Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_pT_F01
(886 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L23648-10|AAK95878.2| 368|Caenorhabditis elegans Hypothetical p... 261 5e-70
AF036699-3|AAB88360.1| 334|Caenorhabditis elegans Rfc (dna repl... 154 7e-38
U40935-3|AAA81689.1| 334|Caenorhabditis elegans Rfc (dna replic... 127 9e-30
Z70307-13|CAA94339.1| 354|Caenorhabditis elegans Hypothetical p... 69 3e-12
Z68879-1|CAA93081.1| 850|Caenorhabditis elegans Hypothetical pr... 44 1e-04
Z75532-2|CAA99812.1| 839|Caenorhabditis elegans Hypothetical pr... 41 0.001
Z82078-7|CAB04947.3| 801|Caenorhabditis elegans Hypothetical pr... 34 0.12
Z70268-5|CAJ85767.2| 1204|Caenorhabditis elegans Hypothetical pr... 34 0.12
Z70268-4|CAA94220.3| 1263|Caenorhabditis elegans Hypothetical pr... 34 0.12
Z70268-3|CAA94219.3| 1263|Caenorhabditis elegans Hypothetical pr... 34 0.12
AF497514-1|AAM33381.1| 801|Caenorhabditis elegans heavy metal t... 34 0.12
AF497513-1|AAM33380.1| 801|Caenorhabditis elegans heavy metal t... 34 0.12
AF490977-1|AAQ06435.1| 801|Caenorhabditis elegans ABC6 protein ... 34 0.12
Z70265-1|CAA94202.1| 1283|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z70680-8|CAA94570.2| 349|Caenorhabditis elegans Hypothetical pr... 29 4.4
AL132865-14|CAB60610.1| 363|Caenorhabditis elegans Hypothetical... 29 4.4
Z79694-8|CAB01965.1| 872|Caenorhabditis elegans Hypothetical pr... 29 5.8
Z72506-9|CAA96622.1| 872|Caenorhabditis elegans Hypothetical pr... 29 5.8
X08068-1|CAA30857.1| 882|Caenorhabditis elegans paramyosin prot... 29 5.8
>L23648-10|AAK95878.2| 368|Caenorhabditis elegans Hypothetical
protein F44B9.8 protein.
Length = 368
Score = 261 bits (639), Expect = 5e-70
Identities = 130/263 (49%), Positives = 178/263 (67%), Gaps = 9/263 (3%)
Frame = -2
Query: 885 MYTPQQFSSMVLELNAXDDRGIGIVRGQILSFASTR------TIFKAGP---KLIILDEA 733
MY+P + +SMVLELNA D+RGI +VR I++FA T+ T G KL+ILDEA
Sbjct: 86 MYSPTKMASMVLELNASDERGIDVVRNTIVNFAQTKGLQAFSTSSNTGTVPFKLVILDEA 145
Query: 732 DAMTNDAQNALRRIIEKYTENVRFCIICNYLGKIIPALQSRCTRFRFAPLKQDQIVPRLQ 553
DAMT DAQNALRR+IEKYT+NVRFCIICNYL I+PA+QSRCTRFRFAPL Q IVPRL+
Sbjct: 146 DAMTKDAQNALRRVIEKYTDNVRFCIICNYLASIVPAIQSRCTRFRFAPLDQKLIVPRLE 205
Query: 552 EIVTTEGVKMSEGGMKALLTLSGGDMRKVLNTLQSTWLAYRDVTEDNVYTCVGHPLRADI 373
IV TE +KM+ G ALL +S GDMR V+NTLQST +++ V+E+ VY C+G P ++
Sbjct: 206 YIVETEQLKMTPDGKDALLIVSKGDMRTVINTLQSTAMSFDTVSENTVYQCIGQPTPKEM 265
Query: 372 DSILNWLLNENDFSACFKSIQDLKIAKGLALSDILAEVHTIIQRVKLPPEVLVSLLIKMS 193
++ LLN+ C +IQ G AL D++ +H + + +P E + +++ +
Sbjct: 266 KEVVKTLLNDPS-KKCMNTIQTKLFENGYALQDVITHLHDFVFTLDIPDEAMSAIITGLG 324
Query: 192 DAEARLASGSSERVELAALIASF 124
+ E L++G S +LAA++A+F
Sbjct: 325 EVEENLSTGCSNETQLAAVVAAF 347
>AF036699-3|AAB88360.1| 334|Caenorhabditis elegans Rfc (dna
replication factor) familyprotein 2 protein.
Length = 334
Score = 154 bits (374), Expect = 7e-38
Identities = 91/247 (36%), Positives = 142/247 (57%), Gaps = 5/247 (2%)
Frame = -2
Query: 855 VLELNAXDDRGIGIVRGQILSFASTRTIFKAGP-KLIILDEADAMTNDAQNALRRIIEKY 679
VLELNA D+RGI +VR +I +FA T+ G K+IILDEAD+MT+ AQ ALRR +E Y
Sbjct: 76 VLELNASDERGIDVVRHRIKTFAQTKVTLPEGRHKIIILDEADSMTDGAQQALRRTMEMY 135
Query: 678 TENVRFCIICNYLGKIIPALQSRCTRFRFAPLKQDQIVPRLQEIVTTEGVKMSEGGMKAL 499
T+ RF + CN KII +QSRC R+ L Q++ R++E+ E V +GG++A+
Sbjct: 136 TKTTRFALACNQSEKIIEPIQSRCALLRYTKLSPVQLLTRVKEVAKAEKVNYDDGGLEAI 195
Query: 498 LTLSGGDMRKVLNTLQSTWLAYRDVTEDNVYTCVGHPLRADIDSILNWLLNENDFSACFK 319
L + GDMR+ LN LQ+T AY V ++NV P + +L++ + F A K
Sbjct: 196 LFTAQGDMRQALNNLQATVNAYELVNKENVLKVCDEPHPDLMIKMLHYCTDRKFFEAS-K 254
Query: 318 SIQDLKIAKGLALSDILAEVHTIIQRVKLPPEVLVSL----LIKMSDAEARLASGSSERV 151
I + G + DI++ + +++ V+L V L + +++ R+ G + ++
Sbjct: 255 IIHEFH-RLGFSSDDIVSTLFRVVKTVELSKNVSEQLRMEYIRQIAMCHMRIVQGLTSKL 313
Query: 150 ELAALIA 130
+L+ LIA
Sbjct: 314 QLSRLIA 320
>U40935-3|AAA81689.1| 334|Caenorhabditis elegans Rfc (dna
replication factor) familyprotein 4 protein.
Length = 334
Score = 127 bits (307), Expect = 9e-30
Identities = 73/176 (41%), Positives = 105/176 (59%), Gaps = 7/176 (3%)
Frame = -2
Query: 867 FSSMVLELNAXDDRGIGIVRGQILSFAST-------RTIFKAGPKLIILDEADAMTNDAQ 709
F VL+LNA D+RGI +VR +I SF+ + + K K+IILDE DAMT +AQ
Sbjct: 78 FHDRVLDLNASDERGIAVVRQKIQSFSKSSLGHSHREDVLKL--KIIILDEVDAMTREAQ 135
Query: 708 NALRRIIEKYTENVRFCIICNYLGKIIPALQSRCTRFRFAPLKQDQIVPRLQEIVTTEGV 529
A+RR+IE +++ RF +ICNY+ ++IP + SRC +FRF L + V RL+ I EG
Sbjct: 136 AAMRRVIEDFSKTTRFILICNYVSRLIPPVVSRCAKFRFKSLPAEIQVQRLRTICDAEGT 195
Query: 528 KMSEGGMKALLTLSGGDMRKVLNTLQSTWLAYRDVTEDNVYTCVGHPLRADIDSIL 361
MS+ +K ++ S GD+R+ + TLQS + +DN C LR DS+L
Sbjct: 196 PMSDDELKQVMEYSEGDLRRAVCTLQSLAPILKS-GDDNARNCY---LRGSSDSLL 247
>Z70307-13|CAA94339.1| 354|Caenorhabditis elegans Hypothetical
protein C39E9.13 protein.
Length = 354
Score = 69.3 bits (162), Expect = 3e-12
Identities = 31/98 (31%), Positives = 56/98 (57%)
Frame = -2
Query: 756 KLIILDEADAMTNDAQNALRRIIEKYTENVRFCIICNYLGKIIPALQSRCTRFRFAPLKQ 577
K+++L EAD++T DAQ+ LRR +EKY N + + C L +II LQSRC
Sbjct: 132 KVVVLCEADSLTRDAQHGLRRTMEKYANNCKIVLSCESLSRIIEPLQSRCIIINVPAPTD 191
Query: 576 DQIVPRLQEIVTTEGVKMSEGGMKALLTLSGGDMRKVL 463
+ + L++++ E + E ++ ++ S G++R+ +
Sbjct: 192 EDVTKVLRKVIERESFLLPENVLQKIVEKSEGNLRRAI 229
>Z68879-1|CAA93081.1| 850|Caenorhabditis elegans Hypothetical
protein K08F4.1 protein.
Length = 850
Score = 44.4 bits (100), Expect = 1e-04
Identities = 46/154 (29%), Positives = 68/154 (44%), Gaps = 8/154 (5%)
Frame = -2
Query: 873 QQFSSMVLELNAXDDRGIGIVRGQILSFASTRTIFKAG--PKLIILDEADAMTNDAQNAL 700
+Q +++NA D R + + + T A P +ILDE D D L
Sbjct: 352 RQAGYSTIDVNASDARTVADLNKVLEGAVKTSRTLDADQRPACLILDEIDGTPIDTIRHL 411
Query: 699 RRIIEKYTEN-VRFCII--CNYLGKIIPALQS-RCTRF--RFAPLKQDQIVPRLQEIVTT 538
R I+ + +R II CN L PAL+ R + + KQD + RL+EI
Sbjct: 412 VRCIQATGKKAIRRPIIGICNNL--YTPALRDLRGVAWCVQLVATKQDVLAKRLEEICDR 469
Query: 537 EGVKMSEGGMKALLTLSGGDMRKVLNTLQSTWLA 436
E ++ ++ L L DMR +NTLQ W+A
Sbjct: 470 ERLRCDLSTLRKLCELCANDMRHSINTLQ--WVA 501
>Z75532-2|CAA99812.1| 839|Caenorhabditis elegans Hypothetical
protein C54G10.2 protein.
Length = 839
Score = 41.1 bits (92), Expect = 0.001
Identities = 28/104 (26%), Positives = 53/104 (50%), Gaps = 3/104 (2%)
Frame = -2
Query: 753 LIILDEADAMT-NDAQNALRRIIEKYTEN-VRFCIICN-YLGKIIPALQSRCTRFRFAPL 583
++I+DE D M+ N+ + + +I+ E+ + ICN I L + C RF
Sbjct: 415 ILIMDEVDGMSGNEDRAGISELIQIIKESKIPIICICNDRQHPKIRTLANYCYDLRFPKP 474
Query: 582 KQDQIVPRLQEIVTTEGVKMSEGGMKALLTLSGGDMRKVLNTLQ 451
+ + I R+ I + E +K+ + + ++ LSG D+R+ + LQ
Sbjct: 475 RVETIRSRMMTICSQEKMKIGKEELDEIIELSGHDVRQTIYNLQ 518
>Z82078-7|CAB04947.3| 801|Caenorhabditis elegans Hypothetical
protein W09D6.6 protein.
Length = 801
Score = 34.3 bits (75), Expect = 0.12
Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = -2
Query: 831 DRGIGIVRGQILSFASTRTIFKAGPKLIILDEA-DAMTNDAQNALRRIIEKYTENVRFCI 655
+RG+ + G+ A RTI K P+ I LDEA A+ + A+++ +EK ++ +
Sbjct: 682 ERGLKLSGGEKQRVAIARTILKK-PQFIFLDEATSALDTPTERAIQKCLEKLCKSRTGVV 740
Query: 654 ICNYLGKIIPA 622
+ + L ++ A
Sbjct: 741 VAHRLSTVVNA 751
>Z70268-5|CAJ85767.2| 1204|Caenorhabditis elegans Hypothetical
protein T21E8.1b protein.
Length = 1204
Score = 34.3 bits (75), Expect = 0.12
Identities = 18/68 (26%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Frame = -2
Query: 831 DRGIGIVRGQILSFASTRTIFKAGPKLIILDEA-DAMTNDAQNALRRIIEKYTENVRFCI 655
+RG + GQ A RT+ + PK+++LDEA A+ N+++ +++ +E ++ +
Sbjct: 456 ERGTQLSGGQKQRIAIARTLVR-NPKILLLDEATSALDNESEQVVQKALENASQGRTTIV 514
Query: 654 ICNYLGKI 631
+ + L I
Sbjct: 515 VAHRLSTI 522
>Z70268-4|CAA94220.3| 1263|Caenorhabditis elegans Hypothetical
protein T21E8.1a protein.
Length = 1263
Score = 34.3 bits (75), Expect = 0.12
Identities = 18/68 (26%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Frame = -2
Query: 831 DRGIGIVRGQILSFASTRTIFKAGPKLIILDEA-DAMTNDAQNALRRIIEKYTENVRFCI 655
+RG + GQ A RT+ + PK+++LDEA A+ N+++ +++ +E ++ +
Sbjct: 515 ERGTQLSGGQKQRIAIARTLVR-NPKILLLDEATSALDNESEQVVQKALENASQGRTTIV 573
Query: 654 ICNYLGKI 631
+ + L I
Sbjct: 574 VAHRLSTI 581
>Z70268-3|CAA94219.3| 1263|Caenorhabditis elegans Hypothetical
protein T21E8.2 protein.
Length = 1263
Score = 34.3 bits (75), Expect = 0.12
Identities = 18/68 (26%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Frame = -2
Query: 831 DRGIGIVRGQILSFASTRTIFKAGPKLIILDEA-DAMTNDAQNALRRIIEKYTENVRFCI 655
+RG + GQ A RT+ + PK+++LDEA A+ N+++ +++ +E ++ +
Sbjct: 515 ERGTQLSGGQKQRIAIARTLVR-NPKILLLDEATSALDNESEQVVQKALENASQGRTTIV 573
Query: 654 ICNYLGKI 631
+ + L I
Sbjct: 574 VAHRLSTI 581
>AF497514-1|AAM33381.1| 801|Caenorhabditis elegans heavy metal
tolerance factor 1 protein.
Length = 801
Score = 34.3 bits (75), Expect = 0.12
Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = -2
Query: 831 DRGIGIVRGQILSFASTRTIFKAGPKLIILDEA-DAMTNDAQNALRRIIEKYTENVRFCI 655
+RG+ + G+ A RTI K P+ I LDEA A+ + A+++ +EK ++ +
Sbjct: 682 ERGLKLSGGEKQRVAIARTILKK-PQFIFLDEATSALDTPTERAIQKCLEKLCKSRTGVV 740
Query: 654 ICNYLGKIIPA 622
+ + L ++ A
Sbjct: 741 VAHRLSTVVNA 751
>AF497513-1|AAM33380.1| 801|Caenorhabditis elegans heavy metal
tolerance factor 1 protein.
Length = 801
Score = 34.3 bits (75), Expect = 0.12
Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = -2
Query: 831 DRGIGIVRGQILSFASTRTIFKAGPKLIILDEA-DAMTNDAQNALRRIIEKYTENVRFCI 655
+RG+ + G+ A RTI K P+ I LDEA A+ + A+++ +EK ++ +
Sbjct: 682 ERGLKLSGGEKQRVAIARTILKK-PQFIFLDEATSALDTPTERAIQKCLEKLCKSRTGVV 740
Query: 654 ICNYLGKIIPA 622
+ + L ++ A
Sbjct: 741 VAHRLSTVVNA 751
>AF490977-1|AAQ06435.1| 801|Caenorhabditis elegans ABC6 protein
protein.
Length = 801
Score = 34.3 bits (75), Expect = 0.12
Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = -2
Query: 831 DRGIGIVRGQILSFASTRTIFKAGPKLIILDEA-DAMTNDAQNALRRIIEKYTENVRFCI 655
+RG+ + G+ A RTI K P+ I LDEA A+ + A+++ +EK ++ +
Sbjct: 682 ERGLKLSGGEKQRVAIARTILKK-PQFIFLDEATSALDTPTERAIQKCLEKLCKSRTGVV 740
Query: 654 ICNYLGKIIPA 622
+ + L ++ A
Sbjct: 741 VAHRLSTVVNA 751
>Z70265-1|CAA94202.1| 1283|Caenorhabditis elegans Hypothetical
protein C05A9.1 protein.
Length = 1283
Score = 29.5 bits (63), Expect = 3.3
Identities = 17/68 (25%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Frame = -2
Query: 831 DRGIGIVRGQILSFASTRTIFKAGPKLIILDEA-DAMTNDAQNALRRIIEKYTENVRFCI 655
+RG + GQ A RT+ + P++++LDEA A+ N+++ ++ ++K + +
Sbjct: 539 ERGAQLSGGQKQRIAIARTLVR-NPRILLLDEATSALDNESEFIVQEALQKASIGRTTIV 597
Query: 654 ICNYLGKI 631
+ + L I
Sbjct: 598 VAHRLSTI 605
>Z70680-8|CAA94570.2| 349|Caenorhabditis elegans Hypothetical
protein C25G4.7 protein.
Length = 349
Score = 29.1 bits (62), Expect = 4.4
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = -2
Query: 681 YTENVRFCIICNYLGKIIPALQSRCTRFRFAPLKQD 574
Y E + F NYLG+++ A + F FA L +D
Sbjct: 281 YVEKLLFMAHTNYLGRLLEACNATIISFHFADLCRD 316
>AL132865-14|CAB60610.1| 363|Caenorhabditis elegans Hypothetical
protein Y62E10A.17 protein.
Length = 363
Score = 29.1 bits (62), Expect = 4.4
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = -2
Query: 399 VGHPLRADIDSILNWLLNENDFSACFKSIQDL 304
V H AD D+ L+ L+N+ DF+ C +++ +
Sbjct: 257 VAHEALADEDADLDALMNDKDFTECMSALESV 288
>Z79694-8|CAB01965.1| 872|Caenorhabditis elegans Hypothetical
protein F07A5.7 protein.
Length = 872
Score = 28.7 bits (61), Expect = 5.8
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Frame = -2
Query: 279 SDILAEVHTIIQRVKLP--PEVLVSLLIKMSDAEARLASGSSERVELAALIASFQIARDQ 106
+D+L EVH Q+V+L V +L ++ +A RL ER +L + + Q+ D
Sbjct: 212 NDLLKEVHD--QKVQLDNLQHVKYTLAQQLEEARRRLEDAERERSQLQSQLHQVQLELDS 269
Query: 105 VK--LDTE 88
V+ LD E
Sbjct: 270 VRTALDEE 277
>Z72506-9|CAA96622.1| 872|Caenorhabditis elegans Hypothetical
protein F07A5.7 protein.
Length = 872
Score = 28.7 bits (61), Expect = 5.8
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Frame = -2
Query: 279 SDILAEVHTIIQRVKLP--PEVLVSLLIKMSDAEARLASGSSERVELAALIASFQIARDQ 106
+D+L EVH Q+V+L V +L ++ +A RL ER +L + + Q+ D
Sbjct: 212 NDLLKEVHD--QKVQLDNLQHVKYTLAQQLEEARRRLEDAERERSQLQSQLHQVQLELDS 269
Query: 105 VK--LDTE 88
V+ LD E
Sbjct: 270 VRTALDEE 277
>X08068-1|CAA30857.1| 882|Caenorhabditis elegans paramyosin
protein.
Length = 882
Score = 28.7 bits (61), Expect = 5.8
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Frame = -2
Query: 279 SDILAEVHTIIQRVKLP--PEVLVSLLIKMSDAEARLASGSSERVELAALIASFQIARDQ 106
+D+L EVH Q+V+L V +L ++ +A RL ER +L + + Q+ D
Sbjct: 228 NDLLKEVHD--QKVQLDNLQHVKYTLAQQLEEARRRLEDAERERSQLQSQLHQVQLELDS 285
Query: 105 VK--LDTE 88
V+ LD E
Sbjct: 286 VRTALDEE 293
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,292,076
Number of Sequences: 27780
Number of extensions: 355976
Number of successful extensions: 951
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 905
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 948
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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