Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_pT_D21
(387 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF101312-3|AAC69219.1| 83|Caenorhabditis elegans Ribosomal pro... 148 2e-36
U23517-8|AAM98041.1| 605|Caenorhabditis elegans A kinase anchor... 31 0.37
U23517-7|AAM98040.1| 1284|Caenorhabditis elegans A kinase anchor... 31 0.37
AC024200-2|AAF35997.2| 189|Caenorhabditis elegans Hypothetical ... 29 1.1
Z70312-2|CAA94386.2| 396|Caenorhabditis elegans Hypothetical pr... 28 2.6
U58751-7|AAB00658.2| 729|Caenorhabditis elegans Hepatocyte grow... 28 2.6
AL132948-45|CAD31822.2| 542|Caenorhabditis elegans Hypothetical... 27 4.6
Z81529-12|CAB04303.1| 492|Caenorhabditis elegans Hypothetical p... 27 6.1
AL023816-5|CAA19434.1| 492|Caenorhabditis elegans Hypothetical ... 27 6.1
>AF101312-3|AAC69219.1| 83|Caenorhabditis elegans Ribosomal
protein, small subunitprotein 27 protein.
Length = 83
Score = 148 bits (358), Expect = 2e-36
Identities = 63/83 (75%), Positives = 72/83 (86%)
Frame = -1
Query: 333 MPLAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCS 154
MPLA+DLLHP P E R HKLKRLV HPNSYFMDVKC GC+KI+TVFSHA VVVC GC+
Sbjct: 1 MPLAVDLLHPEPQREIRCHKLKRLVQHPNSYFMDVKCSGCFKISTVFSHATTVVVCVGCN 60
Query: 153 TILCQPTGGRARLTEGCAFRRKQ 85
T+LCQPT G+A+LTEGC+FR+KQ
Sbjct: 61 TVLCQPTRGKAKLTEGCSFRKKQ 83
>U23517-8|AAM98041.1| 605|Caenorhabditis elegans A kinase anchor
protein protein1, isoform c protein.
Length = 605
Score = 30.7 bits (66), Expect = 0.37
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = -1
Query: 303 SPASERRKHKLKRLVPHPNSYFM-DVKCPGCYKITTVFSHAQRVVVCAGCSTILC 142
+P ERR + + + + Y++ D +CP C T F+ R C C +LC
Sbjct: 517 TPRRERRLTESELQLGKTSPYWIPDSECPNCMLCNTRFTIITRRHHCRACGRVLC 571
>U23517-7|AAM98040.1| 1284|Caenorhabditis elegans A kinase anchor
protein protein1, isoform b protein.
Length = 1284
Score = 30.7 bits (66), Expect = 0.37
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = -1
Query: 303 SPASERRKHKLKRLVPHPNSYFM-DVKCPGCYKITTVFSHAQRVVVCAGCSTILC 142
+P ERR + + + + Y++ D +CP C T F+ R C C +LC
Sbjct: 517 TPRRERRLTESELQLGKTSPYWIPDSECPNCMLCNTRFTIITRRHHCRACGRVLC 571
>AC024200-2|AAF35997.2| 189|Caenorhabditis elegans Hypothetical
protein Y71F9AL.10 protein.
Length = 189
Score = 29.1 bits (62), Expect = 1.1
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = -1
Query: 312 LHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVC 166
LH +P H +R VP + MD+KCP C+K+ +V+C
Sbjct: 81 LHATPGRLHGHHS-RRSVP---VFMMDMKCPVCHKVVPSDDADIHLVMC 125
>Z70312-2|CAA94386.2| 396|Caenorhabditis elegans Hypothetical
protein ZC168.3 protein.
Length = 396
Score = 27.9 bits (59), Expect = 2.6
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = -1
Query: 384 MNSAGRCLFRLCIKAVTMPLAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCY 211
+ SA CL + I +P+ ++ P+P+ E K + R P N+ F+ V C +
Sbjct: 139 VTSAPSCLNQYHINLSHLPV-VEFHIPAPSVETTKVLISRANPKINAQFLHVACQSLF 195
>U58751-7|AAB00658.2| 729|Caenorhabditis elegans Hepatocyte growth
factor-regulatedtk substrate (hrs) family protein 1
protein.
Length = 729
Score = 27.9 bits (59), Expect = 2.6
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = -1
Query: 222 PGCYKITTVFSHAQRVVVCAGCSTILCQPTGGR 124
P CY+ +VFS R C C I C R
Sbjct: 161 PECYRCRSVFSVFTRKHHCRACGQIFCDKCSSR 193
>AL132948-45|CAD31822.2| 542|Caenorhabditis elegans Hypothetical
protein Y39B6A.25 protein.
Length = 542
Score = 27.1 bits (57), Expect = 4.6
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = -1
Query: 369 RCLFRLCIKAVTMPLAIDLLHPSPA 295
+ LFR+ IK+V P IDL HP+ A
Sbjct: 214 QALFRVEIKSVDEPHLIDLYHPTIA 238
>Z81529-12|CAB04303.1| 492|Caenorhabditis elegans Hypothetical
protein T05G11.1 protein.
Length = 492
Score = 26.6 bits (56), Expect = 6.1
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +3
Query: 15 TPXSNWKKNLKIKSGSVQALNVNVVFF*KHILQ 113
TP ++KKNLKI + +VQ L N +F + + Q
Sbjct: 440 TPRMDFKKNLKICTDAVQILVGNGLFSNEQLAQ 472
>AL023816-5|CAA19434.1| 492|Caenorhabditis elegans Hypothetical
protein T05G11.1 protein.
Length = 492
Score = 26.6 bits (56), Expect = 6.1
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +3
Query: 15 TPXSNWKKNLKIKSGSVQALNVNVVFF*KHILQ 113
TP ++KKNLKI + +VQ L N +F + + Q
Sbjct: 440 TPRMDFKKNLKICTDAVQILVGNGLFSNEQLAQ 472
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,776,589
Number of Sequences: 27780
Number of extensions: 160786
Number of successful extensions: 339
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 338
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 339
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 576961812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -