Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_pT_E07
         (461 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR prot...    23   3.9  
X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.             22   9.1  

>AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR
           protein.
          Length = 502

 Score = 23.4 bits (48), Expect = 3.9
 Identities = 29/118 (24%), Positives = 52/118 (44%), Gaps = 6/118 (5%)
 Frame = -2

Query: 415 LHNFVLYLLDLLYPDTIIVTLILFCNFIRTVFCFKIFRN*TT---AMARNIKDNN---NI 254
           + NF+ ++L  + P TIIV L        TV+ F   R   T   +   N++++    NI
Sbjct: 283 MFNFLDFILVFVVPFTIIVVLNTITAL--TVWKFASIRRTMTIPRSYGTNVRESRRQLNI 340

Query: 253 DPATLLSNVKSTIKKDVIKELLENHFQESKTKIAPHALMLLADVAKCLVTETCLRAVK 80
             + L  N   T+    I+    +    S+ K+    L++++ V  CL   + +  VK
Sbjct: 341 SSSQLFGN--GTVPVQQIQLYSRSRVANSQIKVT-KMLLIVSTVFVCLNLPSYIVRVK 395


>X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.
          Length = 1231

 Score = 22.2 bits (45), Expect = 9.1
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -3

Query: 135  CWQMWPNVWSPRHAC 91
            C+Q WP+  S R+ C
Sbjct: 1073 CFQYWPHERSVRYQC 1087


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 430,448
Number of Sequences: 2352
Number of extensions: 7298
Number of successful extensions: 7
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 39969834
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)