Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_pT_E07
         (461 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   2.8  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   4.9  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    21   6.5  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   6.5  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   6.5  
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    21   6.5  
AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    21   6.5  
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     21   8.5  
DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride...    21   8.5  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       21   8.5  

>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -2

Query: 295 TTAMARNIKDNNNIDPATLLSNVKST 218
           T + +   +D   +DP  ++SN KST
Sbjct: 430 TASGSNEDEDETPLDPVVVISNDKST 455


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
            protein.
          Length = 1143

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 11/22 (50%), Positives = 11/22 (50%)
 Frame = +2

Query: 83   DCTQACLGDQTFGHICQQHKXM 148
            DCT A    QT  HI Q H  M
Sbjct: 1074 DCTMAEDVYQTLKHIIQTHGEM 1095


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +3

Query: 114 HLATSANNIXACGAILVLLSWKWFSNSSF 200
           ++ TS       G    +L+W  +SNS+F
Sbjct: 292 NIVTSYCKTCISGRAFQVLTWLGYSNSAF 320


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 8/22 (36%), Positives = 12/22 (54%), Gaps = 1/22 (4%)
 Frame = -3

Query: 168 VKP-RLPHMXLCCWQMWPNVWS 106
           ++P RLP     CW++    WS
Sbjct: 819 IRPERLPSFDDECWRLMEQCWS 840


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 8/22 (36%), Positives = 12/22 (54%), Gaps = 1/22 (4%)
 Frame = -3

Query: 168 VKP-RLPHMXLCCWQMWPNVWS 106
           ++P RLP     CW++    WS
Sbjct: 857 IRPERLPSFDDECWRLMEQCWS 878


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 8/25 (32%), Positives = 17/25 (68%)
 Frame = -2

Query: 286 MARNIKDNNNIDPATLLSNVKSTIK 212
           + RN++ ++ +D  TLL++   +IK
Sbjct: 146 LIRNLRQSSALDGVTLLADNSVSIK 170


>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 10/23 (43%), Positives = 11/23 (47%)
 Frame = -1

Query: 371 YNNCYTNTIL*FYTNCILL*NIP 303
           YNN Y N     Y N I +  IP
Sbjct: 343 YNNNYNNNCKKLYYNIINIEQIP 365


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 7/13 (53%), Positives = 7/13 (53%)
 Frame = +3

Query: 174 WKWFSNSSFITSF 212
           W W S SSF   F
Sbjct: 414 WMWLSCSSFFQQF 426


>DQ667190-1|ABG75742.1|  509|Apis mellifera pH-sensitive chloride
           channel variant 1 protein.
          Length = 509

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 6/19 (31%), Positives = 9/19 (47%)
 Frame = -3

Query: 174 KKVKPRLPHMXLCCWQMWP 118
           K++ P +     CC   WP
Sbjct: 76  KRLLPPVQDADFCCGMRWP 94


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +2

Query: 71  LCLFDCTQACLGDQTFG 121
           L LF CT +C+    +G
Sbjct: 301 LFLFACTNSCMNPIVYG 317


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,203
Number of Sequences: 438
Number of extensions: 2023
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12312900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)