Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_pT_E21
         (861 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholi...    23   2.7  
DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholi...    23   2.7  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    23   4.8  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    23   4.8  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    23   4.8  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    23   4.8  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   6.3  

>DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = -1

Query: 186 RPVSDLLKNFSR*VRVGDGVSNVINVC 106
           R   DLL N+++ VR     S+V+ VC
Sbjct: 31  RLYDDLLSNYNKLVRPVVNTSDVLRVC 57


>DQ026033-1|AAY87892.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = -1

Query: 186 RPVSDLLKNFSR*VRVGDGVSNVINVC 106
           R   DLL N+++ VR     S+V+ VC
Sbjct: 31  RLYDDLLSNYNKLVRPVVNTSDVLRVC 57


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +3

Query: 525 PCRLARRPNTIIISSL 572
           PC+L RR   +I SSL
Sbjct: 187 PCQLTRRQGYVIYSSL 202


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +3

Query: 525 PCRLARRPNTIIISSL 572
           PC+L RR   +I SSL
Sbjct: 187 PCQLTRRQGYVIYSSL 202


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +1

Query: 316 SVLFYSLDVWTNSRPTW 366
           S+L+Y  DV T   P W
Sbjct: 112 SLLYYEFDVATKEPPPW 128


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +3

Query: 525 PCRLARRPNTIIISSL 572
           PC+L RR   +I SSL
Sbjct: 187 PCQLTRRQGYVIYSSL 202


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 12/33 (36%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
 Frame = +3

Query: 120  HY--LHRLQLAPSD*SFSTDQKLVLILTLKKHQ 212
            HY  LH L   P+D   + D KL++  + +K Q
Sbjct: 1469 HYPDLHNLYAVPTDKKSACDSKLIVDHSSQKTQ 1501


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 242,497
Number of Sequences: 438
Number of extensions: 4832
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27795333
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)