Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_pT_E07
         (461 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-2795|AAF55769.2|  408|Drosophila melanogaster CG17916-P...    29   2.3  
AY071297-1|AAL48919.1|  223|Drosophila melanogaster RE32705p pro...    27   9.3  
AE014296-1551|AAN11977.1|  215|Drosophila melanogaster CG5021-PB...    27   9.3  
AE014296-1550|AAF50344.2|  218|Drosophila melanogaster CG5021-PA...    27   9.3  

>AE014297-2795|AAF55769.2|  408|Drosophila melanogaster CG17916-PA
           protein.
          Length = 408

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 5/48 (10%)
 Frame = -2

Query: 430 ERIQYLHNFVLY---LLDLLYPDTIIVTLILFCNFIRT--VFCFKIFR 302
           E I+YLHN V+Y    LDL      I + ++  NFI    V CF  F+
Sbjct: 255 ENIKYLHNLVVYHARALDLSEEVNNIFSFLILWNFIAASLVICFAGFQ 302


>AY071297-1|AAL48919.1|  223|Drosophila melanogaster RE32705p
           protein.
          Length = 223

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 14/27 (51%), Positives = 19/27 (70%)
 Frame = +3

Query: 153 AILVLLSWKWFSNSSFITSFLIVLFTL 233
           AIL+ +   WFS+ SFITSF+ V+  L
Sbjct: 51  AILIYMFCGWFSD-SFITSFVFVVLFL 76


>AE014296-1551|AAN11977.1|  215|Drosophila melanogaster CG5021-PB,
           isoform B protein.
          Length = 215

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 14/27 (51%), Positives = 19/27 (70%)
 Frame = +3

Query: 153 AILVLLSWKWFSNSSFITSFLIVLFTL 233
           AIL+ +   WFS+ SFITSF+ V+  L
Sbjct: 48  AILIYMFCGWFSD-SFITSFVFVVLFL 73


>AE014296-1550|AAF50344.2|  218|Drosophila melanogaster CG5021-PA,
           isoform A protein.
          Length = 218

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 14/27 (51%), Positives = 19/27 (70%)
 Frame = +3

Query: 153 AILVLLSWKWFSNSSFITSFLIVLFTL 233
           AIL+ +   WFS+ SFITSF+ V+  L
Sbjct: 51  AILIYMFCGWFSD-SFITSFVFVVLFL 76


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,010,401
Number of Sequences: 53049
Number of extensions: 311368
Number of successful extensions: 721
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 703
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 721
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1539014778
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)