sbjct: 156 GPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAP 203
Score = 28.3 bits (60), Expect = 8.3
Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
Frame = +3
Query: 639 GPAPSGTPWTSGPRGHSGST-ARGRPCPAAAGHDSSTTAP 755
GP P+G P +GP G+ G+ A G P A P
Sbjct: 181 GPGPAGPPGPAGPAGNDGAPGAPGGPGEPGASEQGGPGEP 220
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 31.9 bits (69), Expect = 0.67
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -3
Query: 705 PEQCYRCGRGGHWSKECPKALGP 637
P C+ CG GH S ECP P
Sbjct: 261 PRGCFNCGEQGHRSNECPNPAKP 283
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -3
Query: 708 DPEQCYRCGRGGHWSKECPKALGPDRNGFRDRAFG 604
+P CY C + GH S+EC + P R G R FG
Sbjct: 181 EPRVCYNCQQPGHTSRECTEERKP-REG-RTGGFG 213
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 31.5 bits (68), Expect = 0.89
Identities = 17/67 (25%), Positives = 30/67 (44%), Gaps = 8/67 (11%)
Frame = -3
Query: 918 QTRAPEVRELFQKFGTVXECDIV--------RXYGFVHLDATGDVNDAIKELNGMMVDGQ 763
QT E+ F G + IV R + F+ G A++++NG +G+
Sbjct: 15 QTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAVEQMNGAEFNGR 74
Query: 762 PMKVQLS 742
P++V L+
Sbjct: 75 PLRVNLA 81
>U39644-7|AAO44908.1| 307|Caenorhabditis elegans Collagen protein
171 protein.
Length = 307
Score = 31.5 bits (68), Expect = 0.89
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +3
Query: 618 RGNRCGRGPAPSGTPWTSGPRGHSGSTARGRP-CPAAAGHD 737
+G CG G + +G P + GP G GS GRP P G D
Sbjct: 109 QGGCCGCGTSAAGPPGSPGPDGQEGS--NGRPGAPGTNGPD 147
>AF016670-8|AAB66101.1| 783|Caenorhabditis elegans Hypothetical
protein K02F6.1 protein.
Length = 783
Score = 31.5 bits (68), Expect = 0.89
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -3
Query: 756 KVQLSTSRVRQRPGMGDPEQCYRCGRGGHWSKECPKA 646
+V + R G P CY+C GH SK+CP++
Sbjct: 293 QVDADDKKKDSRKGNYRPPYCYKCKVVGHVSKDCPQS 329
>Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical
protein F36F2.3a protein.
Length = 1128
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 5/31 (16%)
Frame = -3
Query: 729 RQRPGM--GDPEQ---CYRCGRGGHWSKECP 652
R++PG+ G P C RC + GHW K CP
Sbjct: 142 RRQPGIMTGPPPPTYTCNRCSQPGHWYKNCP 172
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 31.1 bits (67), Expect = 1.2
Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 8/65 (12%)
Frame = -3
Query: 903 EVRELFQKFGTVXECDIVRX--------YGFVHLDATGDVNDAIKELNGMMVDGQPMKVQ 748
++RE FQ FG V + ++R YGFV + AI+++NG + + ++
Sbjct: 37 KLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTN 96
Query: 747 LSTSR 733
+T +
Sbjct: 97 WATRK 101
Score = 29.5 bits (63), Expect = 3.6
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = -3
Query: 903 EVRELFQKFGTVXECDI--VRXYGFVHLDATGDVNDAIKELNGMMVDGQ 763
E+R+ F FG + E I ++ Y FV D AI ++N V GQ
Sbjct: 142 EIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQ 190
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 31.1 bits (67), Expect = 1.2
Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 8/65 (12%)
Frame = -3
Query: 903 EVRELFQKFGTVXECDIVRX--------YGFVHLDATGDVNDAIKELNGMMVDGQPMKVQ 748
++RE FQ FG V + ++R YGFV + AI+++NG + + ++
Sbjct: 47 KLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTN 106
Query: 747 LSTSR 733
+T +
Sbjct: 107 WATRK 111
Score = 29.5 bits (63), Expect = 3.6
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = -3
Query: 903 EVRELFQKFGTVXECDI--VRXYGFVHLDATGDVNDAIKELNGMMVDGQ 763
E+R+ F FG + E I ++ Y FV D AI ++N V GQ
Sbjct: 152 EIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQ 200
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 31.1 bits (67), Expect = 1.2
Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 8/65 (12%)
Frame = -3
Query: 903 EVRELFQKFGTVXECDIVRX--------YGFVHLDATGDVNDAIKELNGMMVDGQPMKVQ 748
++RE FQ FG V + ++R YGFV + AI+++NG + + ++
Sbjct: 150 KLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTN 209
Query: 747 LSTSR 733
+T +
Sbjct: 210 WATRK 214
Score = 29.5 bits (63), Expect = 3.6
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = -3
Query: 903 EVRELFQKFGTVXECDI--VRXYGFVHLDATGDVNDAIKELNGMMVDGQ 763
E+R+ F FG + E I ++ Y FV D AI ++N V GQ
Sbjct: 255 EIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQ 303
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 31.1 bits (67), Expect = 1.2
Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 8/65 (12%)
Frame = -3
Query: 903 EVRELFQKFGTVXECDIVRX--------YGFVHLDATGDVNDAIKELNGMMVDGQPMKVQ 748
++RE FQ FG V + ++R YGFV + AI+++NG + + ++
Sbjct: 118 KLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQMNGQWLGRRTIRTN 177
Query: 747 LSTSR 733
+T +
Sbjct: 178 WATRK 182
Score = 29.5 bits (63), Expect = 3.6
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = -3
Query: 903 EVRELFQKFGTVXECDI--VRXYGFVHLDATGDVNDAIKELNGMMVDGQ 763
E+R+ F FG + E I ++ Y FV D AI ++N V GQ
Sbjct: 223 EIRQGFASFGRITEVRIFKMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQ 271
>AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical
protein C24F3.6 protein.
Length = 291
Score = 31.1 bits (67), Expect = 1.2
Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = +3
Query: 621 GNRCGRGP-APSGTPWTSGPRGHSGSTARGRPCPAAAGHDSSTTAP 755
GN+ GP P G P +GP G +G+ G P P A G P
Sbjct: 176 GNKGPAGPPGPGGKPGPAGPPGENGN--NGEPQPGAPGEPGQPGQP 219
>AF022985-9|AAB69960.1| 314|Caenorhabditis elegans Collagen protein
141 protein.
Length = 314
Score = 31.1 bits (67), Expect = 1.2
Identities = 21/55 (38%), Positives = 23/55 (41%), Gaps = 9/55 (16%)
Frame = +3
Query: 618 RGNRCGRG-PAPSGTPWTSGPRG-------HSGSTARGRP-CPAAAGHDSSTTAP 755
RG + RG P PSG P GP G GS G+P P A GH P
Sbjct: 202 RGGQRSRGLPGPSGRPGPQGPAGGPGQPGQSGGSGTPGQPGAPGAPGHPGQAGTP 256
>Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical
protein F55C10.3 protein.
Length = 266
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/38 (42%), Positives = 17/38 (44%)
Frame = +3
Query: 642 PAPSGTPWTSGPRGHSGSTARGRPCPAAAGHDSSTTAP 755
P P G P GP G SG A G P + G D AP
Sbjct: 114 PCPQGPPGPPGPPGPSGD-AGGNGNPGSPGQDGQPGAP 150
>Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical
protein F55C10.2 protein.
Length = 299
Score = 30.7 bits (66), Expect = 1.6
Identities = 16/38 (42%), Positives = 17/38 (44%)
Frame = +3
Query: 642 PAPSGTPWTSGPRGHSGSTARGRPCPAAAGHDSSTTAP 755
P P G P GP G SG A G P + G D AP
Sbjct: 147 PCPQGPPGPPGPPGPSGD-AGGNGNPGSPGQDGQPGAP 183
>U23515-13|AAK21453.1| 823|Caenorhabditis elegans Hypothetical
protein R144.2a protein.
Length = 823
Score = 30.7 bits (66), Expect = 1.6
Identities = 12/34 (35%), Positives = 23/34 (67%)
Frame = -1
Query: 521 TMIVHGSILHGTCSSDAIQLEEHHEGWNWADLEE 420
T+ VHG I+H C+SDA + ++ +N +D+++
Sbjct: 785 TVNVHGKIVHSACASDAARSLDNSSFFNDSDIKK 818
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/68 (23%), Positives = 31/68 (45%), Gaps = 8/68 (11%)
Frame = -3
Query: 915 TRAPEVRELFQKFGTVXECDIVR--------XYGFVHLDATGDVNDAIKELNGMMVDGQP 760
T ++ +F +FG + C+IVR Y F+ D A +++ +++D +
Sbjct: 252 TTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKMDNVLIDDRR 311
Query: 759 MKVQLSTS 736
+ V S S
Sbjct: 312 IHVDFSQS 319
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = -3
Query: 849 RXYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTSRVRQRP 718
+ +GFV D AI +NG + + +KVQL R RP
Sbjct: 470 KCFGFVSYDNIHSSQAAITAMNGFQIGMKRLKVQLKRPRNESRP 513
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/68 (23%), Positives = 31/68 (45%), Gaps = 8/68 (11%)
Frame = -3
Query: 915 TRAPEVRELFQKFGTVXECDIVR--------XYGFVHLDATGDVNDAIKELNGMMVDGQP 760
T ++ +F +FG + C+IVR Y F+ D A +++ +++D +
Sbjct: 252 TTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKMDNVLIDDRR 311
Query: 759 MKVQLSTS 736
+ V S S
Sbjct: 312 IHVDFSQS 319
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/68 (23%), Positives = 31/68 (45%), Gaps = 8/68 (11%)
Frame = -3
Query: 915 TRAPEVRELFQKFGTVXECDIVR--------XYGFVHLDATGDVNDAIKELNGMMVDGQP 760
T ++ +F +FG + C+IVR Y F+ D A +++ +++D +
Sbjct: 183 TTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKMDNVLIDDRR 242
Query: 759 MKVQLSTS 736
+ V S S
Sbjct: 243 IHVDFSQS 250
>Z79694-6|CAB01958.1| 316|Caenorhabditis elegans Hypothetical
protein C15A11.6 protein.
Length = 316
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/34 (47%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Frame = +3
Query: 633 GRG-PAPSGTPWTSGPRGHSGSTARGRPCPAAAG 731
GRG P PSG P + GP G G G P AG
Sbjct: 202 GRGLPGPSGAPGSQGPPGAPGQPGSGN-APGPAG 234
Score = 29.5 bits (63), Expect = 3.6
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +3
Query: 633 GRGPAPSGTPWTSGPRGHSGSTARGRPCPAAAGHDSS 743
G P P+G P +GP G G + P A G+D +
Sbjct: 227 GNAPGPAGPPGPAGPNGQPGHPGQDGQ-PGAPGNDGT 262
>Z49069-2|CAA88865.1| 333|Caenorhabditis elegans Hypothetical
protein K12D12.3 protein.
Length = 333
Score = 30.3 bits (65), Expect = 2.1
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +3
Query: 624 NRCGRGP-APSGTPWTSGPRGHSGSTARGRPCPAAAGHDSSTTAP 755
N+C GP P G+P + GP G G G+P GHDS P
Sbjct: 124 NKCHAGPPGPKGSPGSPGPNGVPG--VDGKP-----GHDSLDVTP 161
>U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform b protein.
Length = 420
Score = 30.3 bits (65), Expect = 2.1
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = -3
Query: 858 DIVRXYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTSR 733
++ + +GFV + +AI +NG + + +KVQL R
Sbjct: 373 NLSKCFGFVSYENAQSATNAISAMNGFQIGSKRLKVQLKVDR 414
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 30.3 bits (65), Expect = 2.1
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = -3
Query: 858 DIVRXYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTSR 733
++ + +GFV + +AI +NG + + +KVQL R
Sbjct: 537 NLSKCFGFVSYENAQSATNAISAMNGFQIGSKRLKVQLKVDR 578
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 30.3 bits (65), Expect = 2.1
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = -3
Query: 858 DIVRXYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTSR 733
++ + +GFV + +AI +NG + + +KVQL R
Sbjct: 537 NLSKCFGFVSYENAQSATNAISAMNGFQIGSKRLKVQLKVDR 578
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 30.3 bits (65), Expect = 2.1
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = -3
Query: 858 DIVRXYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTSR 733
++ + +GFV + +AI +NG + + +KVQL R
Sbjct: 466 NLSKCFGFVSYENAQSATNAISAMNGFQIGSKRLKVQLKVDR 507
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 30.3 bits (65), Expect = 2.1
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = -3
Query: 858 DIVRXYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTSR 733
++ + +GFV + +AI +NG + + +KVQL R
Sbjct: 537 NLSKCFGFVSYENAQSATNAISAMNGFQIGSKRLKVQLKVDR 578
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = -3
Query: 849 RXYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTSRVRQRP 718
+ +GFV D AI +NG + + +KVQL R RP
Sbjct: 470 KCFGFVSYDNIHSSQAAITAMNGFQIGMKRLKVQLKRPRNESRP 513
>AF098993-1|AAC67471.2| 367|Caenorhabditis elegans Zinc finger
transcription factorfamily protein 4 protein.
Length = 367
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/44 (29%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = -3
Query: 903 EVRELFQKFGTVXECDIV--RXYGFVHLDATGDVNDAIKELNGM 778
++ ELF+ FG + + + +GFV + G +++ + LNGM
Sbjct: 99 DIIELFRPFGKIIAVNYFAQQGFGFVQFNEAGSADESCRSLNGM 142
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 30.3 bits (65), Expect = 2.1
Identities = 12/27 (44%), Positives = 14/27 (51%)
Frame = +3
Query: 639 GPAPSGTPWTSGPRGHSGSTARGRPCP 719
GP P+G P GP G GS +P P
Sbjct: 250 GPGPAGPPGPPGPPGQDGSGGAAQPGP 276
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical
protein F54B11.2 protein.
Length = 304
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +3
Query: 642 PAPSGTPWTSGPRGHSGST-ARGRPCPAAAGHDSSTTAPS 758
P+P G P SGP G +G+ A G P P +S+ P+
Sbjct: 183 PSPPGPPGPSGPAGPAGNDGAAGTPGPDGPAGESTYPEPA 222
Score = 29.1 bits (62), Expect = 4.8
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = +3
Query: 642 PAPSGTPWTSGPRGHSGSTARGRPCP 719
P P G P T+GP G +G CP
Sbjct: 262 PGPDGNPGTAGPPGKAGGEGEKGICP 287
>Z49938-3|CAA90188.1| 306|Caenorhabditis elegans Hypothetical
protein F38A3.2 protein.
Length = 306
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Frame = +3
Query: 630 CGRGP-APSGTPWTSGPRGHSGSTARGRP-CPAAAGHDSSTTAP 755
C GP P+G P GP G++G A G+P P AG + AP
Sbjct: 162 CPAGPPGPAGNPGPKGPSGNAG--ADGQPGAPGNAGAAGAPGAP 203
>U41553-3|AAA83293.1| 289|Caenorhabditis elegans Collagen protein
19 protein.
Length = 289
Score = 29.9 bits (64), Expect = 2.7
Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = +3
Query: 621 GNRCGRGPAPSGTPWTSGPRGHSGST-ARGRPCPAAAGHDSST 746
GN P P G P GP+G +G A GRP PA + T
Sbjct: 166 GNGRRGPPGPVGGPGEQGPQGDAGRPGAAGRPGPAGPRGEPGT 208
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 29.9 bits (64), Expect = 2.7
Identities = 16/72 (22%), Positives = 35/72 (48%), Gaps = 7/72 (9%)
Frame = -3
Query: 918 QTRAPEVRELFQKFGTVXECDIV-------RXYGFVHLDATGDVNDAIKELNGMMVDGQP 760
+T ++R F+ +G + + +V R Y F+ +++ A K+ +G+ VDG+
Sbjct: 114 ETSESKLRREFEAYGKIKKLTMVHDEAGKPRGYAFIEYSDKAEMHTAYKKADGIKVDGKR 173
Query: 759 MKVQLSTSRVRQ 724
+ V R ++
Sbjct: 174 LVVDYERGRTQK 185
>M25481-1|AAA27987.1| 283|Caenorhabditis elegans collagen protein.
Length = 283
Score = 29.9 bits (64), Expect = 2.7
Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = +3
Query: 621 GNRCGRGPAPSGTPWTSGPRGHSGST-ARGRPCPAAAGHDSST 746
GN P P G P GP+G +G A GRP PA + T
Sbjct: 160 GNGRRGPPGPVGGPGEQGPQGDAGRPGAAGRPGPAGPRGEPGT 202
>CU457737-9|CAM36330.1| 281|Caenorhabditis elegans Hypothetical
protein C52D10.13 protein.
Length = 281
Score = 29.9 bits (64), Expect = 2.7
Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = +3
Query: 642 PAPSGTPWTSGPRGHSG-STARGRPCPAAAGHDSSTTAPSWAV 767
P+P G P GP+G G S A G P PA + P+ V
Sbjct: 139 PSPVGPPGPPGPKGPDGESGAPGEPGPAGRPGNKGAPGPAGPV 181
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 29.9 bits (64), Expect = 2.7
Identities = 14/65 (21%), Positives = 31/65 (47%), Gaps = 6/65 (9%)
Frame = -3
Query: 921 DQTRAPEVRELFQKFGTVXECDIV------RXYGFVHLDATGDVNDAIKELNGMMVDGQP 760
D + +LF KFG + C+++ + +GFV + A++ L+ ++G
Sbjct: 162 DHYNKETLEKLFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQALHDSTIEGTD 221
Query: 759 MKVQL 745
+K+ +
Sbjct: 222 LKLHV 226
>Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical
protein C15A11.5 protein.
Length = 316
Score = 29.5 bits (63), Expect = 3.6
Identities = 16/34 (47%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Frame = +3
Query: 633 GRG-PAPSGTPWTSGPRGHSGSTARGRPCPAAAG 731
GRG P PSG P GP G G G P AG
Sbjct: 202 GRGLPGPSGAPGPQGPPGAPGQPGSGN-APGPAG 234
Score = 29.5 bits (63), Expect = 3.6
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +3
Query: 633 GRGPAPSGTPWTSGPRGHSGSTARGRPCPAAAGHDSS 743
G P P+G P +GP G G + P A G+D +
Sbjct: 227 GNAPGPAGPPGPAGPNGQPGHPGQDGQ-PGAPGNDGT 262
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 29.5 bits (63), Expect = 3.6
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +3
Query: 639 GPAPSGTPWTSGPRGHSGSTARGRPCPAAAGHDSSTTA 752
GP P+G P +GP G+ G + P G D +++A
Sbjct: 196 GPGPAGPPGPAGPPGNDGQPGQ----PGGPGQDGASSA 229
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 3/30 (10%)
Frame = +3
Query: 639 GPAPSGTPWTSGPR---GHSGSTARGRPCP 719
GP P+G P +GP G SGS + G P P
Sbjct: 234 GPGPAGPPGPAGPAGPDGQSGSGSAGGPGP 263
>AF100656-7|AAF99964.2| 615|Caenorhabditis elegans Hypothetical
protein F49F1.8 protein.
Length = 615
Score = 29.5 bits (63), Expect = 3.6
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = -3
Query: 699 QCYRCGRGGHWSKEC-PKALGPDRNGFRDRA 610
QC+ C GH ++ C KA R G+ D+A
Sbjct: 575 QCHYCKNVGHMARNCKKKAFAEKRKGYEDQA 605
>AF022985-12|AAB69959.1| 319|Caenorhabditis elegans Collagen
protein 143 protein.
Length = 319
Score = 29.5 bits (63), Expect = 3.6
Identities = 19/44 (43%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Frame = +3
Query: 621 GNRCGRG-PAPSGTPWTSGPRGHSGST-ARGRP-CPAAAGHDSS 743
G G G P P G P SG GHSG+ G P P A G D++
Sbjct: 223 GRSGGAGTPGPQGPPGPSGQPGHSGNDGVPGTPGNPGAPGGDAA 266
>Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical
protein H06A10.2 protein.
Length = 305
Score = 29.1 bits (62), Expect = 4.8
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = +3
Query: 642 PAPSGTPWTSGPRGHSGSTARGRPCP 719
P P G P T+GP G +G CP
Sbjct: 263 PGPDGNPGTAGPPGKAGGEGEKGICP 288
Score = 28.3 bits (60), Expect = 8.3
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +3
Query: 642 PAPSGTPWTSGPRGHSGSTARGRPCPAAAGHDSSTTAPS 758
P P G P +GP G+ G A G P P +S+ P+
Sbjct: 187 PGPPGPPGPAGPAGNDG--AAGTPGPDGPAGESTYPEPA 223
Score = 28.3 bits (60), Expect = 8.3
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +3
Query: 639 GPAPSGTPWTSGPRGHSGSTARGRPCPAAAG 731
GP P+G P +GP G G++ P AAG
Sbjct: 224 GPGPAGPPGPAGPPGPDGASPTA--APGAAG 252
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 29.1 bits (62), Expect = 4.8
Identities = 10/34 (29%), Positives = 21/34 (61%)
Frame = -3
Query: 843 YGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLS 742
+GFV D A+K++ G ++DG +++++S
Sbjct: 691 FGFVQFYTAFDAKTALKDMQGELLDGHSLELKIS 724
>Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical
protein T06E4.4 protein.
Length = 290
Score = 29.1 bits (62), Expect = 4.8
Identities = 18/42 (42%), Positives = 20/42 (47%), Gaps = 5/42 (11%)
Frame = +3
Query: 618 RGNRCGRG-PAPSGTPWTSGPRGHSG----STARGRPCPAAA 728
+G + RG P PSG P GP G G S G P PA A
Sbjct: 192 QGGQRSRGTPGPSGAPGPQGPAGGPGQPGQSGGAGAPGPAGA 233
Score = 28.7 bits (61), Expect = 6.3
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
Frame = +3
Query: 639 GPAPSGTPWTSGPRGHSGST---ARGRPCPAAA 728
GP +GTP T G G++G+ A PCPA A
Sbjct: 239 GPGNAGTPGTPGAPGNAGAPGGDAAYCPCPARA 271
>Z67738-4|CAJ43444.1| 279|Caenorhabditis elegans Hypothetical
protein W03G11.1b protein.
Length = 279
Score = 29.1 bits (62), Expect = 4.8
Identities = 16/45 (35%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
Frame = +3
Query: 621 GNRCGRGP-APSGTPWTSGPRGHSGSTARGRPCPAAAGHDSSTTA 752
G R GP PSG P GP G G P+ AG + A
Sbjct: 168 GARGSPGPRGPSGNPGADGPAGQLGPQGGSNVAPSPAGEPGAPGA 212
>Z67738-3|CAA91544.2| 332|Caenorhabditis elegans Hypothetical
protein W03G11.1a protein.
Length = 332
Score = 29.1 bits (62), Expect = 4.8
Identities = 16/45 (35%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
Frame = +3
Query: 621 GNRCGRGP-APSGTPWTSGPRGHSGSTARGRPCPAAAGHDSSTTA 752
G R GP PSG P GP G G P+ AG + A
Sbjct: 221 GARGSPGPRGPSGNPGADGPAGQLGPQGGSNVAPSPAGEPGAPGA 265
>U50312-9|AAA92325.1| 294|Caenorhabditis elegans Collagen protein
10 protein.
Length = 294
Score = 29.1 bits (62), Expect = 4.8
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = +3
Query: 618 RGNRCGRGPAPSGTPWTSGPRGHSGSTAR-GRPCPAA-AGHDSS 743
RG+ GP G +GP G G+ + G+P PA AG D +
Sbjct: 212 RGSGAPGGPGAPGNAGPAGPAGQDGAPGQDGQPGPAGPAGQDGA 255
>U50312-7|AAA92323.2| 306|Caenorhabditis elegans Collagen protein
144 protein.
Length = 306
Score = 29.1 bits (62), Expect = 4.8
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = +3
Query: 618 RGNRCGRGPAPSGTPWTSGPRGHSGSTAR-GRPCPAA-AGHDSS 743
RG+ GP G +GP G G+ + G+P PA AG D +
Sbjct: 224 RGSGAPGGPGAPGNAGPAGPAGQDGAPGQDGQPGPAGPAGQDGA 267
>AF016687-1|AAC48094.2| 315|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 9 protein.
Length = 315
Score = 29.1 bits (62), Expect = 4.8
Identities = 17/37 (45%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = +3
Query: 609 TLDRGNRC-GRGPAPSGTPWTSGPRGHSGSTAR-GRP 713
T DRG G P P+G P GPRG SG G+P
Sbjct: 196 TGDRGKVLNGAPPGPTGPPGKVGPRGLSGGKGHDGKP 232
>AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily
assigned gene nameprotein 262 protein.
Length = 302
Score = 29.1 bits (62), Expect = 4.8
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Frame = -3
Query: 888 FQKFGTVXEC--DIVRXYGFVHLDATGDVNDAIKELNGMMVDGQPMKVQLSTSRVR 727
FQK V E + + YGFV + D A++E++G V +P+K++ S + R
Sbjct: 229 FQKAKVVRESRTNKSKGYGFVSFRDSEDYVRAMREMDGKYVGNRPIKLRKSAWKER 284
>Z81567-3|CAB04587.1| 301|Caenorhabditis elegans Hypothetical
protein K08C9.4 protein.
Length = 301
Score = 28.7 bits (61), Expect = 6.3
Identities = 15/40 (37%), Positives = 16/40 (40%), Gaps = 2/40 (5%)
Frame = +3
Query: 642 PAPSGTPWTSGPRGHSGSTARGRP--CPAAAGHDSSTTAP 755
P P G P GP G G+ P AAG D AP
Sbjct: 154 PGPDGQPGQDGPAGIDGAPGEAGPQGDAGAAGQDGEAGAP 193
>Z68297-6|CAE45045.1| 302|Caenorhabditis elegans Hypothetical
protein F11A10.8 protein.
Length = 302
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/47 (27%), Positives = 21/47 (44%)
Frame = -3
Query: 789 LNGMMVDGQPMKVQLSTSRVRQRPGMGDPEQCYRCGRGGHWSKECPK 649
L G Q ++ S + + + D CY+CG GH++ C K
Sbjct: 222 LPGQTRQNQDHHHRVDLSLIPDKKNLSDVT-CYKCGEKGHYANRCHK 267
>Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical
protein C53B4.5 protein.
Length = 289
Score = 28.7 bits (61), Expect = 6.3
Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Frame = +3
Query: 621 GNRCGRGP-APSGTPWTSGPRGHSGSTARGRPCPAAAGHDSSTTAP 755
GN+ GP P G P +GP G +G G P P + G P
Sbjct: 174 GNKGPAGPPGPGGKPGPAGPPGENG--RNGEPQPGSPGEPGRPGQP 217
>U80847-7|AAO91744.1| 778|Caenorhabditis elegans Hypothetical
protein C17H11.6c protein.
Length = 778
Score = 28.7 bits (61), Expect = 6.3
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -3
Query: 726 QRPGMGDPEQCYRCGRGGHWSKECPKALGPDRNGFRDRAF 607
QRP G CY C R H ++ C +A P++ R AF
Sbjct: 196 QRPDCGTLF-CYHCKREWHSNQTCDEARRPEKRKSRGLAF 234
>U80847-6|AAK68190.1| 796|Caenorhabditis elegans Hypothetical
protein C17H11.6b protein.
Length = 796
Score = 28.7 bits (61), Expect = 6.3
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -3
Query: 726 QRPGMGDPEQCYRCGRGGHWSKECPKALGPDRNGFRDRAF 607
QRP G CY C R H ++ C +A P++ R AF
Sbjct: 196 QRPDCGTLF-CYHCKREWHSNQTCDEARRPEKRKSRGLAF 234
>U80847-5|AAK68189.1| 793|Caenorhabditis elegans Hypothetical
protein C17H11.6a protein.
Length = 793
Score = 28.7 bits (61), Expect = 6.3
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -3
Query: 726 QRPGMGDPEQCYRCGRGGHWSKECPKALGPDRNGFRDRAF 607
QRP G CY C R H ++ C +A P++ R AF
Sbjct: 196 QRPDCGTLF-CYHCKREWHSNQTCDEARRPEKRKSRGLAF 234
>AL032625-2|CAB63351.1| 138|Caenorhabditis elegans Hypothetical
protein Y37H9A.6 protein.
Length = 138
Score = 28.7 bits (61), Expect = 6.3
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -1
Query: 476 DAIQLEEHHEGWNWADLEE 420
D +QL H+ W W +LE+
Sbjct: 96 DDVQLSHEHQNWKWCELED 114
>AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen
protein 142 protein.
Length = 325
Score = 28.7 bits (61), Expect = 6.3
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Frame = +3
Query: 621 GNRCGRG-PAPSGTPWTSGPRGHSGST-ARGRP-CPAAAGHDSS 743
G+ G G P P G P SG GHSG+ G P P + G D++
Sbjct: 223 GHSGGAGSPGPQGPPGPSGQPGHSGNDGVPGAPGNPGSPGGDAA 266
>Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical
protein T11F9.9 protein.
Length = 299
Score = 28.3 bits (60), Expect = 8.3
Identities = 15/38 (39%), Positives = 16/38 (42%)
Frame = +3
Query: 642 PAPSGTPWTSGPRGHSGSTARGRPCPAAAGHDSSTTAP 755
P P G P GP G SG A P + G D AP
Sbjct: 147 PCPQGPPGPPGPPGPSGD-AGSNGNPGSPGQDGQPGAP 183
>Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical
protein T05A1.2 protein.
Length = 300
Score = 28.3 bits (60), Expect = 8.3
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +3
Query: 639 GPAPSGTPWTSGPRGHSGSTARGRPCPAAAGH 734
GP G P GP GH G P P GH
Sbjct: 180 GPGQPGQPGPHGPNGHPGKPGSQGP-PGPPGH 210
>Z54238-5|CAA90997.1| 299|Caenorhabditis elegans Hypothetical
protein T28C6.6 protein.
Length = 299
Score = 28.3 bits (60), Expect = 8.3
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +3
Query: 630 CGRGPAPSGTPWTSGPRGHSGSTARGRPCPAAAGHDSSTTAP 755
C GPA G P +GP G +G+ P A G+D AP
Sbjct: 148 CPAGPA--GAPGPAGPAGDAGANGN----PGAPGNDGQPGAP 183
>Z54238-3|CAA90995.1| 299|Caenorhabditis elegans Hypothetical
protein T28C6.4 protein.
Length = 299
Score = 28.3 bits (60), Expect = 8.3
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +3
Query: 630 CGRGPAPSGTPWTSGPRGHSGSTARGRPCPAAAGHDSSTTAP 755
C GPA G P +GP G +G+ P A G+D AP
Sbjct: 148 CPAGPA--GAPGPAGPAGDAGANGN----PGAPGNDGQPGAP 183
>Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical
protein F17C8.2 protein.
Length = 296
Score = 28.3 bits (60), Expect = 8.3
Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +3
Query: 627 RCGRGPAPSGTPWTSGPRGHSGSTARGRP-CPAAAGHDSSTTAP 755
+C GPA G P GP G +GS G+P P AG D P
Sbjct: 146 KCPEGPA--GPPGPEGPAGPAGSD--GQPGAPGDAGKDGPPGPP 185
>U70849-7|AAF99925.2| 332|Caenorhabditis elegans Collagen protein
111 protein.
Length = 332
Score = 28.3 bits (60), Expect = 8.3
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +3
Query: 642 PAPSGTPWTSGPRGHSGSTARGRPCP 719
P P GTP G G GS A PCP
Sbjct: 257 PGPMGTPGGPGEPGIPGSDAAYCPCP 282
>U41624-5|AAF99941.1| 314|Caenorhabditis elegans Collagen protein
174 protein.
Length = 314
Score = 28.3 bits (60), Expect = 8.3
Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = +3
Query: 621 GNRCGRGPAPSGTPWTSGPRGHSGSTAR-GRPCPAAAGHDSSTTAPSW 761
G CG G +P G P G G +G+ G P ++T AP++
Sbjct: 117 GGCCGCGVSPQGPPGVPGRDGDNGADGEAGAPGKDGPDGPAATPAPNY 164
>L15419-1|AAA17726.1| 308|Caenorhabditis elegans col-40 collagen
protein.
Length = 308
Score = 28.3 bits (60), Expect = 8.3
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +3
Query: 639 GPA-PSGTPWTSGPRGHSGSTARGRPCPAAAGHDS 740
GPA +G P GP G+ GS P PA D+
Sbjct: 235 GPAGAAGPPGPPGPAGNPGSAGASEPGPAGPAGDA 269
>AY347576-1|AAP97870.1| 299|Caenorhabditis elegans COLlagen
structural gene, probablecuticle component, from embryo
to adult (28.7 kD) (col-3) protein.
Length = 299
Score = 28.3 bits (60), Expect = 8.3
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +3
Query: 630 CGRGPAPSGTPWTSGPRGHSGSTARGRPCPAAAGHDSSTTAP 755
C GPA G P +GP G +G+ P A G+D AP
Sbjct: 148 CPAGPA--GAPGPAGPAGDAGANGN----PGAPGNDGQPGAP 183
>AY347574-1|AAP97868.1| 299|Caenorhabditis elegans COLlagen
structural gene, probablecuticle component, from embryo
to adult (28.7 kD) (col-117) protein.
Length = 299
Score = 28.3 bits (60), Expect = 8.3
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +3
Query: 630 CGRGPAPSGTPWTSGPRGHSGSTARGRPCPAAAGHDSSTTAP 755
C GPA G P +GP G +G+ P A G+D AP
Sbjct: 148 CPAGPA--GAPGPAGPAGDAGANGN----PGAPGNDGQPGAP 183
>AL032654-7|CAA21719.1| 219|Caenorhabditis elegans Hypothetical
protein Y52B11A.5 protein.
Length = 219
Score = 28.3 bits (60), Expect = 8.3
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +1
Query: 286 WGASAAVHRIIGRSHGTHSAPQWR*IRHG 372
WG + VH+ + S TH P+W I HG
Sbjct: 167 WGVQSCVHQFVFPSGSTH--PRWPGIPHG 193
>AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen protein
40 protein.
Length = 416
Score = 28.3 bits (60), Expect = 8.3
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +3
Query: 639 GPA-PSGTPWTSGPRGHSGSTARGRPCPAAAGHDS 740
GPA +G P GP G+ GS P PA D+
Sbjct: 245 GPAGAAGPPGPPGPAGNPGSAGASEPGPAGPAGDA 279
>AC006770-1|AAF60594.1| 1365|Caenorhabditis elegans Hypothetical
protein Y46B2A.2 protein.
Length = 1365
Score = 28.3 bits (60), Expect = 8.3
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = -1
Query: 440 NWADLEELAVTSFL-RPYAA-NPCHPCLIYLHCGAEW 336
N +L + T+ + RPY A NP PC++ HC +
Sbjct: 527 NEPELHRIVTTAMMHRPYGAQNPHSPCMVDGHCSKRY 563
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,157,489
Number of Sequences: 27780
Number of extensions: 396433
Number of successful extensions: 2346
Number of sequences better than 10.0: 116
Number of HSP's better than 10.0 without gapping: 1546
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2266
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2402214122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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