Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_pT_D24
(390 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1687.06c |rpl44|rpl28|60S ribosomal protein L28/L44|Schizosa... 72 4e-14
SPAC1751.01c |gti1||gluconate transporter inducer Gti1|Schizosac... 31 0.083
SPAC22F8.11 |plc1||phosphoinositide phospholipase C Plc1|Schizos... 26 1.8
SPBC337.12 |||human ZC3H3 homolog|Schizosaccharomyces pombe|chr ... 26 2.4
SPCC663.01c |ekc1|SPCC777.16c|protein phosphatase regulatory sub... 25 5.5
SPBC17A3.06 |||phosphoprotein phosphatase|Schizosaccharomyces po... 25 5.5
SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein ... 24 7.2
SPCC1682.11c |||DUF580 family protein|Schizosaccharomyces pombe|... 24 7.2
SPBC29A10.08 |||1,3-beta-glucanosyltransferase |Schizosaccharomy... 24 7.2
SPAC31A2.06 |||conserved fungal protein|Schizosaccharomyces pomb... 24 9.5
SPBC13A2.02 |||nucleoporin Nup82|Schizosaccharomyces pombe|chr 2... 24 9.5
SPBPB8B6.03 ||SPAPB8B6.03, SPAPB8B6.03|acetamidase |Schizosaccha... 24 9.5
>SPAC1687.06c |rpl44|rpl28|60S ribosomal protein
L28/L44|Schizosaccharomyces pombe|chr 1|||Manual
Length = 134
Score = 71.7 bits (168), Expect = 4e-14
Identities = 49/119 (41%), Positives = 66/119 (55%), Gaps = 3/119 (2%)
Frame = -2
Query: 383 ICNNNAFLVKKRNIKK-PFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRKGFTVVYKK 207
I +NN FLVK+ F++EP NV+ ++ R++GL + KAVGV N R +
Sbjct: 12 IRDNNRFLVKRPEFGGIQFNREPVNVSGKNAQRFSGLCNDKAVGVQANSPRGVVLITKTN 71
Query: 206 AKATRKPAKNLIRRPFKAGA-RRSLYK-VKRLLKANHYRTDLCKATLRRASAILRSQRP 36
K +KPAK L R+ A A R YK + + YR DL K ++ RASAIL SQRP
Sbjct: 72 PKNAQKPAK-LFRKDVIANASSRKTYKSIAGRIGRTGYRDDLVKVSVARASAILSSQRP 129
>SPAC1751.01c |gti1||gluconate transporter inducer
Gti1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 30.7 bits (66), Expect = 0.083
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = +3
Query: 213 VHYCESLPVRVLHDTNGFLVNQAVVPEGVEVSHIVRLLAERLFDIALLH 359
+HYC S + LHDT LV G + S +++ + D L H
Sbjct: 251 IHYCSSSSLSYLHDTERALVGSLTDSYGFKKSGLIKKTISLMIDGRLHH 299
>SPAC22F8.11 |plc1||phosphoinositide phospholipase C
Plc1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 899
Score = 26.2 bits (55), Expect = 1.8
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +3
Query: 3 GCGCLSLFCFDGPLG 47
GC C+ + C+DGP G
Sbjct: 481 GCKCIEIDCWDGPNG 495
>SPBC337.12 |||human ZC3H3 homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 377
Score = 25.8 bits (54), Expect = 2.4
Identities = 18/69 (26%), Positives = 28/69 (40%), Gaps = 1/69 (1%)
Frame = -2
Query: 377 NNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHK-KAVGVVENPDRKGFTVVYKKAK 201
NN ++L+KK+ K P+ V + NG+ K A V P RK + +
Sbjct: 185 NNKSYLLKKKRFLKEVGNSPSAV-YCRYYNANGICGKGAACRFVHEPTRKTICPKFLNGR 243
Query: 200 ATRKPAKNL 174
+ NL
Sbjct: 244 CNKAEDCNL 252
>SPCC663.01c |ekc1|SPCC777.16c|protein phosphatase regulatory
subunit Ekc1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 838
Score = 24.6 bits (51), Expect = 5.5
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +1
Query: 256 PTAFL*IKPLYLKEWRLVTLFGSLLN 333
PT+F IKPL + +R+ L+ LL+
Sbjct: 347 PTSFGKIKPLGFERFRICELYAELLH 372
>SPBC17A3.06 |||phosphoprotein phosphatase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 330
Score = 24.6 bits (51), Expect = 5.5
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = -1
Query: 273 SQESRWCRGEP*QEGIHSSVQESKGY 196
S +S W +P + IHSSVQE++G+
Sbjct: 2 SNKSAW---QPQFDEIHSSVQEAEGF 24
>SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein
Lsb1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 296
Score = 24.2 bits (50), Expect = 7.2
Identities = 12/38 (31%), Positives = 17/38 (44%)
Frame = -1
Query: 141 VTVQSEEVVKG*PLPHRPMQGYPSSCFSHPPLPEAHQS 28
V + + VK P P P Q YP + S P + Q+
Sbjct: 194 VRLLEDSAVKAQPPPPPPQQNYPPAASSSAPPMQYQQT 231
>SPCC1682.11c |||DUF580 family protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 574
Score = 24.2 bits (50), Expect = 7.2
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +2
Query: 203 LLSCTLL*IPSCQGSP 250
LL C+++ I SCQG P
Sbjct: 542 LLICSIIDISSCQGDP 557
>SPBC29A10.08 |||1,3-beta-glucanosyltransferase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 459
Score = 24.2 bits (50), Expect = 7.2
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -2
Query: 347 NIKKPFSKEPNNVTNLHSFRYNGLI 273
N+KK ++ N+T HS+ NG I
Sbjct: 323 NLKKQWASISPNITYKHSYNPNGTI 347
>SPAC31A2.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 542
Score = 23.8 bits (49), Expect = 9.5
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = -2
Query: 164 PFKAGARRSLYKVKRLLKANHYRTDL 87
P GA L V LLK +Y TDL
Sbjct: 81 PIPKGAPNFLADVLNLLKKKYYATDL 106
>SPBC13A2.02 |||nucleoporin Nup82|Schizosaccharomyces pombe|chr
2|||Manual
Length = 803
Score = 23.8 bits (49), Expect = 9.5
Identities = 9/29 (31%), Positives = 17/29 (58%)
Frame = -2
Query: 383 ICNNNAFLVKKRNIKKPFSKEPNNVTNLH 297
+ NNN ++V + +I+ P+S + LH
Sbjct: 422 LSNNNPYMVLQPDIQSPYSLIAYHANGLH 450
>SPBPB8B6.03 ||SPAPB8B6.03, SPAPB8B6.03|acetamidase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 547
Score = 23.8 bits (49), Expect = 9.5
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -2
Query: 320 PNNVTNLHSFRYNGL 276
P V+NLH + YN L
Sbjct: 186 PQTVSNLHGYTYNAL 200
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,549,181
Number of Sequences: 5004
Number of extensions: 29821
Number of successful extensions: 92
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 91
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 91
length of database: 2,362,478
effective HSP length: 66
effective length of database: 2,032,214
effective search space used: 128029482
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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