Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_pT_F01
(886 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L07540-1|AAB09784.1| 340|Homo sapiens replication factor C, 36-... 349 8e-96
BC013961-1|AAH13961.1| 340|Homo sapiens replication factor C (a... 349 8e-96
BC001866-1|AAH01866.1| 340|Homo sapiens replication factor C (a... 349 8e-96
AY254323-1|AAO63493.1| 340|Homo sapiens replication factor C (a... 349 8e-96
CR407651-1|CAG28579.1| 340|Homo sapiens RFC5 protein. 346 6e-95
AB208992-1|BAD92229.1| 351|Homo sapiens replication factor C 5 ... 341 3e-93
M87339-1|AAB09785.1| 363|Homo sapiens replication factor C, 37-... 150 6e-36
CR536561-1|CAG38798.1| 363|Homo sapiens RFC4 protein. 150 6e-36
BT006987-1|AAP35633.1| 363|Homo sapiens replication factor C (a... 150 6e-36
BC024022-1|AAH24022.1| 363|Homo sapiens replication factor C (a... 150 6e-36
BC017452-1|AAH17452.1| 363|Homo sapiens replication factor C (a... 150 6e-36
AF538718-1|AAM97933.1| 363|Homo sapiens replication factor C (a... 150 6e-36
M87338-1|AAB09786.1| 354|Homo sapiens replication factor C, 40-... 146 1e-34
AF045555-4|AAC04860.1| 354|Homo sapiens replication factor C su... 146 1e-34
AC005081-1|AAP22334.1| 354|Homo sapiens unknown protein. 146 1e-34
BT007058-1|AAP35707.1| 320|Homo sapiens replication factor C (a... 107 7e-23
BC002813-1|AAH02813.1| 320|Homo sapiens replication factor C (a... 107 7e-23
AF483622-1|AAL82503.1| 320|Homo sapiens replication factor C (a... 107 7e-23
AC005081-2|AAP22335.1| 320|Homo sapiens unknown protein. 107 7e-23
L07541-1|AAB07268.1| 356|Homo sapiens replication factor C, 38-... 65 3e-10
BT019668-1|AAV38474.1| 356|Homo sapiens replication factor C (a... 65 3e-10
BC000149-1|AAH00149.1| 356|Homo sapiens replication factor C (a... 65 3e-10
AL139081-1|CAH70947.1| 356|Homo sapiens replication factor C (a... 65 3e-10
AF484446-1|AAL82505.1| 356|Homo sapiens replication factor C (a... 65 3e-10
AK222572-1|BAD96292.1| 356|Homo sapiens replication factor C 3 ... 64 5e-10
BC006437-1|AAH06437.1| 1016|Homo sapiens CHTF18 protein protein. 40 5e-07
BC018184-1|AAH18184.1| 975|Homo sapiens CTF18, chromosome trans... 40 5e-07
BC006278-1|AAH06278.2| 975|Homo sapiens CTF18, chromosome trans... 40 5e-07
AE006465-2|AAK61256.1| 1184|Homo sapiens some homology with holl... 35 1e-04
L23320-1|AAA16121.1| 1148|Homo sapiens replication factor C larg... 42 0.004
BC051786-1|AAH51786.1| 1148|Homo sapiens RFC1 protein protein. 42 0.004
BC051751-1|AAH51751.1| 1147|Homo sapiens replication factor C (a... 42 0.004
BC035297-1|AAH35297.1| 1148|Homo sapiens replication factor C (a... 42 0.004
AY600371-1|AAS94325.1| 1147|Homo sapiens replication factor C (a... 42 0.004
AL031033-2|CAB53056.1| 260|Homo sapiens protein ( Human DNA seq... 35 0.005
Z22642-1|CAA80355.1| 1147|Homo sapiens PO-GA protein. 40 0.009
AF040250-1|AAB99788.1| 1147|Homo sapiens DNA binding protein pro... 40 0.009
AK024476-1|BAB15766.1| 579|Homo sapiens FLJ00069 protein protein. 40 0.016
BC043423-1|AAH43423.1| 301|Homo sapiens ABCB6 protein protein. 34 0.60
BC000559-1|AAH00559.1| 842|Homo sapiens ATP-binding cassette, s... 34 0.60
AK172812-1|BAD18782.1| 571|Homo sapiens protein ( Homo sapiens ... 34 0.60
AK057026-1|BAB71347.1| 766|Homo sapiens protein ( Homo sapiens ... 34 0.60
AJ289233-1|CAB95766.2| 842|Homo sapiens ABC transporter umat pr... 34 0.60
AF308472-1|AAG33617.1| 896|Homo sapiens ATP-binding cassette ha... 34 0.60
AF076775-1|AAF75107.1| 842|Homo sapiens MT-ABC transporter prot... 34 0.60
AF070598-1|AAC28653.1| 511|Homo sapiens ABC transporter protein. 34 0.60
AB039371-1|BAA96733.1| 842|Homo sapiens mitochondrial ABC trans... 34 0.60
M22299-1|AAB02844.1| 570|Homo sapiens T-plastin polypeptide pro... 31 5.6
BC150494-1|AAI50495.1| 150|Homo sapiens Unknown (protein for IM... 31 5.6
BC056898-1|AAH56898.1| 630|Homo sapiens plastin 3 (T isoform) p... 31 5.6
BC039049-1|AAH39049.1| 630|Homo sapiens plastin 3 (T isoform) p... 31 5.6
BC008588-1|AAH08588.1| 409|Homo sapiens Similar to plastin 3 (T... 31 5.6
AL589842-1|CAI39884.1| 627|Homo sapiens plastin 3 (T isoform) p... 31 5.6
AK222801-1|BAD96521.1| 630|Homo sapiens plastin 3 variant protein. 31 5.6
BC060759-1|AAH60759.1| 1359|Homo sapiens MED23 protein protein. 31 7.3
AL121575-7|CAB92072.1| 1368|Homo sapiens cofactor required for S... 31 7.3
AL121575-6|CAI23321.1| 1374|Homo sapiens cofactor required for S... 31 7.3
AL121575-5|CAI23320.1| 1364|Homo sapiens cofactor required for S... 31 7.3
AL121575-4|CAI23319.1| 1365|Homo sapiens cofactor required for S... 31 7.3
AF135022-1|AAD30202.1| 1364|Homo sapiens mediator protein. 31 7.3
AF105332-1|AAD31729.1| 1368|Homo sapiens vitamin D3 receptor int... 31 7.3
AB033042-1|BAA86530.1| 1421|Homo sapiens KIAA1216 protein protein. 31 7.3
>L07540-1|AAB09784.1| 340|Homo sapiens replication factor C, 36-kDa
subunit protein.
Length = 340
Score = 349 bits (858), Expect = 8e-96
Identities = 164/261 (62%), Positives = 208/261 (79%)
Frame = -2
Query: 885 MYTPQQFSSMVLELNAXDDRGIGIVRGQILSFASTRTIFKAGPKLIILDEADAMTNDAQN 706
+Y ++F SMVLELNA DDRGI I+RG ILSFASTRTIFK G KL+ILDEADAMT DAQN
Sbjct: 77 LYKDKEFGSMVLELNASDDRGIDIIRGPILSFASTRTIFKKGFKLVILDEADAMTQDAQN 136
Query: 705 ALRRIIEKYTENVRFCIICNYLGKIIPALQSRCTRFRFAPLKQDQIVPRLQEIVTTEGVK 526
ALRR+IEK+TEN RFC+ICNYL KIIPALQSRCTRFRF PL + +VPRL+ +V E V
Sbjct: 137 ALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPELMVPRLEHVVEEEKVD 196
Query: 525 MSEGGMKALLTLSGGDMRKVLNTLQSTWLAYRDVTEDNVYTCVGHPLRADIDSILNWLLN 346
+SE GMKAL+TLS GDMR+ LN LQST +A+ VTE+ VYTC GHPL++DI +IL+W+LN
Sbjct: 197 ISEDGMKALVTLSSGDMRRALNILQSTNMAFGKVTEETVYTCTGHPLKSDIANILDWMLN 256
Query: 345 ENDFSACFKSIQDLKIAKGLALSDILAEVHTIIQRVKLPPEVLVSLLIKMSDAEARLASG 166
+ DF+ +++I +LK KGLAL DIL E+H + RV P V + LL KM+D E RL+ G
Sbjct: 257 Q-DFTTAYRNITELKTLKGLALHDILTEIHLFVHRVDFPSSVRIHLLTKMADIEYRLSVG 315
Query: 165 SSERVELAALIASFQIARDQV 103
++E+++L++LIA+FQ+ RD +
Sbjct: 316 TNEKIQLSSLIAAFQVTRDLI 336
>BC013961-1|AAH13961.1| 340|Homo sapiens replication factor C
(activator 1) 5, 36.5kDa protein.
Length = 340
Score = 349 bits (858), Expect = 8e-96
Identities = 164/261 (62%), Positives = 208/261 (79%)
Frame = -2
Query: 885 MYTPQQFSSMVLELNAXDDRGIGIVRGQILSFASTRTIFKAGPKLIILDEADAMTNDAQN 706
+Y ++F SMVLELNA DDRGI I+RG ILSFASTRTIFK G KL+ILDEADAMT DAQN
Sbjct: 77 LYKDKEFGSMVLELNASDDRGIDIIRGPILSFASTRTIFKKGFKLVILDEADAMTQDAQN 136
Query: 705 ALRRIIEKYTENVRFCIICNYLGKIIPALQSRCTRFRFAPLKQDQIVPRLQEIVTTEGVK 526
ALRR+IEK+TEN RFC+ICNYL KIIPALQSRCTRFRF PL + +VPRL+ +V E V
Sbjct: 137 ALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPELMVPRLEHVVEEEKVD 196
Query: 525 MSEGGMKALLTLSGGDMRKVLNTLQSTWLAYRDVTEDNVYTCVGHPLRADIDSILNWLLN 346
+SE GMKAL+TLS GDMR+ LN LQST +A+ VTE+ VYTC GHPL++DI +IL+W+LN
Sbjct: 197 ISEDGMKALVTLSSGDMRRALNILQSTNMAFGKVTEETVYTCTGHPLKSDIANILDWMLN 256
Query: 345 ENDFSACFKSIQDLKIAKGLALSDILAEVHTIIQRVKLPPEVLVSLLIKMSDAEARLASG 166
+ DF+ +++I +LK KGLAL DIL E+H + RV P V + LL KM+D E RL+ G
Sbjct: 257 Q-DFTTAYRNITELKTLKGLALHDILTEIHLFVHRVDFPSSVRIHLLTKMADIEYRLSVG 315
Query: 165 SSERVELAALIASFQIARDQV 103
++E+++L++LIA+FQ+ RD +
Sbjct: 316 TNEKIQLSSLIAAFQVTRDLI 336
>BC001866-1|AAH01866.1| 340|Homo sapiens replication factor C
(activator 1) 5, 36.5kDa protein.
Length = 340
Score = 349 bits (858), Expect = 8e-96
Identities = 164/261 (62%), Positives = 208/261 (79%)
Frame = -2
Query: 885 MYTPQQFSSMVLELNAXDDRGIGIVRGQILSFASTRTIFKAGPKLIILDEADAMTNDAQN 706
+Y ++F SMVLELNA DDRGI I+RG ILSFASTRTIFK G KL+ILDEADAMT DAQN
Sbjct: 77 LYKDKEFGSMVLELNASDDRGIDIIRGPILSFASTRTIFKKGFKLVILDEADAMTQDAQN 136
Query: 705 ALRRIIEKYTENVRFCIICNYLGKIIPALQSRCTRFRFAPLKQDQIVPRLQEIVTTEGVK 526
ALRR+IEK+TEN RFC+ICNYL KIIPALQSRCTRFRF PL + +VPRL+ +V E V
Sbjct: 137 ALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPELMVPRLEHVVEEEKVD 196
Query: 525 MSEGGMKALLTLSGGDMRKVLNTLQSTWLAYRDVTEDNVYTCVGHPLRADIDSILNWLLN 346
+SE GMKAL+TLS GDMR+ LN LQST +A+ VTE+ VYTC GHPL++DI +IL+W+LN
Sbjct: 197 ISEDGMKALVTLSSGDMRRALNILQSTNMAFGKVTEETVYTCTGHPLKSDIANILDWMLN 256
Query: 345 ENDFSACFKSIQDLKIAKGLALSDILAEVHTIIQRVKLPPEVLVSLLIKMSDAEARLASG 166
+ DF+ +++I +LK KGLAL DIL E+H + RV P V + LL KM+D E RL+ G
Sbjct: 257 Q-DFTTAYRNITELKTLKGLALHDILTEIHLFVHRVDFPSSVRIHLLTKMADIEYRLSVG 315
Query: 165 SSERVELAALIASFQIARDQV 103
++E+++L++LIA+FQ+ RD +
Sbjct: 316 TNEKIQLSSLIAAFQVTRDLI 336
>AY254323-1|AAO63493.1| 340|Homo sapiens replication factor C
(activator 1) 5, 36.5kDa protein.
Length = 340
Score = 349 bits (858), Expect = 8e-96
Identities = 164/261 (62%), Positives = 208/261 (79%)
Frame = -2
Query: 885 MYTPQQFSSMVLELNAXDDRGIGIVRGQILSFASTRTIFKAGPKLIILDEADAMTNDAQN 706
+Y ++F SMVLELNA DDRGI I+RG ILSFASTRTIFK G KL+ILDEADAMT DAQN
Sbjct: 77 LYKDKEFGSMVLELNASDDRGIDIIRGPILSFASTRTIFKKGFKLVILDEADAMTQDAQN 136
Query: 705 ALRRIIEKYTENVRFCIICNYLGKIIPALQSRCTRFRFAPLKQDQIVPRLQEIVTTEGVK 526
ALRR+IEK+TEN RFC+ICNYL KIIPALQSRCTRFRF PL + +VPRL+ +V E V
Sbjct: 137 ALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPELMVPRLEHVVEEEKVD 196
Query: 525 MSEGGMKALLTLSGGDMRKVLNTLQSTWLAYRDVTEDNVYTCVGHPLRADIDSILNWLLN 346
+SE GMKAL+TLS GDMR+ LN LQST +A+ VTE+ VYTC GHPL++DI +IL+W+LN
Sbjct: 197 ISEDGMKALVTLSSGDMRRALNILQSTNMAFGKVTEETVYTCTGHPLKSDIANILDWMLN 256
Query: 345 ENDFSACFKSIQDLKIAKGLALSDILAEVHTIIQRVKLPPEVLVSLLIKMSDAEARLASG 166
+ DF+ +++I +LK KGLAL DIL E+H + RV P V + LL KM+D E RL+ G
Sbjct: 257 Q-DFTTAYRNITELKTLKGLALHDILTEIHLFVHRVDFPSSVRIHLLTKMADIEYRLSVG 315
Query: 165 SSERVELAALIASFQIARDQV 103
++E+++L++LIA+FQ+ RD +
Sbjct: 316 TNEKIQLSSLIAAFQVTRDLI 336
>CR407651-1|CAG28579.1| 340|Homo sapiens RFC5 protein.
Length = 340
Score = 346 bits (851), Expect = 6e-95
Identities = 163/261 (62%), Positives = 207/261 (79%)
Frame = -2
Query: 885 MYTPQQFSSMVLELNAXDDRGIGIVRGQILSFASTRTIFKAGPKLIILDEADAMTNDAQN 706
+Y ++F SMVLELNA DDRGI I+RG ILSFASTRTIFK G KL+ILDEADAMT DAQN
Sbjct: 77 LYKDKEFGSMVLELNASDDRGIDIIRGPILSFASTRTIFKKGFKLVILDEADAMTQDAQN 136
Query: 705 ALRRIIEKYTENVRFCIICNYLGKIIPALQSRCTRFRFAPLKQDQIVPRLQEIVTTEGVK 526
ALR +IEK+TEN RFC+ICNYL KIIPALQSRCTRFRF PL + +VPRL+ +V E V
Sbjct: 137 ALRGVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPELMVPRLEHVVEEEKVD 196
Query: 525 MSEGGMKALLTLSGGDMRKVLNTLQSTWLAYRDVTEDNVYTCVGHPLRADIDSILNWLLN 346
+SE GMKAL+TLS GDMR+ LN LQST +A+ VTE+ VYTC GHPL++DI +IL+W+LN
Sbjct: 197 ISEDGMKALVTLSSGDMRRALNILQSTNMAFGKVTEETVYTCTGHPLKSDIANILDWMLN 256
Query: 345 ENDFSACFKSIQDLKIAKGLALSDILAEVHTIIQRVKLPPEVLVSLLIKMSDAEARLASG 166
+ DF+ +++I +LK KGLAL DIL E+H + RV P V + LL KM+D E RL+ G
Sbjct: 257 Q-DFTTAYRNITELKTLKGLALHDILTEIHLFVHRVDFPSSVRIHLLTKMADIEYRLSVG 315
Query: 165 SSERVELAALIASFQIARDQV 103
++E+++L++LIA+FQ+ RD +
Sbjct: 316 TNEKIQLSSLIAAFQVTRDLI 336
>AB208992-1|BAD92229.1| 351|Homo sapiens replication factor C 5
isoform 1 variant protein.
Length = 351
Score = 341 bits (837), Expect = 3e-93
Identities = 163/261 (62%), Positives = 205/261 (78%)
Frame = -2
Query: 885 MYTPQQFSSMVLELNAXDDRGIGIVRGQILSFASTRTIFKAGPKLIILDEADAMTNDAQN 706
+Y ++F SMVLELNA DDRGI I+RG ILSFASTRTIFK G KL+ILDEADAMT DAQN
Sbjct: 91 LYKDKEFGSMVLELNASDDRGIDIIRGPILSFASTRTIFKKGFKLVILDEADAMTQDAQN 150
Query: 705 ALRRIIEKYTENVRFCIICNYLGKIIPALQSRCTRFRFAPLKQDQIVPRLQEIVTTEGVK 526
ALRR+IEK+TEN RFC+ICNYL KIIPALQSRCTRFRF PL + +VPRL+ +V E V
Sbjct: 151 ALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPELMVPRLEHVVEEEKVD 210
Query: 525 MSEGGMKALLTLSGGDMRKVLNTLQSTWLAYRDVTEDNVYTCVGHPLRADIDSILNWLLN 346
+SE GMKAL+TLS GDMR+ LN LQST +A+ VTE+ VYTC GHPL++DI +IL+W+LN
Sbjct: 211 ISEDGMKALVTLSSGDMRRALNILQSTNMAFGKVTEETVYTCTGHPLKSDIANILDWMLN 270
Query: 345 ENDFSACFKSIQDLKIAKGLALSDILAEVHTIIQRVKLPPEVLVSLLIKMSDAEARLASG 166
+ DF+ ++ LK KGLAL DIL E+H + RV P V + LL KM+D E RL+ G
Sbjct: 271 Q-DFTTAYRK---LKTLKGLALHDILTEIHLFVHRVDFPSSVRIHLLTKMADIEYRLSVG 326
Query: 165 SSERVELAALIASFQIARDQV 103
++E+++L++LIA+FQ+ RD +
Sbjct: 327 TNEKIQLSSLIAAFQVTRDLI 347
>M87339-1|AAB09785.1| 363|Homo sapiens replication factor C, 37-kDa
subunit protein.
Length = 363
Score = 150 bits (364), Expect = 6e-36
Identities = 92/262 (35%), Positives = 148/262 (56%), Gaps = 9/262 (3%)
Frame = -2
Query: 885 MYTPQQFSSMVLELNAXDDRGIGIVRGQILSFAS-----TRTIFKAGP--KLIILDEADA 727
++ P+ F VLELNA D+RGI +VR ++ +FA +R+ K P K++ILDEAD+
Sbjct: 95 LFGPELFRLRVLELNASDERGIQVVREKVKNFAQLTVSGSRSDGKPCPPFKIVILDEADS 154
Query: 726 MTNDAQNALRRIIEKYTENVRFCIICNYLGKIIPALQSRCTRFRFAPLKQDQIVPRLQEI 547
MT+ AQ ALRR +EK ++ RFC+ICNY+ +II L SRC++FRF PL RL +I
Sbjct: 155 MTSAAQAALRRTMEKESKTTRFCLICNYVSRIIEPLTSRCSKFRFKPLSDKIQQQRLLDI 214
Query: 546 VTTEGVKMSEGGMKALLTLSGGDMRKVLNTLQST--WLAYRDVTEDNVYTCVGHPLRADI 373
E VK+S+ G+ L+ +S GD+RK + LQS +++TE + G I
Sbjct: 215 AKKENVKISDEGIAYLVKVSEGDLRKAITFLQSATRLTGGKEITEKVITDIAGVIPAEKI 274
Query: 372 DSILNWLLNENDFSACFKSIQDLKIAKGLALSDILAEVHTIIQRVKLPPEVLVSLLIKMS 193
D + F ++DL I +G A + ++ ++H ++ L + + K++
Sbjct: 275 DGVFA-ACQSGSFDKLEAVVKDL-IDEGHAATQLVNQLHDVVVENNLSDKQKSIITEKLA 332
Query: 192 DAEARLASGSSERVELAALIAS 127
+ + LA G+ E ++L +L A+
Sbjct: 333 EVDKCLADGADEHLQLISLCAT 354
>CR536561-1|CAG38798.1| 363|Homo sapiens RFC4 protein.
Length = 363
Score = 150 bits (364), Expect = 6e-36
Identities = 92/262 (35%), Positives = 148/262 (56%), Gaps = 9/262 (3%)
Frame = -2
Query: 885 MYTPQQFSSMVLELNAXDDRGIGIVRGQILSFAS-----TRTIFKAGP--KLIILDEADA 727
++ P+ F VLELNA D+RGI +VR ++ +FA +R+ K P K++ILDEAD+
Sbjct: 95 LFGPELFRLRVLELNASDERGIQVVREKVKNFAQLTVSGSRSDGKPCPPFKIVILDEADS 154
Query: 726 MTNDAQNALRRIIEKYTENVRFCIICNYLGKIIPALQSRCTRFRFAPLKQDQIVPRLQEI 547
MT+ AQ ALRR +EK ++ RFC+ICNY+ +II L SRC++FRF PL RL +I
Sbjct: 155 MTSAAQAALRRTMEKESKTTRFCLICNYVSRIIEPLTSRCSKFRFKPLSDKIQQQRLLDI 214
Query: 546 VTTEGVKMSEGGMKALLTLSGGDMRKVLNTLQST--WLAYRDVTEDNVYTCVGHPLRADI 373
E VK+S+ G+ L+ +S GD+RK + LQS +++TE + G I
Sbjct: 215 AKKENVKISDEGIAYLVKVSEGDLRKAITFLQSATRLTGGKEITEKVITDIAGVIPAEKI 274
Query: 372 DSILNWLLNENDFSACFKSIQDLKIAKGLALSDILAEVHTIIQRVKLPPEVLVSLLIKMS 193
D + F ++DL I +G A + ++ ++H ++ L + + K++
Sbjct: 275 DGVFA-ACQSGSFDKLEAVVKDL-IDEGHAATQLVNQLHDVVVENNLSDKQKSIITEKLA 332
Query: 192 DAEARLASGSSERVELAALIAS 127
+ + LA G+ E ++L +L A+
Sbjct: 333 EVDKCLADGADEHLQLISLCAT 354
>BT006987-1|AAP35633.1| 363|Homo sapiens replication factor C
(activator 1) 4, 37kDa protein.
Length = 363
Score = 150 bits (364), Expect = 6e-36
Identities = 92/262 (35%), Positives = 148/262 (56%), Gaps = 9/262 (3%)
Frame = -2
Query: 885 MYTPQQFSSMVLELNAXDDRGIGIVRGQILSFAS-----TRTIFKAGP--KLIILDEADA 727
++ P+ F VLELNA D+RGI +VR ++ +FA +R+ K P K++ILDEAD+
Sbjct: 95 LFGPELFRLRVLELNASDERGIQVVREKVKNFAQLTVSGSRSDGKPCPPFKIVILDEADS 154
Query: 726 MTNDAQNALRRIIEKYTENVRFCIICNYLGKIIPALQSRCTRFRFAPLKQDQIVPRLQEI 547
MT+ AQ ALRR +EK ++ RFC+ICNY+ +II L SRC++FRF PL RL +I
Sbjct: 155 MTSAAQAALRRTMEKESKTTRFCLICNYVSRIIEPLTSRCSKFRFKPLSDKIQQQRLLDI 214
Query: 546 VTTEGVKMSEGGMKALLTLSGGDMRKVLNTLQST--WLAYRDVTEDNVYTCVGHPLRADI 373
E VK+S+ G+ L+ +S GD+RK + LQS +++TE + G I
Sbjct: 215 AKKENVKISDEGIAYLVKVSEGDLRKAITFLQSATRLTGGKEITEKVITDIAGVIPAEKI 274
Query: 372 DSILNWLLNENDFSACFKSIQDLKIAKGLALSDILAEVHTIIQRVKLPPEVLVSLLIKMS 193
D + F ++DL I +G A + ++ ++H ++ L + + K++
Sbjct: 275 DGVFA-ACQSGSFDKLEAVVKDL-IDEGHAATQLVNQLHDVVVENNLSDKQKSIITEKLA 332
Query: 192 DAEARLASGSSERVELAALIAS 127
+ + LA G+ E ++L +L A+
Sbjct: 333 EVDKCLADGADEHLQLISLCAT 354
>BC024022-1|AAH24022.1| 363|Homo sapiens replication factor C
(activator 1) 4, 37kDa protein.
Length = 363
Score = 150 bits (364), Expect = 6e-36
Identities = 92/262 (35%), Positives = 148/262 (56%), Gaps = 9/262 (3%)
Frame = -2
Query: 885 MYTPQQFSSMVLELNAXDDRGIGIVRGQILSFAS-----TRTIFKAGP--KLIILDEADA 727
++ P+ F VLELNA D+RGI +VR ++ +FA +R+ K P K++ILDEAD+
Sbjct: 95 LFGPELFRLRVLELNASDERGIQVVREKVKNFAQLTVSGSRSDGKPCPPFKIVILDEADS 154
Query: 726 MTNDAQNALRRIIEKYTENVRFCIICNYLGKIIPALQSRCTRFRFAPLKQDQIVPRLQEI 547
MT+ AQ ALRR +EK ++ RFC+ICNY+ +II L SRC++FRF PL RL +I
Sbjct: 155 MTSAAQAALRRTMEKESKTTRFCLICNYVSRIIEPLTSRCSKFRFKPLSDKIQQQRLLDI 214
Query: 546 VTTEGVKMSEGGMKALLTLSGGDMRKVLNTLQST--WLAYRDVTEDNVYTCVGHPLRADI 373
E VK+S+ G+ L+ +S GD+RK + LQS +++TE + G I
Sbjct: 215 AKKENVKISDEGIAYLVKVSEGDLRKAITFLQSATRLTGGKEITEKVITDIAGVIPAEKI 274
Query: 372 DSILNWLLNENDFSACFKSIQDLKIAKGLALSDILAEVHTIIQRVKLPPEVLVSLLIKMS 193
D + F ++DL I +G A + ++ ++H ++ L + + K++
Sbjct: 275 DGVFA-ACQSGSFDKLEAVVKDL-IDEGHAATQLVNQLHDVVVENNLSDKQKSIITEKLA 332
Query: 192 DAEARLASGSSERVELAALIAS 127
+ + LA G+ E ++L +L A+
Sbjct: 333 EVDKCLADGADEHLQLISLCAT 354
>BC017452-1|AAH17452.1| 363|Homo sapiens replication factor C
(activator 1) 4, 37kDa protein.
Length = 363
Score = 150 bits (364), Expect = 6e-36
Identities = 92/262 (35%), Positives = 148/262 (56%), Gaps = 9/262 (3%)
Frame = -2
Query: 885 MYTPQQFSSMVLELNAXDDRGIGIVRGQILSFAS-----TRTIFKAGP--KLIILDEADA 727
++ P+ F VLELNA D+RGI +VR ++ +FA +R+ K P K++ILDEAD+
Sbjct: 95 LFGPELFRLRVLELNASDERGIQVVREKVKNFAQLTVSGSRSDGKPCPPFKIVILDEADS 154
Query: 726 MTNDAQNALRRIIEKYTENVRFCIICNYLGKIIPALQSRCTRFRFAPLKQDQIVPRLQEI 547
MT+ AQ ALRR +EK ++ RFC+ICNY+ +II L SRC++FRF PL RL +I
Sbjct: 155 MTSAAQAALRRTMEKESKTTRFCLICNYVSRIIEPLTSRCSKFRFKPLSDKIQQQRLLDI 214
Query: 546 VTTEGVKMSEGGMKALLTLSGGDMRKVLNTLQST--WLAYRDVTEDNVYTCVGHPLRADI 373
E VK+S+ G+ L+ +S GD+RK + LQS +++TE + G I
Sbjct: 215 AKKENVKISDEGIAYLVKVSEGDLRKAITFLQSATRLTGGKEITEKVITDIAGVIPAEKI 274
Query: 372 DSILNWLLNENDFSACFKSIQDLKIAKGLALSDILAEVHTIIQRVKLPPEVLVSLLIKMS 193
D + F ++DL I +G A + ++ ++H ++ L + + K++
Sbjct: 275 DGVFA-ACQSGSFDKLEAVVKDL-IDEGHAATQLVNQLHDVVVENNLSDKQKSIITEKLA 332
Query: 192 DAEARLASGSSERVELAALIAS 127
+ + LA G+ E ++L +L A+
Sbjct: 333 EVDKCLADGADEHLQLISLCAT 354
>AF538718-1|AAM97933.1| 363|Homo sapiens replication factor C
(activator 1) 4 (37kD) protein.
Length = 363
Score = 150 bits (364), Expect = 6e-36
Identities = 92/262 (35%), Positives = 148/262 (56%), Gaps = 9/262 (3%)
Frame = -2
Query: 885 MYTPQQFSSMVLELNAXDDRGIGIVRGQILSFAS-----TRTIFKAGP--KLIILDEADA 727
++ P+ F VLELNA D+RGI +VR ++ +FA +R+ K P K++ILDEAD+
Sbjct: 95 LFGPELFRLRVLELNASDERGIQVVREKVKNFAQLTVSGSRSDGKPCPPFKIVILDEADS 154
Query: 726 MTNDAQNALRRIIEKYTENVRFCIICNYLGKIIPALQSRCTRFRFAPLKQDQIVPRLQEI 547
MT+ AQ ALRR +EK ++ RFC+ICNY+ +II L SRC++FRF PL RL +I
Sbjct: 155 MTSAAQAALRRTMEKESKTTRFCLICNYVSRIIEPLTSRCSKFRFKPLSDKIQQQRLLDI 214
Query: 546 VTTEGVKMSEGGMKALLTLSGGDMRKVLNTLQST--WLAYRDVTEDNVYTCVGHPLRADI 373
E VK+S+ G+ L+ +S GD+RK + LQS +++TE + G I
Sbjct: 215 AKKENVKISDEGIAYLVKVSEGDLRKAITFLQSATRLTGGKEITEKVITDIAGVIPAEKI 274
Query: 372 DSILNWLLNENDFSACFKSIQDLKIAKGLALSDILAEVHTIIQRVKLPPEVLVSLLIKMS 193
D + F ++DL I +G A + ++ ++H ++ L + + K++
Sbjct: 275 DGVFA-ACQSGSFDKLEAVVKDL-IDEGHAATQLVNQLHDVVVENNLSDKQKSIITEKLA 332
Query: 192 DAEARLASGSSERVELAALIAS 127
+ + LA G+ E ++L +L A+
Sbjct: 333 EVDKCLADGADEHLQLISLCAT 354
>M87338-1|AAB09786.1| 354|Homo sapiens replication factor C, 40-kDa
subunit protein.
Length = 354
Score = 146 bits (353), Expect = 1e-34
Identities = 80/243 (32%), Positives = 136/243 (55%), Gaps = 1/243 (0%)
Frame = -2
Query: 855 VLELNAXDDRGIGIVRGQILSFASTR-TIFKAGPKLIILDEADAMTNDAQNALRRIIEKY 679
+LELNA +DRGI +VR +I FA + T+ K K+IILDEAD+MT+ AQ ALRR +E Y
Sbjct: 102 MLELNASNDRGIDVVRNKIKMFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIY 161
Query: 678 TENVRFCIICNYLGKIIPALQSRCTRFRFAPLKQDQIVPRLQEIVTTEGVKMSEGGMKAL 499
++ RF + CN KII +QSRC R+ L QI+ RL ++ E V ++ G++A+
Sbjct: 162 SKTTRFALACNASDKIIEPIQSRCAVLRYTKLTDAQILTRLMNVIEKERVPYTDDGLEAI 221
Query: 498 LTLSGGDMRKVLNTLQSTWLAYRDVTEDNVYTCVGHPLRADIDSILNWLLNENDFSACFK 319
+ + GDMR+ LN LQST+ + + +NV+ P + ++ +N N +K
Sbjct: 222 IFTAQGDMRQALNNLQSTFSGFGFINSENVFKVCDEPHPLLVKEMIQHCVNAN-IDEAYK 280
Query: 318 SIQDLKIAKGLALSDILAEVHTIIQRVKLPPEVLVSLLIKMSDAEARLASGSSERVELAA 139
+ L G + DI+ + + + ++ + + + ++ ++A G + +++A
Sbjct: 281 ILAHL-WHLGYSPEDIIGNIFRVCKTFQMAEYLKLEFIKEIGYTHMKIAEGVNSLLQMAG 339
Query: 138 LIA 130
L+A
Sbjct: 340 LLA 342
>AF045555-4|AAC04860.1| 354|Homo sapiens replication factor C
subunit 2 protein.
Length = 354
Score = 146 bits (353), Expect = 1e-34
Identities = 80/243 (32%), Positives = 136/243 (55%), Gaps = 1/243 (0%)
Frame = -2
Query: 855 VLELNAXDDRGIGIVRGQILSFASTR-TIFKAGPKLIILDEADAMTNDAQNALRRIIEKY 679
+LELNA +DRGI +VR +I FA + T+ K K+IILDEAD+MT+ AQ ALRR +E Y
Sbjct: 102 MLELNASNDRGIDVVRNKIKMFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIY 161
Query: 678 TENVRFCIICNYLGKIIPALQSRCTRFRFAPLKQDQIVPRLQEIVTTEGVKMSEGGMKAL 499
++ RF + CN KII +QSRC R+ L QI+ RL ++ E V ++ G++A+
Sbjct: 162 SKTTRFALACNASDKIIEPIQSRCAVLRYTKLTDAQILTRLMNVIEKERVPYTDDGLEAI 221
Query: 498 LTLSGGDMRKVLNTLQSTWLAYRDVTEDNVYTCVGHPLRADIDSILNWLLNENDFSACFK 319
+ + GDMR+ LN LQST+ + + +NV+ P + ++ +N N +K
Sbjct: 222 IFTAQGDMRQALNNLQSTFSGFGFINSENVFKVCDEPHPLLVKEMIQHCVNAN-IDEAYK 280
Query: 318 SIQDLKIAKGLALSDILAEVHTIIQRVKLPPEVLVSLLIKMSDAEARLASGSSERVELAA 139
+ L G + DI+ + + + ++ + + + ++ ++A G + +++A
Sbjct: 281 ILAHL-WHLGYSPEDIIGNIFRVCKTFQMAEYLKLEFIKEIGYTHMKIAEGVNSLLQMAG 339
Query: 138 LIA 130
L+A
Sbjct: 340 LLA 342
>AC005081-1|AAP22334.1| 354|Homo sapiens unknown protein.
Length = 354
Score = 146 bits (353), Expect = 1e-34
Identities = 80/243 (32%), Positives = 136/243 (55%), Gaps = 1/243 (0%)
Frame = -2
Query: 855 VLELNAXDDRGIGIVRGQILSFASTR-TIFKAGPKLIILDEADAMTNDAQNALRRIIEKY 679
+LELNA +DRGI +VR +I FA + T+ K K+IILDEAD+MT+ AQ ALRR +E Y
Sbjct: 102 MLELNASNDRGIDVVRNKIKMFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIY 161
Query: 678 TENVRFCIICNYLGKIIPALQSRCTRFRFAPLKQDQIVPRLQEIVTTEGVKMSEGGMKAL 499
++ RF + CN KII +QSRC R+ L QI+ RL ++ E V ++ G++A+
Sbjct: 162 SKTTRFALACNASDKIIEPIQSRCAVLRYTKLTDAQILTRLMNVIEKERVPYTDDGLEAI 221
Query: 498 LTLSGGDMRKVLNTLQSTWLAYRDVTEDNVYTCVGHPLRADIDSILNWLLNENDFSACFK 319
+ + GDMR+ LN LQST+ + + +NV+ P + ++ +N N +K
Sbjct: 222 IFTAQGDMRQALNNLQSTFSGFGFINSENVFKVCDEPHPLLVKEMIQHCVNAN-IDEAYK 280
Query: 318 SIQDLKIAKGLALSDILAEVHTIIQRVKLPPEVLVSLLIKMSDAEARLASGSSERVELAA 139
+ L G + DI+ + + + ++ + + + ++ ++A G + +++A
Sbjct: 281 ILAHL-WHLGYSPEDIIGNIFRVCKTFQMAEYLKLEFIKEIGYTHMKIAEGVNSLLQMAG 339
Query: 138 LIA 130
L+A
Sbjct: 340 LLA 342
>BT007058-1|AAP35707.1| 320|Homo sapiens replication factor C
(activator 1) 2, 40kDa protein.
Length = 320
Score = 107 bits (256), Expect = 7e-23
Identities = 57/201 (28%), Positives = 106/201 (52%)
Frame = -2
Query: 732 DAMTNDAQNALRRIIEKYTENVRFCIICNYLGKIIPALQSRCTRFRFAPLKQDQIVPRLQ 553
D+MT+ AQ ALRR +E Y++ RF + CN KII +QSRC R+ L QI+ RL
Sbjct: 110 DSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQSRCAVLRYTKLTDAQILTRLM 169
Query: 552 EIVTTEGVKMSEGGMKALLTLSGGDMRKVLNTLQSTWLAYRDVTEDNVYTCVGHPLRADI 373
++ E V ++ G++A++ + GDMR+ LN LQST+ + + +NV+ P +
Sbjct: 170 NVIEKERVPYTDDGLEAIIFTAQGDMRQALNNLQSTFSGFGFINSENVFKVCDEPHPLLV 229
Query: 372 DSILNWLLNENDFSACFKSIQDLKIAKGLALSDILAEVHTIIQRVKLPPEVLVSLLIKMS 193
++ +N N +K + L G + DI+ + + + ++ + + + ++
Sbjct: 230 KEMIQHCVNAN-IDEAYKILAHL-WHLGYSPEDIIGNIFRVCKTFQMAEYLKLEFIKEIG 287
Query: 192 DAEARLASGSSERVELAALIA 130
++A G + +++A L+A
Sbjct: 288 YTHMKIAEGVNSLLQMAGLLA 308
>BC002813-1|AAH02813.1| 320|Homo sapiens replication factor C
(activator 1) 2, 40kDa protein.
Length = 320
Score = 107 bits (256), Expect = 7e-23
Identities = 57/201 (28%), Positives = 106/201 (52%)
Frame = -2
Query: 732 DAMTNDAQNALRRIIEKYTENVRFCIICNYLGKIIPALQSRCTRFRFAPLKQDQIVPRLQ 553
D+MT+ AQ ALRR +E Y++ RF + CN KII +QSRC R+ L QI+ RL
Sbjct: 110 DSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQSRCAVLRYTKLTDAQILTRLM 169
Query: 552 EIVTTEGVKMSEGGMKALLTLSGGDMRKVLNTLQSTWLAYRDVTEDNVYTCVGHPLRADI 373
++ E V ++ G++A++ + GDMR+ LN LQST+ + + +NV+ P +
Sbjct: 170 NVIEKERVPYTDDGLEAIIFTAQGDMRQALNNLQSTFSGFGFINSENVFKVCDEPHPLLV 229
Query: 372 DSILNWLLNENDFSACFKSIQDLKIAKGLALSDILAEVHTIIQRVKLPPEVLVSLLIKMS 193
++ +N N +K + L G + DI+ + + + ++ + + + ++
Sbjct: 230 KEMIQHCVNAN-IDEAYKILAHL-WHLGYSPEDIIGNIFRVCKTFQMAEYLKLEFIKEIG 287
Query: 192 DAEARLASGSSERVELAALIA 130
++A G + +++A L+A
Sbjct: 288 YTHMKIAEGVNSLLQMAGLLA 308
>AF483622-1|AAL82503.1| 320|Homo sapiens replication factor C
(activator 1) 2 (40kD) protein.
Length = 320
Score = 107 bits (256), Expect = 7e-23
Identities = 57/201 (28%), Positives = 106/201 (52%)
Frame = -2
Query: 732 DAMTNDAQNALRRIIEKYTENVRFCIICNYLGKIIPALQSRCTRFRFAPLKQDQIVPRLQ 553
D+MT+ AQ ALRR +E Y++ RF + CN KII +QSRC R+ L QI+ RL
Sbjct: 110 DSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQSRCAVLRYTKLTDAQILTRLM 169
Query: 552 EIVTTEGVKMSEGGMKALLTLSGGDMRKVLNTLQSTWLAYRDVTEDNVYTCVGHPLRADI 373
++ E V ++ G++A++ + GDMR+ LN LQST+ + + +NV+ P +
Sbjct: 170 NVIEKERVPYTDDGLEAIIFTAQGDMRQALNNLQSTFSGFGFINSENVFKVCDEPHPLLV 229
Query: 372 DSILNWLLNENDFSACFKSIQDLKIAKGLALSDILAEVHTIIQRVKLPPEVLVSLLIKMS 193
++ +N N +K + L G + DI+ + + + ++ + + + ++
Sbjct: 230 KEMIQHCVNAN-IDEAYKILAHL-WHLGYSPEDIIGNIFRVCKTFQMAEYLKLEFIKEIG 287
Query: 192 DAEARLASGSSERVELAALIA 130
++A G + +++A L+A
Sbjct: 288 YTHMKIAEGVNSLLQMAGLLA 308
>AC005081-2|AAP22335.1| 320|Homo sapiens unknown protein.
Length = 320
Score = 107 bits (256), Expect = 7e-23
Identities = 57/201 (28%), Positives = 106/201 (52%)
Frame = -2
Query: 732 DAMTNDAQNALRRIIEKYTENVRFCIICNYLGKIIPALQSRCTRFRFAPLKQDQIVPRLQ 553
D+MT+ AQ ALRR +E Y++ RF + CN KII +QSRC R+ L QI+ RL
Sbjct: 110 DSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQSRCAVLRYTKLTDAQILTRLM 169
Query: 552 EIVTTEGVKMSEGGMKALLTLSGGDMRKVLNTLQSTWLAYRDVTEDNVYTCVGHPLRADI 373
++ E V ++ G++A++ + GDMR+ LN LQST+ + + +NV+ P +
Sbjct: 170 NVIEKERVPYTDDGLEAIIFTAQGDMRQALNNLQSTFSGFGFINSENVFKVCDEPHPLLV 229
Query: 372 DSILNWLLNENDFSACFKSIQDLKIAKGLALSDILAEVHTIIQRVKLPPEVLVSLLIKMS 193
++ +N N +K + L G + DI+ + + + ++ + + + ++
Sbjct: 230 KEMIQHCVNAN-IDEAYKILAHL-WHLGYSPEDIIGNIFRVCKTFQMAEYLKLEFIKEIG 287
Query: 192 DAEARLASGSSERVELAALIA 130
++A G + +++A L+A
Sbjct: 288 YTHMKIAEGVNSLLQMAGLLA 308
>L07541-1|AAB07268.1| 356|Homo sapiens replication factor C, 38-kDa
subunit protein.
Length = 356
Score = 65.3 bits (152), Expect = 3e-10
Identities = 34/98 (34%), Positives = 50/98 (51%)
Frame = -2
Query: 756 KLIILDEADAMTNDAQNALRRIIEKYTENVRFCIICNYLGKIIPALQSRCTRFRFAPLKQ 577
K+++L E D +T DAQ+ALRR +EKY R + CN K+IP ++SRC R
Sbjct: 130 KVVLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSRCLAVRVPAPSI 189
Query: 576 DQIVPRLQEIVTTEGVKMSEGGMKALLTLSGGDMRKVL 463
+ I L + EG+ + L S ++RK L
Sbjct: 190 EDICHVLSTVCKKEGLNLPSQLAHRLAEKSCRNLRKAL 227
>BT019668-1|AAV38474.1| 356|Homo sapiens replication factor C
(activator 1) 3, 38kDa protein.
Length = 356
Score = 65.3 bits (152), Expect = 3e-10
Identities = 34/98 (34%), Positives = 50/98 (51%)
Frame = -2
Query: 756 KLIILDEADAMTNDAQNALRRIIEKYTENVRFCIICNYLGKIIPALQSRCTRFRFAPLKQ 577
K+++L E D +T DAQ+ALRR +EKY R + CN K+IP ++SRC R
Sbjct: 130 KVVLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSRCLAVRVPAPSI 189
Query: 576 DQIVPRLQEIVTTEGVKMSEGGMKALLTLSGGDMRKVL 463
+ I L + EG+ + L S ++RK L
Sbjct: 190 EDICHVLSTVCKKEGLNLPSQLAHRLAEKSCRNLRKAL 227
>BC000149-1|AAH00149.1| 356|Homo sapiens replication factor C
(activator 1) 3, 38kDa protein.
Length = 356
Score = 65.3 bits (152), Expect = 3e-10
Identities = 34/98 (34%), Positives = 50/98 (51%)
Frame = -2
Query: 756 KLIILDEADAMTNDAQNALRRIIEKYTENVRFCIICNYLGKIIPALQSRCTRFRFAPLKQ 577
K+++L E D +T DAQ+ALRR +EKY R + CN K+IP ++SRC R
Sbjct: 130 KVVLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSRCLAVRVPAPSI 189
Query: 576 DQIVPRLQEIVTTEGVKMSEGGMKALLTLSGGDMRKVL 463
+ I L + EG+ + L S ++RK L
Sbjct: 190 EDICHVLSTVCKKEGLNLPSQLAHRLAEKSCRNLRKAL 227
>AL139081-1|CAH70947.1| 356|Homo sapiens replication factor C
(activator 1) 3, 38kDa protein.
Length = 356
Score = 65.3 bits (152), Expect = 3e-10
Identities = 34/98 (34%), Positives = 50/98 (51%)
Frame = -2
Query: 756 KLIILDEADAMTNDAQNALRRIIEKYTENVRFCIICNYLGKIIPALQSRCTRFRFAPLKQ 577
K+++L E D +T DAQ+ALRR +EKY R + CN K+IP ++SRC R
Sbjct: 130 KVVLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSRCLAVRVPAPSI 189
Query: 576 DQIVPRLQEIVTTEGVKMSEGGMKALLTLSGGDMRKVL 463
+ I L + EG+ + L S ++RK L
Sbjct: 190 EDICHVLSTVCKKEGLNLPSQLAHRLAEKSCRNLRKAL 227
>AF484446-1|AAL82505.1| 356|Homo sapiens replication factor C
(activator 1) 3 (38kD) protein.
Length = 356
Score = 65.3 bits (152), Expect = 3e-10
Identities = 34/98 (34%), Positives = 50/98 (51%)
Frame = -2
Query: 756 KLIILDEADAMTNDAQNALRRIIEKYTENVRFCIICNYLGKIIPALQSRCTRFRFAPLKQ 577
K+++L E D +T DAQ+ALRR +EKY R + CN K+IP ++SRC R
Sbjct: 130 KVVLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSRCLAVRVPAPSI 189
Query: 576 DQIVPRLQEIVTTEGVKMSEGGMKALLTLSGGDMRKVL 463
+ I L + EG+ + L S ++RK L
Sbjct: 190 EDICHVLSTVCKKEGLNLPSQLAHRLAEKSCRNLRKAL 227
>AK222572-1|BAD96292.1| 356|Homo sapiens replication factor C 3
isoform 1 variant protein.
Length = 356
Score = 64.5 bits (150), Expect = 5e-10
Identities = 34/98 (34%), Positives = 50/98 (51%)
Frame = -2
Query: 756 KLIILDEADAMTNDAQNALRRIIEKYTENVRFCIICNYLGKIIPALQSRCTRFRFAPLKQ 577
K+++L E D +T DAQ+ALRR +EKY R + CN K+IP ++SRC R
Sbjct: 130 KVVLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSRCLAVRVPAPSI 189
Query: 576 DQIVPRLQEIVTTEGVKMSEGGMKALLTLSGGDMRKVL 463
+ I L + EG+ + L S ++RK L
Sbjct: 190 EGICHVLSTVCKKEGLNLPSQLAHRLAEKSCRNLRKAL 227
>BC006437-1|AAH06437.1| 1016|Homo sapiens CHTF18 protein protein.
Length = 1016
Score = 39.5 bits (88), Expect(2) = 5e-07
Identities = 20/70 (28%), Positives = 34/70 (48%)
Frame = -2
Query: 660 CIICNYLGKIIPALQSRCTRFRFAPLKQDQIVPRLQEIVTTEGVKMSEGGMKALLTLSGG 481
CI + + L+ + F P ++V RLQE+ +G++ G + AL +
Sbjct: 529 CICNDQFAPSLRQLKQQAFLLHFPPTLPSRLVQRLQEVSLRQGMRADPGVLAALCEKTDN 588
Query: 480 DMRKVLNTLQ 451
D+R +NTLQ
Sbjct: 589 DIRACINTLQ 598
Score = 34.7 bits (76), Expect(2) = 5e-07
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = -2
Query: 855 VLELNAXDDRGIGIVRGQILSFASTRTIFKAG--PKLIILDEADAMTNDAQNALRRIIEK 682
V+E+NA DDR + R +I + ++ AG P +++DE D A N L I+ +
Sbjct: 436 VVEMNASDDRSPEVFRTRIEAATQMESVLGAGGKPNCLVIDEIDGAPVAAINVLLSILNR 495
>BC018184-1|AAH18184.1| 975|Homo sapiens CTF18, chromosome
transmission fidelity factor 18 homolog (S. cerevisiae)
protein.
Length = 975
Score = 39.5 bits (88), Expect(2) = 5e-07
Identities = 20/70 (28%), Positives = 34/70 (48%)
Frame = -2
Query: 660 CIICNYLGKIIPALQSRCTRFRFAPLKQDQIVPRLQEIVTTEGVKMSEGGMKALLTLSGG 481
CI + + L+ + F P ++V RLQE+ +G++ G + AL +
Sbjct: 488 CICNDQFAPSLRQLKQQAFLLHFPPTLPSRLVQRLQEVSLRQGMRADPGVLAALCEKTDN 547
Query: 480 DMRKVLNTLQ 451
D+R +NTLQ
Sbjct: 548 DIRACINTLQ 557
Score = 34.7 bits (76), Expect(2) = 5e-07
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = -2
Query: 855 VLELNAXDDRGIGIVRGQILSFASTRTIFKAG--PKLIILDEADAMTNDAQNALRRIIEK 682
V+E+NA DDR + R +I + ++ AG P +++DE D A N L I+ +
Sbjct: 395 VVEMNASDDRSPEVFRTRIEAATQMESVLGAGGKPNCLVIDEIDGAPVAAINVLLSILNR 454
>BC006278-1|AAH06278.2| 975|Homo sapiens CTF18, chromosome
transmission fidelity factor 18 homolog (S. cerevisiae)
protein.
Length = 975
Score = 39.5 bits (88), Expect(2) = 5e-07
Identities = 20/70 (28%), Positives = 34/70 (48%)
Frame = -2
Query: 660 CIICNYLGKIIPALQSRCTRFRFAPLKQDQIVPRLQEIVTTEGVKMSEGGMKALLTLSGG 481
CI + + L+ + F P ++V RLQE+ +G++ G + AL +
Sbjct: 488 CICNDQFAPSLRQLKQQAFLLHFPPTLPSRLVQRLQEVSLRQGMRADPGVLAALCEKTDN 547
Query: 480 DMRKVLNTLQ 451
D+R +NTLQ
Sbjct: 548 DIRACINTLQ 557
Score = 34.7 bits (76), Expect(2) = 5e-07
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = -2
Query: 855 VLELNAXDDRGIGIVRGQILSFASTRTIFKAG--PKLIILDEADAMTNDAQNALRRIIEK 682
V+E+NA DDR + R +I + ++ AG P +++DE D A N L I+ +
Sbjct: 395 VVEMNASDDRSPEVFRTRIEAATQMESVLGAGGKPNCLVIDEIDGAPVAAINVLLSILNR 454
>AE006465-2|AAK61256.1| 1184|Homo sapiens some homology with
holliday junction DNA helicase RUVB like protein.
Length = 1184
Score = 34.7 bits (76), Expect(2) = 1e-04
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = -2
Query: 855 VLELNAXDDRGIGIVRGQILSFASTRTIFKAG--PKLIILDEADAMTNDAQNALRRIIEK 682
V+E+NA DDR + R +I + ++ AG P +++DE D A N L I+ +
Sbjct: 590 VVEMNASDDRSPEVFRTRIEAATQMESVLGAGGKPNCLVIDEIDGAPVAAINVLLSILNR 649
Score = 31.5 bits (68), Expect(2) = 1e-04
Identities = 20/70 (28%), Positives = 32/70 (45%)
Frame = -2
Query: 660 CIICNYLGKIIPALQSRCTRFRFAPLKQDQIVPRLQEIVTTEGVKMSEGGMKALLTLSGG 481
CI + + L+ + F P ++V RLQE G++ G + AL +
Sbjct: 683 CICNDQFAPSLRQLKQQAFLLHFPPTLPSRLVQRLQE-----GMRADPGVLAALCEKTDN 737
Query: 480 DMRKVLNTLQ 451
D+R +NTLQ
Sbjct: 738 DIRACINTLQ 747
>L23320-1|AAA16121.1| 1148|Homo sapiens replication factor C large
subunit protein.
Length = 1148
Score = 41.5 bits (93), Expect = 0.004
Identities = 40/159 (25%), Positives = 71/159 (44%), Gaps = 13/159 (8%)
Frame = -2
Query: 873 QQFSSMVLELNAXDDRG---IGIVRGQILSFASTRTIFKAGPK-------LIILDEADAM 724
Q+ +ELNA D R + + + L+ S + + G +I+DE D M
Sbjct: 666 QELGYSYVELNASDTRSKSSLKAIVAESLNNTSIKGFYSNGAASSVSTKHALIMDEVDGM 725
Query: 723 T-NDAQNALRRIIE--KYTENVRFCIICNYLGKIIPALQSRCTRFRFAPLKQDQIVPRLQ 553
N+ + ++ +I K+T+ C+ + I +L C RF + +QI +
Sbjct: 726 AGNEDRGGIQELIGLIKHTKIPIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQIKGAMM 785
Query: 552 EIVTTEGVKMSEGGMKALLTLSGGDMRKVLNTLQSTWLA 436
I EG+K+ M ++ + D+R+VL+ L S W A
Sbjct: 786 SIAFKEGLKIPPPAMNEIILGANQDIRQVLHNL-SMWCA 823
>BC051786-1|AAH51786.1| 1148|Homo sapiens RFC1 protein protein.
Length = 1148
Score = 41.5 bits (93), Expect = 0.004
Identities = 40/159 (25%), Positives = 71/159 (44%), Gaps = 13/159 (8%)
Frame = -2
Query: 873 QQFSSMVLELNAXDDRG---IGIVRGQILSFASTRTIFKAGPK-------LIILDEADAM 724
Q+ +ELNA D R + + + L+ S + + G +I+DE D M
Sbjct: 666 QELGYSYVELNASDTRSKSSLKAIVAESLNNTSIKGFYSNGAASSVSTKHALIMDEVDGM 725
Query: 723 T-NDAQNALRRIIE--KYTENVRFCIICNYLGKIIPALQSRCTRFRFAPLKQDQIVPRLQ 553
N+ + ++ +I K+T+ C+ + I +L C RF + +QI +
Sbjct: 726 AGNEDRGGIQELIGLIKHTKIPIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQIKGAMM 785
Query: 552 EIVTTEGVKMSEGGMKALLTLSGGDMRKVLNTLQSTWLA 436
I EG+K+ M ++ + D+R+VL+ L S W A
Sbjct: 786 SIAFKEGLKIPPPAMNEIILGANQDIRQVLHNL-SMWCA 823
>BC051751-1|AAH51751.1| 1147|Homo sapiens replication factor C
(activator 1) 1, 145kDa protein.
Length = 1147
Score = 41.5 bits (93), Expect = 0.004
Identities = 40/159 (25%), Positives = 71/159 (44%), Gaps = 13/159 (8%)
Frame = -2
Query: 873 QQFSSMVLELNAXDDRG---IGIVRGQILSFASTRTIFKAGPK-------LIILDEADAM 724
Q+ +ELNA D R + + + L+ S + + G +I+DE D M
Sbjct: 665 QELGYSYVELNASDTRSKSSLKAIVAESLNNTSIKGFYSNGAASSVSTKHALIMDEVDGM 724
Query: 723 T-NDAQNALRRIIE--KYTENVRFCIICNYLGKIIPALQSRCTRFRFAPLKQDQIVPRLQ 553
N+ + ++ +I K+T+ C+ + I +L C RF + +QI +
Sbjct: 725 AGNEDRGGIQELIGLIKHTKIPIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQIKGAMM 784
Query: 552 EIVTTEGVKMSEGGMKALLTLSGGDMRKVLNTLQSTWLA 436
I EG+K+ M ++ + D+R+VL+ L S W A
Sbjct: 785 SIAFKEGLKIPPPAMNEIILGANQDIRQVLHNL-SMWCA 822
>BC035297-1|AAH35297.1| 1148|Homo sapiens replication factor C
(activator 1) 1, 145kDa protein.
Length = 1148
Score = 41.5 bits (93), Expect = 0.004
Identities = 40/159 (25%), Positives = 71/159 (44%), Gaps = 13/159 (8%)
Frame = -2
Query: 873 QQFSSMVLELNAXDDRG---IGIVRGQILSFASTRTIFKAGPK-------LIILDEADAM 724
Q+ +ELNA D R + + + L+ S + + G +I+DE D M
Sbjct: 666 QELGYSYVELNASDTRSKSSLKAIVAESLNNTSIKGFYSNGAASSVSTKHALIMDEVDGM 725
Query: 723 T-NDAQNALRRIIE--KYTENVRFCIICNYLGKIIPALQSRCTRFRFAPLKQDQIVPRLQ 553
N+ + ++ +I K+T+ C+ + I +L C RF + +QI +
Sbjct: 726 AGNEDRGGIQELIGLIKHTKIPIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQIKGAMM 785
Query: 552 EIVTTEGVKMSEGGMKALLTLSGGDMRKVLNTLQSTWLA 436
I EG+K+ M ++ + D+R+VL+ L S W A
Sbjct: 786 SIAFKEGLKIPPPAMNEIILGANQDIRQVLHNL-SMWCA 823
>AY600371-1|AAS94325.1| 1147|Homo sapiens replication factor C
(activator 1) 1, 145kDa protein.
Length = 1147
Score = 41.5 bits (93), Expect = 0.004
Identities = 40/159 (25%), Positives = 71/159 (44%), Gaps = 13/159 (8%)
Frame = -2
Query: 873 QQFSSMVLELNAXDDRG---IGIVRGQILSFASTRTIFKAGPK-------LIILDEADAM 724
Q+ +ELNA D R + + + L+ S + + G +I+DE D M
Sbjct: 665 QELGYSYVELNASDTRSKSSLKAIVAESLNNTSIKGFYSNGAASSVSTKHALIMDEVDGM 724
Query: 723 T-NDAQNALRRIIE--KYTENVRFCIICNYLGKIIPALQSRCTRFRFAPLKQDQIVPRLQ 553
N+ + ++ +I K+T+ C+ + I +L C RF + +QI +
Sbjct: 725 AGNEDRGGIQELIGLIKHTKIPIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQIKGAMM 784
Query: 552 EIVTTEGVKMSEGGMKALLTLSGGDMRKVLNTLQSTWLA 436
I EG+K+ M ++ + D+R+VL+ L S W A
Sbjct: 785 SIAFKEGLKIPPPAMNEIILGANQDIRQVLHNL-SMWCA 822
>AL031033-2|CAB53056.1| 260|Homo sapiens protein ( Human DNA
sequence from clone LA16c-321D2 on chromosome 16
Contains a gene for a Ribosomal Large Subunit
Pseudouridine Synthase (EC ).
Length = 260
Score = 34.7 bits (76), Expect(2) = 0.005
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = -2
Query: 855 VLELNAXDDRGIGIVRGQILSFASTRTIFKAG--PKLIILDEADAMTNDAQNALRRIIEK 682
V+E+NA DDR + R +I + ++ AG P +++DE D A N L I+ +
Sbjct: 117 VVEMNASDDRSPEVFRTRIEAATQMESVLGAGGKPNCLVIDEIDGAPVAAINVLLSILNR 176
Score = 25.8 bits (54), Expect(2) = 0.005
Identities = 12/49 (24%), Positives = 22/49 (44%)
Frame = -2
Query: 660 CIICNYLGKIIPALQSRCTRFRFAPLKQDQIVPRLQEIVTTEGVKMSEG 514
CI + + L+ + F P ++V RLQE+ +G++ G
Sbjct: 210 CICNDQFAPSLRQLKQQAFLLHFPPTLPSRLVQRLQEVSLRQGMRADPG 258
>Z22642-1|CAA80355.1| 1147|Homo sapiens PO-GA protein.
Length = 1147
Score = 40.3 bits (90), Expect = 0.009
Identities = 30/108 (27%), Positives = 53/108 (49%), Gaps = 3/108 (2%)
Frame = -2
Query: 750 IILDEADAMT-NDAQNALRRIIE--KYTENVRFCIICNYLGKIIPALQSRCTRFRFAPLK 580
+I+DE D M N+ + ++ +I K+T+ C+ + I +L C RF +
Sbjct: 716 LIMDEVDGMAGNEDRGGIQELIGLIKHTKIPIICMCNDRNHPKIRSLVHYCFDLRFQRPR 775
Query: 579 QDQIVPRLQEIVTTEGVKMSEGGMKALLTLSGGDMRKVLNTLQSTWLA 436
+QI + I EG+K+ M ++ + D+R+VL+ L S W A
Sbjct: 776 VEQIKGAMMSIAFKEGLKIPPPAMNEIILGANQDIRQVLHNL-SMWCA 822
>AF040250-1|AAB99788.1| 1147|Homo sapiens DNA binding protein protein.
Length = 1147
Score = 40.3 bits (90), Expect = 0.009
Identities = 30/108 (27%), Positives = 53/108 (49%), Gaps = 3/108 (2%)
Frame = -2
Query: 750 IILDEADAMT-NDAQNALRRIIE--KYTENVRFCIICNYLGKIIPALQSRCTRFRFAPLK 580
+I+DE D M N+ + ++ +I K+T+ C+ + I +L C RF +
Sbjct: 716 LIMDEVDGMAGNEDRGGIQELIGLIKHTKIPIICMCNDRNHPKIRSLVHYCFDLRFQRPR 775
Query: 579 QDQIVPRLQEIVTTEGVKMSEGGMKALLTLSGGDMRKVLNTLQSTWLA 436
+QI + I EG+K+ M ++ + D+R+VL+ L S W A
Sbjct: 776 VEQIKGAMMSIAFKEGLKIPPPAMNEIILGANQDIRQVLHNL-SMWCA 822
>AK024476-1|BAB15766.1| 579|Homo sapiens FLJ00069 protein protein.
Length = 579
Score = 39.5 bits (88), Expect = 0.016
Identities = 20/70 (28%), Positives = 34/70 (48%)
Frame = -2
Query: 660 CIICNYLGKIIPALQSRCTRFRFAPLKQDQIVPRLQEIVTTEGVKMSEGGMKALLTLSGG 481
CI + + L+ + F P ++V RLQE+ +G++ G + AL +
Sbjct: 92 CICNDQFAPSLRQLKQQAFLLHFPPTLPSRLVQRLQEVSLRQGMRADPGVLAALCEKTDN 151
Query: 480 DMRKVLNTLQ 451
D+R +NTLQ
Sbjct: 152 DIRACINTLQ 161
>BC043423-1|AAH43423.1| 301|Homo sapiens ABCB6 protein protein.
Length = 301
Score = 34.3 bits (75), Expect = 0.60
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = -2
Query: 831 DRGIGIVRGQILSFASTRTIFKAGPKLIILDEA-DAMTNDAQNALRRIIEKYTENVRFCI 655
+RG+ + G+ A RTI KA P +I+LDEA A+ + A++ + K N +
Sbjct: 181 ERGLKLSGGEKQRVAIARTILKA-PGIILLDEATSALDTSNERAIQASLAKVCANRTTIV 239
Query: 654 ICNYLGKIIPALQ 616
+ + L ++ A Q
Sbjct: 240 VAHRLSTVVNADQ 252
>BC000559-1|AAH00559.1| 842|Homo sapiens ATP-binding cassette,
sub-family B (MDR/TAP), member 6 protein.
Length = 842
Score = 34.3 bits (75), Expect = 0.60
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = -2
Query: 831 DRGIGIVRGQILSFASTRTIFKAGPKLIILDEA-DAMTNDAQNALRRIIEKYTENVRFCI 655
+RG+ + G+ A RTI KA P +I+LDEA A+ + A++ + K N +
Sbjct: 722 ERGLKLSGGEKQRVAIARTILKA-PGIILLDEATSALDTSNERAIQASLAKVCANRTTIV 780
Query: 654 ICNYLGKIIPALQ 616
+ + L ++ A Q
Sbjct: 781 VAHRLSTVVNADQ 793
>AK172812-1|BAD18782.1| 571|Homo sapiens protein ( Homo sapiens
cDNA FLJ23973 fis, clone HEP18305, highly similar to
ATP-binding cassette, sub-family B, member 6,
mitochondrial precursor. ).
Length = 571
Score = 34.3 bits (75), Expect = 0.60
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = -2
Query: 831 DRGIGIVRGQILSFASTRTIFKAGPKLIILDEA-DAMTNDAQNALRRIIEKYTENVRFCI 655
+RG+ + G+ A RTI KA P +I+LDEA A+ + A++ + K N +
Sbjct: 451 ERGLKLSGGEKQRVAIARTILKA-PGIILLDEATSALDTSNERAIQASLAKVCANRTTIV 509
Query: 654 ICNYLGKIIPALQ 616
+ + L ++ A Q
Sbjct: 510 VAHRLSTVVNADQ 522
>AK057026-1|BAB71347.1| 766|Homo sapiens protein ( Homo sapiens
cDNA FLJ32464 fis, clone SKNMC1000251, highly similar to
Homo sapiens MT-ABC transporter (MTABC) mRNA. ).
Length = 766
Score = 34.3 bits (75), Expect = 0.60
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = -2
Query: 831 DRGIGIVRGQILSFASTRTIFKAGPKLIILDEA-DAMTNDAQNALRRIIEKYTENVRFCI 655
+RG+ + G+ A RTI KA P +I+LDEA A+ + A++ + K N +
Sbjct: 646 ERGLKLSGGEKQRVAIARTILKA-PGIILLDEATSALDTSNERAIQASLAKVCANRTTIV 704
Query: 654 ICNYLGKIIPALQ 616
+ + L ++ A Q
Sbjct: 705 VAHRLSTVVNADQ 717
>AJ289233-1|CAB95766.2| 842|Homo sapiens ABC transporter umat
protein.
Length = 842
Score = 34.3 bits (75), Expect = 0.60
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = -2
Query: 831 DRGIGIVRGQILSFASTRTIFKAGPKLIILDEA-DAMTNDAQNALRRIIEKYTENVRFCI 655
+RG+ + G+ A RTI KA P +I+LDEA A+ + A++ + K N +
Sbjct: 722 ERGLKLSGGEKQRVAIARTILKA-PGIILLDEATSALDTSNERAIQASLAKVCANRTTIV 780
Query: 654 ICNYLGKIIPALQ 616
+ + L ++ A Q
Sbjct: 781 VAHRLSTVVNADQ 793
>AF308472-1|AAG33617.1| 896|Homo sapiens ATP-binding cassette
half-transporter protein.
Length = 896
Score = 34.3 bits (75), Expect = 0.60
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = -2
Query: 831 DRGIGIVRGQILSFASTRTIFKAGPKLIILDEA-DAMTNDAQNALRRIIEKYTENVRFCI 655
+RG+ + G+ A RTI KA P +I+LDEA A+ + A++ + K N +
Sbjct: 776 ERGLKLSGGEKQRVAIARTILKA-PGIILLDEATSALDTSNERAIQASLAKVCANRTTIV 834
Query: 654 ICNYLGKIIPALQ 616
+ + L ++ A Q
Sbjct: 835 VAHRLSTVVNADQ 847
>AF076775-1|AAF75107.1| 842|Homo sapiens MT-ABC transporter
protein.
Length = 842
Score = 34.3 bits (75), Expect = 0.60
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = -2
Query: 831 DRGIGIVRGQILSFASTRTIFKAGPKLIILDEA-DAMTNDAQNALRRIIEKYTENVRFCI 655
+RG+ + G+ A RTI KA P +I+LDEA A+ + A++ + K N +
Sbjct: 722 ERGLKLSGGEKQRVAIARTILKA-PGIILLDEATSALDTSNERAIQASLAKVCANRTTIV 780
Query: 654 ICNYLGKIIPALQ 616
+ + L ++ A Q
Sbjct: 781 VAHRLSTVVNADQ 793
>AF070598-1|AAC28653.1| 511|Homo sapiens ABC transporter protein.
Length = 511
Score = 34.3 bits (75), Expect = 0.60
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = -2
Query: 831 DRGIGIVRGQILSFASTRTIFKAGPKLIILDEA-DAMTNDAQNALRRIIEKYTENVRFCI 655
+RG+ + G+ A RTI KA P +I+LDEA A+ + A++ + K N +
Sbjct: 391 ERGLKLSGGEKQRVAIARTILKA-PGIILLDEATSALDTSNERAIQASLAKVCANRTTIV 449
Query: 654 ICNYLGKIIPALQ 616
+ + L ++ A Q
Sbjct: 450 VAHRLSTVVNADQ 462
>AB039371-1|BAA96733.1| 842|Homo sapiens mitochondrial ABC
transporter 3 protein.
Length = 842
Score = 34.3 bits (75), Expect = 0.60
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = -2
Query: 831 DRGIGIVRGQILSFASTRTIFKAGPKLIILDEA-DAMTNDAQNALRRIIEKYTENVRFCI 655
+RG+ + G+ A RTI KA P +I+LDEA A+ + A++ + K N +
Sbjct: 722 ERGLKLSGGEKQRVAIARTILKA-PGIILLDEATSALDTSNERAIQASLAKVCANRTTIV 780
Query: 654 ICNYLGKIIPALQ 616
+ + L ++ A Q
Sbjct: 781 VAHRLSTVVNADQ 793
>M22299-1|AAB02844.1| 570|Homo sapiens T-plastin polypeptide
protein.
Length = 570
Score = 31.1 bits (67), Expect = 5.6
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Frame = -2
Query: 459 TLQSTWLAYRDVTEDNVYTCVGHPLRADIDSILNWL---LNENDFSACFKSIQDLKIAKG 289
TL W R T NV +G +A+ D I+NW+ L+E S +S +D I+
Sbjct: 434 TLALVWQLMRRYTL-NVLEDLGDGQKANDDIIVNWVNRTLSEAGKSTSIQSFKDKTISSS 492
Query: 288 LALSDIL 268
LA+ D++
Sbjct: 493 LAVVDLI 499
>BC150494-1|AAI50495.1| 150|Homo sapiens Unknown (protein for
IMAGE:40134238) protein.
Length = 150
Score = 31.1 bits (67), Expect = 5.6
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Frame = -2
Query: 459 TLQSTWLAYRDVTEDNVYTCVGHPLRADIDSILNWL---LNENDFSACFKSIQDLKIAKG 289
TL W R T NV +G +A+ D I+NW+ L+E S +S +D I+
Sbjct: 14 TLALVWQLMRRYTL-NVLEDLGDGQKANDDIIVNWVNRTLSEAGKSTSIQSFKDKTISSS 72
Query: 288 LALSDIL 268
LA+ D++
Sbjct: 73 LAVVDLI 79
>BC056898-1|AAH56898.1| 630|Homo sapiens plastin 3 (T isoform)
protein.
Length = 630
Score = 31.1 bits (67), Expect = 5.6
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Frame = -2
Query: 459 TLQSTWLAYRDVTEDNVYTCVGHPLRADIDSILNWL---LNENDFSACFKSIQDLKIAKG 289
TL W R T NV +G +A+ D I+NW+ L+E S +S +D I+
Sbjct: 494 TLALVWQLMRRYTL-NVLEDLGDGQKANDDIIVNWVNRTLSEAGKSTSIQSFKDKTISSS 552
Query: 288 LALSDIL 268
LA+ D++
Sbjct: 553 LAVVDLI 559
>BC039049-1|AAH39049.1| 630|Homo sapiens plastin 3 (T isoform)
protein.
Length = 630
Score = 31.1 bits (67), Expect = 5.6
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Frame = -2
Query: 459 TLQSTWLAYRDVTEDNVYTCVGHPLRADIDSILNWL---LNENDFSACFKSIQDLKIAKG 289
TL W R T NV +G +A+ D I+NW+ L+E S +S +D I+
Sbjct: 494 TLALVWQLMRRYTL-NVLEDLGDGQKANDDIIVNWVNRTLSEAGKSTSIQSFKDKTISSS 552
Query: 288 LALSDIL 268
LA+ D++
Sbjct: 553 LAVVDLI 559
>BC008588-1|AAH08588.1| 409|Homo sapiens Similar to plastin 3 (T
isoform) protein.
Length = 409
Score = 31.1 bits (67), Expect = 5.6
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Frame = -2
Query: 459 TLQSTWLAYRDVTEDNVYTCVGHPLRADIDSILNWL---LNENDFSACFKSIQDLKIAKG 289
TL W R T NV +G +A+ D I+NW+ L+E S +S +D I+
Sbjct: 273 TLALVWQLMRRYTL-NVLEDLGDGQKANDDIIVNWVNRTLSEAGKSTSIQSFKDKTISSS 331
Query: 288 LALSDIL 268
LA+ D++
Sbjct: 332 LAVVDLI 338
>AL589842-1|CAI39884.1| 627|Homo sapiens plastin 3 (T isoform)
protein.
Length = 627
Score = 31.1 bits (67), Expect = 5.6
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Frame = -2
Query: 459 TLQSTWLAYRDVTEDNVYTCVGHPLRADIDSILNWL---LNENDFSACFKSIQDLKIAKG 289
TL W R T NV +G +A+ D I+NW+ L+E S +S +D I+
Sbjct: 491 TLALVWQLMRRYTL-NVLEDLGDGQKANDDIIVNWVNRTLSEAGKSTSIQSFKDKTISSS 549
Query: 288 LALSDIL 268
LA+ D++
Sbjct: 550 LAVVDLI 556
>AK222801-1|BAD96521.1| 630|Homo sapiens plastin 3 variant protein.
Length = 630
Score = 31.1 bits (67), Expect = 5.6
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Frame = -2
Query: 459 TLQSTWLAYRDVTEDNVYTCVGHPLRADIDSILNWL---LNENDFSACFKSIQDLKIAKG 289
TL W R T NV +G +A+ D I+NW+ L+E S +S +D I+
Sbjct: 494 TLALVWQLMRRYTL-NVLEDLGDGQKANDDIIVNWVNRTLSEAGKSTSIQSFKDKTISSS 552
Query: 288 LALSDIL 268
LA+ D++
Sbjct: 553 LAVVDLI 559
>BC060759-1|AAH60759.1| 1359|Homo sapiens MED23 protein protein.
Length = 1359
Score = 30.7 bits (66), Expect = 7.3
Identities = 20/87 (22%), Positives = 40/87 (45%)
Frame = -2
Query: 435 YRDVTEDNVYTCVGHPLRADIDSILNWLLNENDFSACFKSIQDLKIAKGLALSDILAEVH 256
Y V D + + + P + + DF+AC +S ++ + LAL+ + H
Sbjct: 1160 YWIVLHDRIVSVISSPSLTSETEWVGYPFRLFDFTACHQSYSEMSCSYTLALAHAVWH-H 1218
Query: 255 TIIQRVKLPPEVLVSLLIKMSDAEARL 175
+ I ++ L P+ L +L+ + E +L
Sbjct: 1219 SSIGQLSLIPKFLTEVLLPIVKTEFQL 1245
>AL121575-7|CAB92072.1| 1368|Homo sapiens cofactor required for Sp1
transcriptional activation, subunit 3, 130kDa protein.
Length = 1368
Score = 30.7 bits (66), Expect = 7.3
Identities = 20/87 (22%), Positives = 40/87 (45%)
Frame = -2
Query: 435 YRDVTEDNVYTCVGHPLRADIDSILNWLLNENDFSACFKSIQDLKIAKGLALSDILAEVH 256
Y V D + + + P + + DF+AC +S ++ + LAL+ + H
Sbjct: 1160 YWIVLHDRIVSVISSPSLTSETEWVGYPFRLFDFTACHQSYSEMSCSYTLALAHAVWH-H 1218
Query: 255 TIIQRVKLPPEVLVSLLIKMSDAEARL 175
+ I ++ L P+ L +L+ + E +L
Sbjct: 1219 SSIGQLSLIPKFLTEVLLPIVKTEFQL 1245
>AL121575-6|CAI23321.1| 1374|Homo sapiens cofactor required for Sp1
transcriptional activation, subunit 3, 130kDa protein.
Length = 1374
Score = 30.7 bits (66), Expect = 7.3
Identities = 20/87 (22%), Positives = 40/87 (45%)
Frame = -2
Query: 435 YRDVTEDNVYTCVGHPLRADIDSILNWLLNENDFSACFKSIQDLKIAKGLALSDILAEVH 256
Y V D + + + P + + DF+AC +S ++ + LAL+ + H
Sbjct: 1166 YWIVLHDRIVSVISSPSLTSETEWVGYPFRLFDFTACHQSYSEMSCSYTLALAHAVWH-H 1224
Query: 255 TIIQRVKLPPEVLVSLLIKMSDAEARL 175
+ I ++ L P+ L +L+ + E +L
Sbjct: 1225 SSIGQLSLIPKFLTEVLLPIVKTEFQL 1251
>AL121575-5|CAI23320.1| 1364|Homo sapiens cofactor required for Sp1
transcriptional activation, subunit 3, 130kDa protein.
Length = 1364
Score = 30.7 bits (66), Expect = 7.3
Identities = 20/87 (22%), Positives = 40/87 (45%)
Frame = -2
Query: 435 YRDVTEDNVYTCVGHPLRADIDSILNWLLNENDFSACFKSIQDLKIAKGLALSDILAEVH 256
Y V D + + + P + + DF+AC +S ++ + LAL+ + H
Sbjct: 1160 YWIVLHDRIVSVISSPSLTSETEWVGYPFRLFDFTACHQSYSEMSCSYTLALAHAVWH-H 1218
Query: 255 TIIQRVKLPPEVLVSLLIKMSDAEARL 175
+ I ++ L P+ L +L+ + E +L
Sbjct: 1219 SSIGQLSLIPKFLTEVLLPIVKTEFQL 1245
>AL121575-4|CAI23319.1| 1365|Homo sapiens cofactor required for Sp1
transcriptional activation, subunit 3, 130kDa protein.
Length = 1365
Score = 30.7 bits (66), Expect = 7.3
Identities = 20/87 (22%), Positives = 40/87 (45%)
Frame = -2
Query: 435 YRDVTEDNVYTCVGHPLRADIDSILNWLLNENDFSACFKSIQDLKIAKGLALSDILAEVH 256
Y V D + + + P + + DF+AC +S ++ + LAL+ + H
Sbjct: 1166 YWIVLHDRIVSVISSPSLTSETEWVGYPFRLFDFTACHQSYSEMSCSYTLALAHAVWH-H 1224
Query: 255 TIIQRVKLPPEVLVSLLIKMSDAEARL 175
+ I ++ L P+ L +L+ + E +L
Sbjct: 1225 SSIGQLSLIPKFLTEVLLPIVKTEFQL 1251
>AF135022-1|AAD30202.1| 1364|Homo sapiens mediator protein.
Length = 1364
Score = 30.7 bits (66), Expect = 7.3
Identities = 20/87 (22%), Positives = 40/87 (45%)
Frame = -2
Query: 435 YRDVTEDNVYTCVGHPLRADIDSILNWLLNENDFSACFKSIQDLKIAKGLALSDILAEVH 256
Y V D + + + P + + DF+AC +S ++ + LAL+ + H
Sbjct: 1160 YWIVLHDRIVSVISSPSLTSETEWVGYPFRLFDFTACHQSYSEMSCSYTLALAHAVWH-H 1218
Query: 255 TIIQRVKLPPEVLVSLLIKMSDAEARL 175
+ I ++ L P+ L +L+ + E +L
Sbjct: 1219 SSIGQLSLIPKFLTEVLLPIVKTEFQL 1245
>AF105332-1|AAD31729.1| 1368|Homo sapiens vitamin D3 receptor
interacting protein protein.
Length = 1368
Score = 30.7 bits (66), Expect = 7.3
Identities = 20/87 (22%), Positives = 40/87 (45%)
Frame = -2
Query: 435 YRDVTEDNVYTCVGHPLRADIDSILNWLLNENDFSACFKSIQDLKIAKGLALSDILAEVH 256
Y V D + + + P + + DF+AC +S ++ + LAL+ + H
Sbjct: 1160 YWIVLHDRIVSVISSPSLTSETEWVGYPFRLFDFTACHQSYSEMSCSYTLALAHAVWH-H 1218
Query: 255 TIIQRVKLPPEVLVSLLIKMSDAEARL 175
+ I ++ L P+ L +L+ + E +L
Sbjct: 1219 SSIGQLSLIPKFLTEVLLPIVKTEFQL 1245
>AB033042-1|BAA86530.1| 1421|Homo sapiens KIAA1216 protein protein.
Length = 1421
Score = 30.7 bits (66), Expect = 7.3
Identities = 20/87 (22%), Positives = 40/87 (45%)
Frame = -2
Query: 435 YRDVTEDNVYTCVGHPLRADIDSILNWLLNENDFSACFKSIQDLKIAKGLALSDILAEVH 256
Y V D + + + P + + DF+AC +S ++ + LAL+ + H
Sbjct: 1213 YWIVLHDRIVSVISSPSLTSETEWVGYPFRLFDFTACHQSYSEMSCSYTLALAHAVWH-H 1271
Query: 255 TIIQRVKLPPEVLVSLLIKMSDAEARL 175
+ I ++ L P+ L +L+ + E +L
Sbjct: 1272 SSIGQLSLIPKFLTEVLLPIVKTEFQL 1298
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,897,319
Number of Sequences: 237096
Number of extensions: 2200851
Number of successful extensions: 4343
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 3875
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4328
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11326166088
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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