Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_pT_E21
         (861 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U97669-1|AAB91371.1| 2321|Homo sapiens Notch3 protein.                 31   4.1  
AF058900-1|AAC14346.1| 2321|Homo sapiens Notch3 protein.               31   4.1  
AC004663-1|AAC15789.1| 2281|Homo sapiens Notch 3 protein.              31   4.1  
AB209447-1|BAD92684.1| 1289|Homo sapiens Notch homolog 3 variant...    31   4.1  
BC126390-1|AAI26391.1|  630|Homo sapiens zinc finger protein 37 ...    30   9.4  
AL162588-1|CAI13578.1|  630|Homo sapiens zinc finger protein 37 ...    30   9.4  
AF022158-1|AAC28425.1|  630|Homo sapiens KRAB domain zinc finger...    30   9.4  

>U97669-1|AAB91371.1| 2321|Homo sapiens Notch3 protein.
          Length = 2321

 Score = 31.5 bits (68), Expect = 4.1
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +2

Query: 674 TYNPRIKSFYCIH*LKRTKLLCDIDDVTTTYP 769
           T + R+ SFYC   + +T LLC +DD   + P
Sbjct: 328 TCHDRVASFYCACPMGKTGLLCHLDDACVSNP 359


>AF058900-1|AAC14346.1| 2321|Homo sapiens Notch3 protein.
          Length = 2321

 Score = 31.5 bits (68), Expect = 4.1
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +2

Query: 674 TYNPRIKSFYCIH*LKRTKLLCDIDDVTTTYP 769
           T + R+ SFYC   + +T LLC +DD   + P
Sbjct: 328 TCHDRVASFYCACPMGKTGLLCHLDDACVSNP 359


>AC004663-1|AAC15789.1| 2281|Homo sapiens Notch 3 protein.
          Length = 2281

 Score = 31.5 bits (68), Expect = 4.1
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +2

Query: 674 TYNPRIKSFYCIH*LKRTKLLCDIDDVTTTYP 769
           T + R+ SFYC   + +T LLC +DD   + P
Sbjct: 288 TCHDRVASFYCACPMGKTGLLCHLDDACVSNP 319


>AB209447-1|BAD92684.1| 1289|Homo sapiens Notch homolog 3 variant
           protein.
          Length = 1289

 Score = 31.5 bits (68), Expect = 4.1
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = +2

Query: 674 TYNPRIKSFYCIH*LKRTKLLCDIDDVTTTYP 769
           T + R+ SFYC   + +T LLC +DD   + P
Sbjct: 331 TCHDRVASFYCACPMGKTGLLCHLDDACVSNP 362


>BC126390-1|AAI26391.1|  630|Homo sapiens zinc finger protein 37
           homolog (mouse) protein.
          Length = 630

 Score = 30.3 bits (65), Expect = 9.4
 Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 5/75 (6%)
 Frame = +3

Query: 462 HPSN*NALLLHVRNRQGDGIYPCR---LARRPNTIIISSLRTH**KGFQYPTEYILCKRA 632
           H SN   L+ HVR+  G+  Y C+    + R N+ +   +RTH   G + P E   C +A
Sbjct: 388 HSSN---LIQHVRSHTGEKPYECKECGKSFRYNSSLTEHVRTH--TG-EIPYECNECGKA 441

Query: 633 FPYSRLL--YSRIFT 671
           F YS  L  + RI T
Sbjct: 442 FKYSSSLTKHMRIHT 456


>AL162588-1|CAI13578.1|  630|Homo sapiens zinc finger protein 37
           homolog (mouse) protein.
          Length = 630

 Score = 30.3 bits (65), Expect = 9.4
 Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 5/75 (6%)
 Frame = +3

Query: 462 HPSN*NALLLHVRNRQGDGIYPCR---LARRPNTIIISSLRTH**KGFQYPTEYILCKRA 632
           H SN   L+ HVR+  G+  Y C+    + R N+ +   +RTH   G + P E   C +A
Sbjct: 388 HSSN---LIQHVRSHTGEKPYECKECGKSFRYNSSLTEHVRTH--TG-EIPYECNECGKA 441

Query: 633 FPYSRLL--YSRIFT 671
           F YS  L  + RI T
Sbjct: 442 FKYSSSLTKHMRIHT 456


>AF022158-1|AAC28425.1|  630|Homo sapiens KRAB domain zinc finger
           protein protein.
          Length = 630

 Score = 30.3 bits (65), Expect = 9.4
 Identities = 27/75 (36%), Positives = 38/75 (50%), Gaps = 5/75 (6%)
 Frame = +3

Query: 462 HPSN*NALLLHVRNRQGDGIYPCR---LARRPNTIIISSLRTH**KGFQYPTEYILCKRA 632
           H SN   L+ HVR+  G+  Y C+    + R N+ +   +RTH   G + P E   C +A
Sbjct: 388 HSSN---LIQHVRSHTGEKPYECKECGKSFRYNSSLTEHVRTH--TG-EIPYECNECGKA 441

Query: 633 FPYSRLL--YSRIFT 671
           F YS  L  + RI T
Sbjct: 442 FKYSSSLTKHMRIHT 456


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,703,680
Number of Sequences: 237096
Number of extensions: 2353227
Number of successful extensions: 3363
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3255
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3363
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10984231046
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)