Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P06_pT_D20
(959 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit... 229 4e-61
SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit ... 132 5e-32
SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit... 123 3e-29
SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subu... 118 1e-27
SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit ... 116 5e-27
SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subuni... 105 7e-24
SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit C... 105 9e-24
SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit C... 75 1e-14
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 27 5.2
SPCC1450.16c |||triacylglycerol lipase|Schizosaccharomyces pombe... 26 9.1
>SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit Cct8
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 546
Score = 229 bits (560), Expect = 4e-61
Identities = 104/260 (40%), Positives = 164/260 (63%), Gaps = 1/260 (0%)
Frame = -2
Query: 952 IXDISDSGVKVIVAGAKFGDMAXHFLXKYNIMAVRLNSKFDIRRLAKXXXXXXXXXXXXX 773
I +I D+GV+V+V D+ H+L ++ I+ +R+ SKF++RRL +
Sbjct: 280 IKEIYDAGVRVVVTSGNVNDLVLHYLNRFEILVIRVPSKFELRRLCRVVGATPLARMGVP 339
Query: 772 XTQELGYCDAVHVDEVGDTRVVVFKMESSESRISTIVIRGSTDNYMDDIERAIDDGVNTF 593
+E+G D V E+G RV VF+ +R +TIV+RG+T Y+DD+ERAIDDGVN
Sbjct: 340 MPEEMGSVDVVETIEIGGDRVTVFRQVEDITRTATIVLRGATKTYLDDLERAIDDGVNIV 399
Query: 592 KGIARDGRFVPGAGATEIELAQQLLEFADTLPGLEQYAVRKFAVALESIPRALADNSGAN 413
K + +D R + GAGA++++L +L+ + PG+ Q+A++++ A E +PR +++N+G +
Sbjct: 400 KALVKDNRLIFGAGASDMQLCIRLISVGEKTPGIYQHAIKQYGEAFEVVPRTISENAGLD 459
Query: 412 ATEVVNKIYKA-HKEGQKNAGFDIDSENNGVCDAKEKGIIDSYLLKFWGIKYAVGAATTI 236
T+V++K+Y A HKE ++ G D++ EN+G DAKE GI D L K I+ A T+
Sbjct: 460 PTDVISKLYAAHHKENGESIGVDVECENDGTLDAKEAGIFDVLLAKKSAIRLATETVLTV 519
Query: 235 LKVDQIIMAKRAGGPKPRAP 176
L VDQ++M+K AGGPKP P
Sbjct: 520 LNVDQVVMSKPAGGPKPPGP 539
>SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit
Cct7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 558
Score = 132 bits (320), Expect = 5e-32
Identities = 77/256 (30%), Positives = 135/256 (52%)
Frame = -2
Query: 934 SGVKVIVAGAKFGDMAXHFLXKYNIMAVRLNSKFDIRRLAKXXXXXXXXXXXXXXTQELG 755
+G KV+++ GD+A + +I + D+ R+ + + LG
Sbjct: 289 TGAKVVLSKLPIGDLATQYFADRDIFCAGRVAADDLNRVVQAVGGSIQSTCSNIEEKHLG 348
Query: 754 YCDAVHVDEVGDTRVVVFKMESSESRISTIVIRGSTDNYMDDIERAIDDGVNTFKGIARD 575
CD ++G R +F+ +++ T+++RG D ++ ++ER++ D + K ++
Sbjct: 349 TCDTFEERQIGGDRFNLFE-GCPKAKTCTLILRGGADQFIAEVERSLHDAIMIVKHALKN 407
Query: 574 GRFVPGAGATEIELAQQLLEFADTLPGLEQYAVRKFAVALESIPRALADNSGANATEVVN 395
V G GA E+EL++ L +++ T+ G +Q + FA +LE IPR L DN+G ++T ++N
Sbjct: 408 NLVVAGGGACEMELSKYLRDYSLTISGKQQNFIAAFARSLEVIPRQLCDNAGFDSTNILN 467
Query: 394 KIYKAHKEGQKNAGFDIDSENNGVCDAKEKGIIDSYLLKFWGIKYAVGAATTILKVDQII 215
K+ H +G+ AG D+DSE GV + EK + + +K I A AAT IL VD+ I
Sbjct: 468 KLRMQHAKGEMWAGVDMDSE--GVANNFEKFVWEPSTVKSNAILSATEAATLILSVDETI 525
Query: 214 MAKRAGGPKPRAPAGS 167
K +P+AP G+
Sbjct: 526 --KNEPSQQPQAPQGA 539
>SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit
Cct3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 528
Score = 123 bits (297), Expect = 3e-29
Identities = 71/241 (29%), Positives = 122/241 (50%), Gaps = 1/241 (0%)
Frame = -2
Query: 922 VIVAGAKFGDMAXHFLXKYNIMAVRLNSKFDIRRLAKXXXXXXXXXXXXXXTQELGY-CD 746
+++ D+A H+L K NI A+R K D R+A+ +++G C
Sbjct: 287 LVITEKGVSDLAQHYLLKANITALRRTRKSDNNRIARACGANIVNRLEDLREKDVGTGCG 346
Query: 745 AVHVDEVGDTRVVVFKMESSESRISTIVIRGSTDNYMDDIERAIDDGVNTFKGIARDGRF 566
++D++GD F + TI++RG + + ++++ER + D + + + +
Sbjct: 347 LFYIDKLGD-EYYTFLTGCKNPKACTILLRGPSKDIINEVERNLQDAMAVARNVFFHPKL 405
Query: 565 VPGAGATEIELAQQLLEFADTLPGLEQYAVRKFAVALESIPRALADNSGANATEVVNKIY 386
PG GATE+ ++ +L E A ++ G+ Q+ R A A+E IPR L N GAN + + ++
Sbjct: 406 SPGGGATEMAVSVRLAEKARSIEGVAQWPYRAVADAIEIIPRTLVQNCGANPIKALTELR 465
Query: 385 KAHKEGQKNAGFDIDSENNGVCDAKEKGIIDSYLLKFWGIKYAVGAATTILKVDQIIMAK 206
H EGQ + F ID E V D E G+ + +K IK A+ +A +L+VD I+
Sbjct: 466 AKHAEGQHS--FGIDGETGRVVDMHEYGVWEPEAVKLQSIKTAIESACLLLRVDDIVSGV 523
Query: 205 R 203
R
Sbjct: 524 R 524
>SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subunit
Cct5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 546
Score = 118 bits (284), Expect = 1e-27
Identities = 75/251 (29%), Positives = 125/251 (49%), Gaps = 1/251 (0%)
Frame = -2
Query: 958 KQIXDISDSGVKVIVAGAKFGDMAXHFLXKYNIMAVRLNSKFDIRRLAKXXXXXXXXXXX 779
+ I + D+G +++ F D A H L + N+ AVR +I +A
Sbjct: 289 EMIKHVKDAGANLVICQWGFDDEANHLLLQNNLPAVRWVGGPEIELIAIATNGRIVPRFE 348
Query: 778 XXXTQELGYCDAVHVDEVGDTRVVVFKMES-SESRISTIVIRGSTDNYMDDIERAIDDGV 602
+ +LG V G TR + +E + SR T+ +RGS +D+ +RA+ D +
Sbjct: 349 DLSSDKLGSAGIVREVSFGTTRDKILVIEKCANSRAVTVFVRGSNKMIVDEAKRALHDAL 408
Query: 601 NTFKGIARDGRFVPGAGATEIELAQQLLEFADTLPGLEQYAVRKFAVALESIPRALADNS 422
+ + RD R V G GA EI + + + A+ +PG++QY++ FA AL++IP ALA+NS
Sbjct: 409 CVVRNLIRDNRVVYGGGAAEISCSLAVTKEAEKIPGIDQYSMGAFADALDTIPLALAENS 468
Query: 421 GANATEVVNKIYKAHKEGQKNAGFDIDSENNGVCDAKEKGIIDSYLLKFWGIKYAVGAAT 242
G ++ E + + KA + A ID G D +++ +ID + K + A
Sbjct: 469 GLSSIEALTAV-KARHVKENKAYLGIDCLQTGSNDMRKQFVIDPLIGKKQQLLLATQLCR 527
Query: 241 TILKVDQIIMA 209
+LKV+ II+A
Sbjct: 528 MVLKVNDIIVA 538
>SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit
Cct4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 527
Score = 116 bits (279), Expect = 5e-27
Identities = 65/230 (28%), Positives = 113/230 (49%)
Frame = -2
Query: 895 DMAXHFLXKYNIMAVRLNSKFDIRRLAKXXXXXXXXXXXXXXTQELGYCDAVHVDEVGDT 716
D+A HFL K IM ++ + ++ + K +LG+ D V
Sbjct: 300 DLALHFLAKLKIMVIKDIERDEVEFICKSTGCKPIADIESFAEDKLGHADLVEETSSSGE 359
Query: 715 RVVVFKMESSESRISTIVIRGSTDNYMDDIERAIDDGVNTFKGIARDGRFVPGAGATEIE 536
++V F + + +I+ RG+ +++ ER++ D + + + + + G G+ EIE
Sbjct: 360 KIVKFSGVKNAGKTVSILCRGANLLTLEEAERSLHDALCVIRCLVKQRALIAGGGSPEIE 419
Query: 535 LAQQLLEFADTLPGLEQYAVRKFAVALESIPRALADNSGANATEVVNKIYKAHKEGQKNA 356
AQ+LLE A L G E +R F+ ALE IP LA+N+G NA +VV ++ H G+K A
Sbjct: 420 AAQRLLEHARQLEGREAICIRAFSEALEIIPVTLAENAGLNAIQVVTELRSRHANGEKTA 479
Query: 355 GFDIDSENNGVCDAKEKGIIDSYLLKFWGIKYAVGAATTILKVDQIIMAK 206
G ++ V + E+ ++ L+ I+ A I+K+D I +A+
Sbjct: 480 GINV--RKGIVTNILEENVLQPLLVNISAIQLAAETTKMIMKIDDITLAR 527
>SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subunit
Cct1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 556
Score = 105 bits (253), Expect = 7e-24
Identities = 79/266 (29%), Positives = 126/266 (47%), Gaps = 18/266 (6%)
Frame = -2
Query: 958 KQIXDISDSGVKVIVAGAKFGDMAXHFLXKYNIMAVRLNSKFDIRRLAKXXXXXXXXXXX 779
+++ I ++G VI+ D+ + + MAVR K D+RR+AK
Sbjct: 278 ERVKKILNAGANVILTTKGIDDLCLKSIIEAGAMAVRRCKKEDLRRIAKASGATLLSSLS 337
Query: 778 XXXTQE------LGYCDAVHVDEVGDTRVVVFKMESSESRISTIVIRGSTDNYMDDIERA 617
+E LG + V ++ D ++ K + S S IV+RG + +D++ER+
Sbjct: 338 NLEGEETFESSYLGSAEEVVQEKFSDDECILVKGTKAYSSAS-IVLRGPNEYSLDEMERS 396
Query: 616 IDDGVNTFKGIARDGRFVPGAGATEIELAQQLLEFADTLPGLEQYAVRKFAVALESIPRA 437
+ D ++ K G+ VPG GA E L+ L FA +L EQ A+ +FA AL IPR
Sbjct: 397 MHDSLSVVKRTLESGKVVPGGGAVETALSIYLENFATSLGSREQLAIAEFAQALLIIPRT 456
Query: 436 LADNSGANATEVVNKIYKAH------------KEGQKNAGFDIDSENNGVCDAKEKGIID 293
LA N+ ++TE+ K+ H K G KN G D+ N + D + G+++
Sbjct: 457 LAVNAAKDSTELTAKLRAYHAASQNAEVTDVKKRGYKNYGLDL--LNGVIRDNVKAGVLE 514
Query: 292 SYLLKFWGIKYAVGAATTILKVDQII 215
+ K +K AV A IL++D I
Sbjct: 515 PSMSKLKSLKSAVEACIAILRIDTSI 540
>SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit
Cct2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 527
Score = 105 bits (252), Expect = 9e-24
Identities = 63/195 (32%), Positives = 105/195 (53%), Gaps = 1/195 (0%)
Frame = -2
Query: 763 ELGYCDAVHVDEVGDTRVVVFK-MESSESRISTIVIRGSTDNYMDDIERAIDDGVNTFKG 587
+LG+C + +G+ +++ F +E+ E+ TIV+RG+T +D+ ERAI D +
Sbjct: 338 KLGHCKKIEEIIIGEDKMIKFSGVEAGEA--CTIVLRGATHQLLDESERAIHDALAVLSQ 395
Query: 586 IARDGRFVPGAGATEIELAQQLLEFADTLPGLEQYAVRKFAVALESIPRALADNSGANAT 407
+ R G G E+ +A+ + E A PG + AV FA AL +P LADN+G +++
Sbjct: 396 TVAESRVTLGGGCAEMLMAKAVEEAATHEPGKKAVAVSAFAKALSQLPTILADNAGFDSS 455
Query: 406 EVVNKIYKAHKEGQKNAGFDIDSENNGVCDAKEKGIIDSYLLKFWGIKYAVGAATTILKV 227
E+V ++ AH +G G D+D + D + KGI+++ LK + A +L+V
Sbjct: 456 ELVAQLKAAHYDGNDTMGLDMD--EGEIADMRAKGILEALKLKQAVVSSGSEGAQLLLRV 513
Query: 226 DQIIMAKRAGGPKPR 182
D I+ A P+PR
Sbjct: 514 DTILKA----APRPR 524
>SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit
Cct6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 535
Score = 75.4 bits (177), Expect = 1e-14
Identities = 63/255 (24%), Positives = 112/255 (43%), Gaps = 2/255 (0%)
Frame = -2
Query: 958 KQIXDISDSGVKVIVAGAKFGDMAXHFLXKYNIMAVRLNSKFDIRRLAKXXXXXXXXXXX 779
K++ + + VI+ ++ L K IMA+R + ++ RL
Sbjct: 277 KEVCERDPTANFVIINQKGIDPLSLDVLAKNGIMALRRAKRRNMERLQLACGGVAQNSVD 336
Query: 778 XXXTQELGYCDAVHVDEVGDTRVVVFKMESSESRISTIVIRGSTDNYMDDIERAIDDGVN 599
+ LG+ +V+ +G+ + F + + + +TI+I G + I+ A DG+
Sbjct: 337 DLNPEVLGWAGSVYERTLGEEKYT-FVEDVKDPKSATILIHGPNTYTIQQIQDATRDGLR 395
Query: 598 TFKGIARDGRFVPGAGATEIELAQQLLE--FADTLPGLEQYAVRKFAVALESIPRALADN 425
K D + GAGA E+ A L A + G + V +A AL IP+ LA N
Sbjct: 396 AVKNAVEDNCLIVGAGAFEVACAAHLRNKFAAKEVKGKAKMGVYAYADALLIIPKTLAAN 455
Query: 424 SGANATEVVNKIYKAHKEGQKNAGFDIDSENNGVCDAKEKGIIDSYLLKFWGIKYAVGAA 245
S + + + + + EG K G D+ + D + +GI D+Y + + A A
Sbjct: 456 SSYDTQDAIVALQEEASEGYK-VGLDL--KTGMPFDPEVEGIYDNYRVIRHMLHSATVIA 512
Query: 244 TTILKVDQIIMAKRA 200
+ ++ VDQI+ A R+
Sbjct: 513 SNLISVDQILRAGRS 527
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 26.6 bits (56), Expect = 5.2
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +3
Query: 693 SILNTTTRVSPTSSTCTASQYPSS 764
S N+TT SPTSS+ T+S SS
Sbjct: 94 SSTNSTTSASPTSSSLTSSSATSS 117
>SPCC1450.16c |||triacylglycerol lipase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 513
Score = 25.8 bits (54), Expect = 9.1
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = +3
Query: 267 IPQNFKRY--ESIMPFSFASQTPLFSESISKPAFFCPSL 377
+P +R+ + +P ++ + TP FS S K AF PSL
Sbjct: 434 LPPRLRRFFVDDYVPSAYITLTPTFSFSDIKHAFTKPSL 472
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,731,408
Number of Sequences: 5004
Number of extensions: 75784
Number of successful extensions: 237
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 213
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 228
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 491307756
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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