Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P06_pT_D22
         (724 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.              27   0.78 
AJ439353-5|CAD27927.1|  459|Anopheles gambiae putative G-protein...    25   1.8  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    25   2.4  
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            25   2.4  
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    25   3.1  
AF510715-1|AAP47144.1|  470|Anopheles gambiae Rh-like glycoprote...    24   4.1  
AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeot...    24   5.5  

>M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.
          Length = 613

 Score = 26.6 bits (56), Expect = 0.78
 Identities = 14/73 (19%), Positives = 35/73 (47%)
 Frame = -2

Query: 648 ERRDQLRAQQPDLGFAELTRQLASEWSRLPAEEKQQYLDAADQDKERYVKECAEYKRTNA 469
           +++ Q + QQ      +  R    EW +   +++QQ+     Q ++R  ++  +++R   
Sbjct: 235 QQQQQQQQQQQQQQQQQQQRNQQREWQQ--QQQQQQHQQREQQQQQRVQQQNQQHQRQQQ 292

Query: 468 YKEFTKQQSDLQD 430
            ++  +QQ   Q+
Sbjct: 293 QQQQQRQQQQQQE 305


>AJ439353-5|CAD27927.1|  459|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 459

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = -3

Query: 500 KNVRNTKEQMLIKSSQNNNLI 438
           +NVRNTK  +++K    N+LI
Sbjct: 85  RNVRNTKHALMLKCLLTNDLI 105


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskeletal
            structural protein protein.
          Length = 1645

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 12/41 (29%), Positives = 22/41 (53%)
 Frame = -2

Query: 630  RAQQPDLGFAELTRQLASEWSRLPAEEKQQYLDAADQDKER 508
            RA  P+L   ++    A+ + +LP  + QQ   A+D  K++
Sbjct: 1159 RANMPELNMKQILDYKAAYFGKLPKHQHQQ--QASDDQKKK 1197


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = -2

Query: 546  QQYLDAADQDKERYVKECAEYKRTNAYKEFTKQQSDLQDGS 424
            Q+YL   D  ++R+   CA Y  +NA      Q +D    S
Sbjct: 933  QEYLKTYDFVRDRHKIRCASYVSSNATVVPATQPADASQAS 973


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 12/48 (25%), Positives = 25/48 (52%)
 Frame = -2

Query: 558 AEEKQQYLDAADQDKERYVKECAEYKRTNAYKEFTKQQSDLQDGSLSK 415
           A+E++  LD A      +V++CA+       ++  +Q+  + DG  +K
Sbjct: 324 ADERKTELDEAKVMLAAFVQDCADSATALGSEDQVRQEISVLDGKEAK 371


>AF510715-1|AAP47144.1|  470|Anopheles gambiae Rh-like glycoprotein
           protein.
          Length = 470

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +3

Query: 549 FLQLEVYSTR*LTVWSILQNPN 614
           F  +E Y T   T++  +QNPN
Sbjct: 359 FASVETYGTSLATIFPAMQNPN 380


>AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeotic
           protein protein.
          Length = 308

 Score = 23.8 bits (49), Expect = 5.5
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = +1

Query: 52  CNFSMYSSILSSVAPVGPPGKANV 123
           C+     S+++S  P+G PG A++
Sbjct: 29  CSSRYTDSVMNSYPPMGVPGSASI 52


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 622,425
Number of Sequences: 2352
Number of extensions: 10838
Number of successful extensions: 49
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 73597131
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)